Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_3313
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Entry
YpsIP31758_3313 CDS
T00570
Name
(GenBank) radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi00790
Folate biosynthesis
ypi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
YpsIP31758_3313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypi03016
]
YpsIP31758_3313
Enzymes [BR:
ypi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
YpsIP31758_3313
Transfer RNA biogenesis [BR:
ypi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
YpsIP31758_3313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ABS48530
UniProt:
A0A0U1R0A4
LinkDB
All DBs
Position
complement(3723116..3723787)
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AA seq
223 aa
AA seq
DB search
MLYPINEMFQTLQGEGYFTGVPAIFVRLQGCPVGCSWCDTKHTWEKEADREVDMQRIMVK
TAESDAWGSASEQQLLDLFAQQGYTARHVVITGGEPSIYDLQPLTSLLEQAGFSCQIETS
GTHEVRCSAQTWVTVSPKVNMRGGLKILSQALQRADEIKHPVGRLRDIEALEALLATLDD
DKKRIIALQPISQKEDATKLCIETCIAKNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacccgattaatgaaatgttccagacgttgcagggcgagggttatttcactggc
gttccagcgatttttgttcgcttgcaaggttgcccggtaggttgtagctggtgtgacacc
aaacatacctgggaaaaagaagcggatcgggaagtcgatatgcagcgcattatggtgaaa
accgcagaaagtgatgcctggggttcagccagtgaacagcaactgttagatcttttcgct
cagcaagggtataccgcccgccatgtggttatcacgggtggtgagccatccatttacgat
ctccagcccttaacgtcactgttggagcaagctggcttcagttgccagattgaaaccagt
ggtactcatgaagtgcggtgttctgcccagacttgggtgaccgtttcaccaaaagtgaat
atgcgcggtggcctaaaaatattgtcacaggcactccagcgtgcggatgaaattaagcat
ccggttggccggttacgagatatcgaagcattagaagcgttactggcgacgttggatgat
gataaaaaacggattattgcactgcagccgataagccagaaagaggatgcgaccaagttg
tgtattgagacctgcatcgctaagaactggcggttgtcgatgcagacacataaatatctc
aatatcgcttga
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