KEGG   Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4028
Entry
YPC_4028          CDS       T01874                                 
Name
(GenBank) putative membrane protein precursor
  KO
K11891  type VI secretion system protein ImpL
Organism
yph  Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yph00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YPC_4028
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yph02044]
    YPC_4028
Secretion system [BR:yph02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   YPC_4028
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical AAA AAA_11 AAA_16
Other DBs
NCBI-ProteinID: ADW00457
LinkDB
Position
3890344..3893796
AA seq 1150 aa
MLYCVVDRAADRHWPLFPSGGVWVRKIIIALILFWALWPFVAIFFSWIFRYARAPLPKRK
KKTVQLDRVSARFHDAMLTLQHADLSSQKTRWQRWRQRRKRQYIDAKPWFLVMGPPGCGK
TSIVYESSEKFLLSEQYGLAQTTDIGPTQDCNWWLTDRAVYIDTAGEWILLHGQSEEAGT
ARQKLFSMIRKYRRYPGVDGIVLCLDVSVLLNSSVTERKSLADTLRLRILEVASTFQADI
AVYLFLNNIDKLPGGETFLSLMNDELLAGGLGISMTHNEKGQNNFVADEERYRELLTRVS
RYVLEILHDSPNMEMRHQLLLFTESLGALQKPLFGLFEQIFPATPIGYTGCLRQFWFGST
QNLTSWEALYYPSSTSTFESRPAGQMYFPALSQAITERGVLHATGPMPLRNRLLNIGKYV
FVVLVLCILLLMLSARYFWEYDYIGYATARFEETRRIVRDIPITNQVNDNLVAAYEQLGY
INTHYLESSPPLLTPYFEHRLLNQAMLQTYHRHLNKVFWPAVQNYVTNELKKDTQSPDGD
NYDTLKVYLMLGQPDHRSQEALVQWFMSRWESFAPQGYGQNDRKLFSYHLSELFSDTASA
APKVKLNDELIRESRIKAMKTPIHIRVINRIHDAPLPARIEDLSLADAAGPSVTLMLRRK
SPSTVTDLAIPAFYTRASYHDVVNPQLQEASEAMINEEAWVLSDGKASVSQVSLLAAAQK
LSDEARKYYLMEYANQWDAFFNDIRVRPINGLDDAALLARQLSDPSSPLANLVRFSTREI
TLTTDNNGKGAMSSGWFNIQRNKLTTARRNIIDEMSGERSRFRLTPEKAVEDRFELLRRL
GYALQSASTSNSDPLGRTFEQIYNQLITLSTSLRAGQILPQNNDFSRLQIDMARQPEPVR
SIMMDLLAVGQTQSLQQSKANLSKGVSSIASDLCSNAVSGRYPFNWLASEEIGIGDFNRM
FGRSGAMQSFFDQNLAPYVDTNGNRWKVKPDSNGVVTPKTLRSFENSAQIRDTFFDASGK
MAMSMIIRPISLTPSILEAVLDVDGQIINYSHGSNQPVKVDWPGPKGGVYIRLTFKTQDG
NVETVSFNGPWAIFRMYDVSNPRPLGVNSRELMMVMDNVSGVFKIELSSTMKDYPLWSKA
LAQFSCPKNL
NT seq 3453 nt   +upstreamnt  +downstreamnt
ttgttatattgtgtggtggatagggccgctgatcgccattggcccctatttccctctggg
ggggtatgggttcgtaagatcattattgctctgattttattttgggcactgtggccattt
gttgcaattttcttcagttggatttttcgttatgcccgtgcgccacttcccaagcgcaag
aaaaaaacggttcagcttgatcgcgtttctgcacgttttcatgatgcgatgctcaccctg
caacatgcggatctttcaagccagaaaacacgctggcagcgctggcgtcaacggcgtaag
cgccagtatatcgatgctaaaccgtggtttctggtcatggggccacccggatgcggtaaa
acgtcgatagtttatgagagtagcgagaagttcctactctcagaacagtatggtttagcg
cagaccacggatattggaccgacgcaggactgtaattggtggctgacggatcgtgctgtt
tacatcgatacggcaggggaatggatcctgctgcatggtcagagcgaagaagcgggcacg
gctcggcaaaaattgttctctatgatccgcaaatatcgccgttatccgggggttgatggg
attgttctttgccttgacgtcagcgtgcttttgaactcttcggtgacggaacgtaagtca
ctggctgatacgttgcgcctgcggatcctggaagttgcctcgacatttcaggccgatatt
gcggtgtacttgttcctcaacaatatcgataagttacctggcggcgaaaccttcctctcg
ttaatgaacgacgaacttctggccggagggcttgggattagcatgacccataatgaaaag
gggcagaacaatttcgttgccgatgaagaacgttaccgtgaactcctgacacgtgttagc
cgttatgtgttggaaatactgcacgattcgcccaacatggagatgcgccaccaattgctg
ctgtttacagaaagcctgggagcgctacaaaaacccctgtttggcttattcgaacaaata
tttccggcgacaccgattggctataccggttgtttgcggcagttctggtttggcagtacc
caaaatctgacctcatgggaggcgctgtattatccgtcatcgaccagcacctttgaaagc
cggcctgctgggcagatgtatttccctgcactgagtcaagcgatcaccgaaaggggggta
ttacacgccactggccccatgcctttgcgaaatcgcctgttaaacatcggtaaatatgtg
ttcgtggtccttgtgctctgcatcttattgttgatgctgagcgcccgctatttttgggaa
tatgactatattggctatgcgacagctcggtttgaggaaacccgtcggattgtgcgtgac
atcccaatcacgaatcaggtcaacgataatctggtcgcagcttacgaacagttggggtat
atcaacacccattatctggaaagttcaccgccactgctgacaccgtacttcgagcaccgt
ttactgaatcaggcgatgttgcaaacctaccatcgtcacctgaataaagtgttctggcct
gcggtacaaaactacgtcaccaacgagctgaaaaaggacactcaatctcctgacggtgac
aactatgacacgctgaaagtttacctgatgctcggacaacctgatcaccgctctcaggag
gcattggtgcaatggtttatgtcgcgctgggaaagttttgcgcctcagggatatgggcaa
aacgaccgcaaactcttcagttatcatttgagtgaactgttttctgacaccgcctcagct
gccccgaaagttaagctgaatgatgagctgatccgtgaatcacgcattaaagcgatgaaa
acaccgatacacatccgggtgattaatcgtattcatgacgccccactgcccgcgaggatt
gaggatcttagtctggcggatgccgccggtcctagcgtaacactgatgctgagacgtaaa
agccccagtacagtaacggatttggcgatcccggctttctacactcgggccagctaccac
gatgtggttaacccacaacttcaggaagcatcggaagcgatgattaacgaggaagcgtgg
gtgttgagtgacggtaaagcttcggttagtcaggttagtttactggctgcggcgcaaaaa
ctgtccgatgaagcgcgcaagtattatctgatggagtatgccaaccaatgggatgcattc
ttcaatgatatcagggtgcgcccaatcaacggacttgatgatgcggcgctgctggcaagg
caactctcagacccgtcatccccgttggctaatctggtgcgtttctccacacgggaaata
accctgaccactgacaacaatggtaaaggggcgatgtcgtcaggctggttcaatattcaa
cgtaataagctcacgactgcccgccgtaacatcattgacgaaatgtcgggtgagcgttct
cgttttcgtctaacgccagagaaagcggtggaggatcgctttgaactattaagacgtctg
ggatatgccctgcaaagtgcgtctaccagcaattctgatccgttgggccgaaccttcgag
cagatttataaccagttgataacactctcgacttcccttcgggctgggcagattttgccg
caaaataacgatttcagtcgcttgcaaatcgatatggcccgtcagccagagccggtgcgc
agcattatgatggatctgctggccgtcggacaaacgcaaagtctgcaacaaagtaaggcc
aacctcagcaagggcgtctcttcaattgcttctgatttatgtagcaacgccgtcagtggc
cgttatccctttaattggttggctagcgaagagataggtattggcgatttcaaccgtatg
tttggtcgttctggggcgatgcaaagcttctttgatcagaatctcgcaccgtatgtcgat
accaacggcaaccgctggaaggtaaaacctgacagtaacggtgtggtgacccctaaaact
ctgcgttcgtttgaaaactcagcacaaatccgcgacaccttctttgatgcctccggcaag
atggcgatgtcgatgatcattcgccctatctcactgactccatcaattttggaagcggtt
cttgatgtcgatggccagattattaactacagccatggttctaaccaaccggtaaaagtt
gattggccaggaccgaaaggtggggtgtatatccgcctgacgttcaaaactcaggatgga
aatgtggaaaccgttagcttcaatggtccgtgggctattttccgcatgtatgacgttagt
aaccctaggccactcggggtcaatagccgtgaactcatgatggtgatggataacgtgagt
ggcgtcttcaaaattgagttgagttccaccatgaaagattatccgctgtggtcaaaagca
ttggcacagttctcatgtcctaagaatctctaa

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