Yersinia pestis Z176003: YPZ3_3518
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Entry
YPZ3_3518 CDS
T01210
Symbol
thdF
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ypz
Yersinia pestis Z176003
Brite
KEGG Orthology (KO) [BR:
ypz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypz03016
]
YPZ3_3518 (thdF)
Transfer RNA biogenesis [BR:
ypz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
YPZ3_3518 (thdF)
Prokaryotic type
Methyltransferases
YPZ3_3518 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
ABC_tran
Roc
AAA_28
Arf
SRPRB
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
ADE66427
LinkDB
All DBs
Position
4522822..4524186
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AA seq
454 aa
AA seq
DB search
MSTTDTIVAQATPPGRGGVGILRVSGRAASEVAHAVLGKLPKPRYADYLPFKDVDGSTLD
QGIALYFPGPNSFTGEDVLELQGHGGPVILDLLLKRILALPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAVNSLQGAFSARIHQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEGQLNGVMADLEQVRTEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREANDEVERIGIERAWNEIEQADRVL
FMVDGTTTDATEPAAIWPEFMARLPATLPITVVRNKADITGETLGLTKVNGHSLIRLSAR
TGEGIDLLRDHLKQSMGFTSNTEGGFLARRRHLQALETAARHLIQGHEQLVSAYAGELLA
EELRLAQQSLSEITGEFSSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccactgatactatcgtggcccaagcaacgccccctggtcgtggcggtgtcggc
attctacgtgtttcaggtcgtgctgcctcagaggttgcacacgccgttctgggtaaatta
cctaagccacgttatgccgattatctgccgtttaaagacgtggatggcagcacgctggat
caaggtatcgctctctatttccccggtccaaattctttcactggcgaagatgtattagag
ctgcaaggccatggtgggccggtgatactggatttactgttaaaacgcattctggccctg
ccagggctgcgtattgcccgcccaggggagttttccgagcgtgccttcctcaacgacaag
ctggacttagcacaggctgaagccattgccgacctgatcgacgccagttcagagcaagca
gcacgttcggcagtaaactcattgcaaggcgcattttcagcgcgtatccatcaattggtg
gaagcacttactcacctgagaatctacgttgaagctgccattgactttccagatgaggaa
attgacttcctttctgatggcaaaatcgaaggccaactgaatggtgtcatggccgatctg
gaacaggtacgtactgaggctagacaaggcagcttactacgtgaagggatgaaagtggtg
attgctggccggccaaacgcagggaaatccagtttactcaatgcgttagctggccgtgaa
gcggcgattgtaacggatatcgcgggcaccacccgtgatgttttacgggaacacattcat
attgatgggatgcctttacatatcattgataccgcagggttgcgggaagccaatgacgaa
gttgagcgcattggcattgaacgcgcgtggaacgagatagaacaggctgatcgtgtattg
tttatggtggatggcaccaccaccgatgccaccgaacctgcggctatctggccagagttt
atggcacgcttaccggcaacactgcccatcactgtggtacgcaataaagcggatataaca
ggtgaaacgctggggctgaccaaagtgaatggtcactcacttattcgcctgtcggcacgc
actggagaaggtattgacctgctgcgtgaccatttaaaacaaagtatgggctttaccagc
aacactgaaggcggtttcctggctcgacgtcgccatttacaggcactggagactgccgcc
aggcatttgatacaaggccatgagcagttagtgagcgcttacgctggtgaattactggca
gaagaactgcgtttagcacaacaatcattgagtgaaattaccggtgaatttagttctgat
gacttactggggcggattttttccagtttctgtatcggaaaatga
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