Yersinia pestis D106004: YPD4_0470
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Entry
YPD4_0470 CDS
T01832
Name
(GenBank) AMP binding protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd00061
Fatty acid biosynthesis
ypd00071
Fatty acid degradation
ypd01100
Metabolic pathways
ypd01212
Fatty acid metabolism
ypd02024
Quorum sensing
Module
ypd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
YPD4_0470
00071 Fatty acid degradation
YPD4_0470
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPD4_0470
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ypd01004
]
YPD4_0470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ypd04147
]
YPD4_0470
Enzymes [BR:
ypd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
YPD4_0470
Lipid biosynthesis proteins [BR:
ypd01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
YPD4_0470
Exosome [BR:
ypd04147
]
Exosomal proteins
Exosomal proteins of breast milk
YPD4_0470
Exosomal proteins of breast cancer cells
YPD4_0470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
PDDEXK_12
Motif
Other DBs
NCBI-ProteinID:
ACY57379
LinkDB
All DBs
Position
577440..579206
Genome browser
AA seq
588 aa
AA seq
DB search
MRQQVSDRSELVAFREWSPEGEKQLNWQQIDEHVTRISTALLSLGAAIQERIGIFANNSM
AWSLVDLAILQLRGVSVPLYATNTAAQAAYIVNDADVRILFVGEQSQFDIAITLQPLCPQ
LAHIIVLDPAVDLRGCEYAQHLADFEQQQQPDTVQQHLLTTRIEGCDLDDLFTLIYTSGT
TGEPKGVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSHVFERAWSFYVMHTGAQNVY
IRNTDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHQRVLFHWAVGCGERKFK
RLQQGRPLPWLSEQMYTLADRLVLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNI
KYGYGMTETCATVSCWEEQNFRFGSIGKPLPGIDVRLGAENEIQVRGPIVMRGYFKKPQE
TLEAFTEDGWLKTGDAGALDAQGHLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQ
VAIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLKEIQKEL
ALFEQVKKFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDLMYSD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtcagcaagtcagtgaccgttcagagctggtagcctttcgtgaatggtcaccagag
ggtgaaaagcagctcaactggcagcaaattgacgagcatgtcactcggatttctactgca
ttgctctctttgggggctgcaatacaagagcgcattggcatctttgctaataacagtatg
gcgtggtcacttgtcgatctggctattttacagttacgtggcgttagtgtccccttgtat
gccaccaataccgccgctcaggcagcctatatcgtcaatgatgctgatgtgcggattttg
tttgtcggtgagcaatcccaatttgatattgccatcacgctgcaacctctctgcccgcaa
ctggctcatatcatcgtcttggatcctgcggtggacttacgtggctgtgagtacgcccag
catttggctgactttgagcagcaacagcaacccgataccgtacaacagcacctgttaact
acgcgcattgaaggctgtgatttagacgatctgtttacgctaatttatacgtcgggtacc
acgggggagccaaaaggcgtgatgttggattaccgtaatatggcagctcaactctatttg
catgaccagcggttaaccctcacaccacaagatgtgtccctcagttttttgccgttatct
catgtttttgaaagagcctggagtttctatgtgatgcataccggtgctcagaacgtctat
atccgtaatacggattgggtgcgctctgctatgcaggcagtaaaaccaacggtgatgtgc
gcggtgcctcgcttctacgagaaagtattcagcgcgattaatgacaaagtcgccttggca
aagtggcatcaacgcgtgctattccactgggcagtggggtgcggtgaacgtaaattcaaa
cggttgcagcaggggcggccattaccttggctctcagagcagatgtacacactggcagac
cgtttggtattgcgcaaattacgcggtgtgttaggggggcgggtacgttttctgcccgcg
gctggcgcacggttagatgataatatcattctgtttttccaggcgattggggtcaatatt
aaatacggctatggcatgactgaaacctgtgccacggtttcttgttgggaagagcaaaac
ttccgctttggttctatcggcaagcccttaccgggtattgatgttcgcttaggggcagag
aatgaaattcaggtgcgtgggcctatcgtgatgcgtggctatttcaaaaagccacaagag
acgctagaagcctttaccgaagacggatggcttaagacgggggatgcgggtgctctggat
gctcagggtcatctgtttattaccgaacgtctgaaagacctgatgaaaacgtcggggggg
aaatatattgccccacaaatgatcgaaggcacactcggacaggatcgttttattgagcag
gtagcgattattgcggatacccgcaaatttgtatcagcgttgattgtcccgagttttgaa
tcgctggaagagtatgcccgatccatcaacttgaaatatcacgatcggttggagctattg
cgccatagccacattgttaacatgtttgagcaacggctgaaagagatacaaaaagagctg
gctctgtttgagcaagtaaaaaagtttacgctgttgcctcaggcgttcactatggaaacc
ggtgagttaacgcctacgatgaagttgcggcggaaaatcattcttcaacgctatcagaat
gaaattgacttgatgtatagcgattaa
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