KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_13175
Entry
UGYR_13175        CDS       T03887                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00470  D-Amino acid metabolism
yrb00550  Peptidoglycan biosynthesis
yrb01100  Metabolic pathways
yrb01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    UGYR_13175 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    UGYR_13175 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    UGYR_13175 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:yrb01011]
    UGYR_13175 (ddl)
Enzymes [BR:yrb01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     UGYR_13175 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:yrb01011]
 Precursor biosynthesis
  Amino acid ligase
   UGYR_13175 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp_3 ATP-grasp ATPgrasp_Ter ATPgrasp_ST RimK TTL ATPgrasp_YheCD
Other DBs
NCBI-ProteinID: AKA39249
LinkDB
Position
2927740..2928660
AA seq 306 aa
MGEKVAVLLGGTSAEREVSLLSGQAVLTGLREAGIDAYPIDTRDFPVTQLKERGFDKAFI
ALHGRGGEDGTLQGVLDFLQLPYTGSGVMASALTMDKLRSKLVWQASGLPVSPFIALSRQ
QFETLSSGDFAAGIAKLGLPLIVKPSREGSSVGMSKVNHASELNAALQEAFRHDNDILIE
KWLSGPEFTVAMLGDEVLPSIRIQPTGVFYDYEAKYLSDTTQYFCPSGLGEQQEQQLAEL
ARQAYQALGCSGWGRVDVMQDGDGGFYLLEVNTSPGMTSHSLVPMAAKQAGMSFSQLVTR
ILALAN
NT seq 921 nt   +upstreamnt  +downstreamnt
atgggtgagaaagttgccgtattgctaggtggtacctccgctgaacgtgaagtgtcgttg
ctgtcgggtcaggcggttttaaccgggctacgggaagccggtattgatgcgtatcctatt
gatactcgtgactttcctgtcactcagttaaaagaacgaggtttcgataaagcctttatt
gcattgcacggccgtgggggtgaagacggtactctgcaaggcgtattggacttcctgcaa
ttgccttataccggcagtggcgtgatggcatcagcgctgacgatggacaagttacgtagc
aaattggtgtggcaggcttccggtttgcctgtttctccctttattgccctgtctcgtcaa
caatttgaaacactttcttcaggtgacttcgctgccggtatcgctaagcttggcctgccg
ctcattgtcaagccaagccgtgaaggctctagtgtggggatgagcaaggtcaatcatgcc
agcgaattgaatgcggcattgcaagaagcgtttcgtcacgataatgacatattgatcgaa
aaatggctcagtggcccggaatttacggtggcaatgctgggtgacgaggttttaccttca
attcgtattcagccaaccggtgttttttacgattatgaagcgaagtatctatctgatact
acacagtatttttgtccgagtggtttaggtgagcaacaagagcagcaattggctgaactg
gctcgtcaggcataccaggcgctaggttgcagcggctggggacgggttgatgtcatgcag
gacggtgacggtggtttctatctgctggaggttaatacctcgccgggtatgaccagccac
agtctagtgccgatggcagccaaacaggctgggatgagcttctcccagctagtcacgcgt
attctggcgttggctaactga

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