Yersinia pestis Harbin35: CH55_570
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Entry
CH55_570 CDS
T03717
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH55_570 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypj03400
]
CH55_570 (xth)
Enzymes [BR:
ypj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CH55_570 (xth)
DNA repair and recombination proteins [BR:
ypj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CH55_570 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AJK08714
UniProt:
A0A2U2H0A3
LinkDB
All DBs
Position
642107..642913
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AA seq
268 aa
AA seq
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MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYHGQK
GHYGVALLTKEQPLAVRRGFPSDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPI
KFPAKARFYADLQRYLEEQLSPEAQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKCSFL
PEEREWLERLQNWGLVDTFRAANPDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAAR
CIATGIDYAIRGMEKPSDHAPVWSEFSL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgtttcttttaatatcaatggcctacgtgctcgtcctcatcaattagccgca
ataattgagcagcatcaaccggatgtgatcggcctacaagaaactaaggtacatgatgat
atgtttcctcttgaagacgtcagccagcatggttaccacgttttttaccatgggcaaaaa
ggtcattacggtgttgcactattgacgaaagaacagccactggctgtgcgccgaggtttc
ccaagcgatgaagaagatgcacagcgccgtattatcatggccgacttagccaccccgcaa
ggcaccttaacggtaatcaatggttattttcctcagggagaaagtcgtgaccatccaata
aagttccccgctaaagcgcgcttttatgctgacctgcaacgctatcttgaggagcaactc
tcccctgaggcccaggtacttatcatgggggacttgaatatcagtccaaccgatttagat
atcggtattggtgaagataaccgtaaacgctggctgcgcacaggcaaatgctcgttctta
ccagaagaacgagagtggctggaacgtctgcaaaactgggggttggttgatactttccgc
gcggctaatcctgattgtaatgaccatttttcatggtttgattaccgttcccgtggtttt
gatgaaaacagaggccttcgcatcgatttattgctggccagtcaaccactggcggctcgt
tgtattgctacaggtattgattatgcaatccgtgggatggaaaaaccatcagaccacgcg
ccggtttggtccgaattctcactttaa
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