Yersinia pestis D106004: YPD4_3283
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Entry
YPD4_3283 CDS
T01832
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd00230
Purine metabolism
ypd01100
Metabolic pathways
ypd01110
Biosynthesis of secondary metabolites
Module
ypd_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
YPD4_3283 (purD)
Enzymes [BR:
ypd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
YPD4_3283 (purD)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp_3
ATP-grasp
ATP-grasp_4
RimK
ATP-grasp_2
tRNA_synt_1c_R1
ATP-grasp_5
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
ACY60187
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All DBs
Position
4169620..4170906
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AA seq
428 aa
AA seq
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MNILIIGNGGREHALGWKAAQSPLADKIYVAPGNAGTALEPTLENVDIAATDIAGLLAFA
QSHDIGLTIVGPEAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSA
EYQNFTDVEAALAYVRQKGAPIVIKADGLAAGKGVIVAMTQEEAETAVNDMLAGNAFGDA
GHRIVVEEFLDGEEASFIVMVDGENVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVT
DDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMISADGQPKVIEFNCRFGDPETQPIM
LRMRSDLVELCLAGTQGKLNEKTSDWDERPSLGVVLAAGGYPADYRQGDVIHGLPQQEVK
DGKVFHAGTKLNGNHEVVTNGGRVLCVTALGETVAQAQQYAYQLAEGIQWEGVFCRKDIG
YRAIARGK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttgataattggtaacggcggtcgtgaacacgctctgggctggaaagccgcc
caatctcctttagcggacaaaatttatgttgcaccaggtaatgcgggtacagcactggaa
ccgaccttagaaaatgttgatatcgccgccactgatattgccggtttactggcctttgct
caaagtcatgatatcggcctgacgattgttggcccagaagcccctttggtgatcggcgtg
gttgatgcgttccgcgctgctggtttagctatttttggcccgactcaggctgcggctcaa
ttagagggttctaaagccttcaccaaagatttcctggcccgtcacaacattccctctgcg
gaataccaaaactttacagatgtcgaggccgcattggcctatgtgcgtcaaaaaggtgcg
ccaatcgttatcaaagccgatggtctggccgccggtaaaggcgtgattgttgcgatgacg
caggaagaagccgaaaccgccgtgaatgatatgttggccggtaacgcttttggtgatgca
gggcaccgtatcgtggtggaagagttccttgatggcgaagaagccagctttatcgtgatg
gttgatggcgaaaatgttttgccaatggcgaccagtcaggatcataagcgagttggcgat
ggtgataccgggccaaataccggcggaatgggtgcttattccccagcccccgtggtaaca
gatgatgttcaccaacgggtcatggatcaggttatttggccgaccgtgcgtggtatggcg
gcggaaggtaatatttacaccggtttcctctatgctggcctgatgatttcagccgatggg
caacccaaagtcattgagttcaactgccgctttggcgatccagaaacgcagccaatcatg
ttgcgtatgcgctccgatttggtcgaactgtgtttagccggtacacaaggcaaactaaat
gaaaaaacctcagactgggatgagcgcccatcactgggggtcgttttagccgctggcggt
tatccagcagattaccgccagggtgatgttattcatggcttaccacagcaagaagtcaag
gatggaaaagtcttccacgcggggaccaagctgaatgggaatcatgaagttgtcaccaat
ggtggccgcgtcttgtgtgtcactgcactcggtgaaaccgtcgcgcaggcgcaacaatat
gcctatcagttagctgaggggatccagtgggaaggggttttctgccgtaaagatattggt
tatcgagcgattgctcgcggtaagtaa
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