Yersinia rohdei: CH64_1770
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Entry
CH64_1770 CDS
T03610
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
yro
Yersinia rohdei
Pathway
yro03410
Base excision repair
yro03430
Mismatch repair
yro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH64_1770 (recJ)
03430 Mismatch repair
CH64_1770 (recJ)
03440 Homologous recombination
CH64_1770 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_1770 (recJ)
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CH64_1770 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CH64_1770 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CH64_1770 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AJJ12042
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Position
complement(1958643..1960376)
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AA seq
577 aa
AA seq
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MTLKTQLRRREVADDSHLPAQLHPLLRRLYASRGVKSAEELERGVKGLLAWQQLDGIEAG
VTLLQQALADRRRIVIVGDFDADGATSTALAVLALRSMGGSNIDYLVPNRFDDGYGLSPE
VVEQVAARGAELIVTVDNGISSHAGVDLAHAKGIQVLVTDHHLPGDILPAAEAIINPNLV
GCDFLSKSLAGVGVTFYLMLALRARLRESGWFEQRALAVPNLAELLDLVALGTVADVVPL
DANNRILVHQGLSRIRAGKCRPGIRALLEVANRDARQLAANDLGFSLGPRLNAAGRLDDM
SIGVALLLSDDIAQARALAIDLDSLNQARREIEQGMQVEALQLCDQLERTSTELPYGIAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGLLKGSGRSVAGLHMRDALERLDTLNP
GLMLKFGGHAMAAGLSLEQEKFDEFRQRFADLVGEWMDASQLEGVIWSDGELKGNELSLE
TAELLRDGGPWGQSFPEPTFDGKFRILQQRLVGERHLKLMLEPMNGGPLLDGIAFNIDTT
LWPDSSVREVKLAYKLDINEYRGNRSVQLLVQHLWPY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgacattgaaaactcaactccgtcgtcgtgaggtggcggatgatagtcatttgcccgcg
caattacacccgttgttgcgccgtctttatgccagccgtggtgtgaaaagtgccgaagag
ctggaacgtggtgtaaaaggcttgttggcctggcagcaacttgatggcattgaggccgga
gtcactctgctgcaacaagccttagctgaccgccgtcgtatcgtgattgtcggcgatttt
gatgctgatggcgcaaccagtaccgcgctggcggtgctcgcgctgcgtagcatgggcggc
agcaatattgattacctggtgccaaatcgttttgacgatggttatgggcttagccctgaa
gttgtcgagcaagttgccgcacgtggcgcagagctgattgttaccgtcgataacggaatt
tcctcccatgcaggtgtggatttggctcatgccaaaggtatccaagtattggttactgac
caccatctgccgggcgacattttgccagccgcagaagccattattaatccgaatttagtc
ggctgtgattttctttccaaatcacttgcaggagtgggcgtcactttttatctgatgttg
gcgctgcgtgctcgcctcagagagagcggttggtttgaacaacgtgcattagccgtgcct
aatttggctgaattattagatttagtcgcactgggcaccgtggccgatgtagtgccactg
gatgctaataaccggattttggtgcatcagggcctgagtcgtattcgggctgggaaatgc
cggccagggattcgagcattgctggaagtggctaaccgcgatgctcgccaattggccgcg
aacgatcttggtttctctctcggcccacgacttaatgcagccgggcgtctggatgatatg
tccattggggtggcactgctgctcagtgacgatatcgctcaggccagagcattggccatt
gatcttgattcactcaatcaggcacgccgtgagatagagcaggggatgcaagtcgaagcc
ttgcaactgtgtgaccaactcgagcgtaccagtactgaattaccttacggcatcgcgatg
taccacccagagtggcatcagggcgtggtagggattttagcttcccggattaaagagcgt
tttcaccggcccgtgattgcttttgcaccagcgggcgagggcttactgaaaggctcgggg
cgcagtgttgccggtttacatatgcgagatgcccttgagcggctggatacgttaaaccca
gggttgatgctgaaatttggcggtcacgccatggcggcagggttatcgctggagcaggaa
aaatttgatgagttccgccagcgctttgctgatttggtcggtgaatggatggatgcctca
cagctagaaggcgtaatctggtcagatggcgaactgaaaggcaacgaattatcgctggaa
acggcagagttactgcgcgatggtggcccgtgggggcaatccttcccagaacctacattt
gatgggaaattccgcattttgcaacagcgactggtgggcgaacgccatctgaaactgatg
cttgaacccatgaatggcgggcctttactggatggtattgcttttaatatcgataccact
ttgtggccggacagtagcgtgcgtgaggttaaactggcttataaacttgatattaatgag
tatcgcggtaatcgcagtgttcagctattagttcagcacttgtggccgtattag
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