KEGG   Ziziphus jujuba (Chinese jujube): 107419652Help
Entry
107419652         CDS       T04794                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:zju00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    107419652
Enzymes [BR:zju01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107419652
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     107419652
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
1
AA seq 1059 aa AA seqDB search
MSRDSDDALRLINWRKGGAKTGAYAGNFALVAAEVLQRRQGMTSGGLTIKELNELLDRLA
SSENRAEKITVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC
DLKLVCEKLRNRSQRHKRQDIEVGKAVRPQLAMRVGDATVAWKKLHGKEVVIECKFDGDR
IQIHKNGNEICYFSRNFLEHSEYGHAMPDIIIQNVMADRCILDGEMLVWDTSLNRFAEFG
SNQEIAKAARDGFNSDRQLCYVAFDILYVGDTSVIHQSLKERHELLQRTVKPLKGRLEIL
VPNGGINNHRNSGEPCWSLIANNVDDVERFFKETIENRDEGIVLKDLGSKWEPSDRSGKW
LKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAERPAPNTYPRRFISFCRVGT
GLSDEELDAVVTKLKPYFRKYDYPKRAPPSFYHVTNNSKERPDVWIDNPEKSIILSITSD
IRTIRSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFIELVHSSNGTTQRGTDYGGLQD
NKLKRRKSSTKDEKRNLLAVPSHFVHTDISGIKEDTLIFSNMMFYFINVPSTHSLDTLHK
MVAENGGSFSMNLNNSVTHCIAAESKGIKYQAAKLRGDVIHYSWVLDCCSKRSLLPLQPK
YFLFLSDSSKKKLQEEIDEYSDSYYQDLDLADIKQLLSNVETSEDTKAVDCYKLKYCPME
KWSRFHGKPDWEVVLGLALRRLKIEVCMGGGKVSDSLSHATHLVILSVPGFNLDVENELR
SLTTMEKHLLQKKRLHMVESQWLEDCLEREERLPEETYSLKPAVEELDIGECDHNVAFPN
KEEQEIRGKNALKTHRILASAEPVSKRKRGRPAGTSTKKGKLGVNQAQRRRIHIQKRPAK
ISGNASDECGSDDDHTFKEESKAREQNYGLIGKENLEIQEAKTVEDSESSQRGKATEQED
VRHEEWFNRVPEIDMSEKCDNEDNKKPEKLEMMTDPVEAMLLDMIPSLGTKKIETANKSF
EDGKPSADMNAPSADLNVEPTKKKKVSYKDVAGELLKDW
NT seq 3180 nt NT seq  +upstreamnt  +downstreamnt
atgtctagggattccgacgatgctctccgcctcatcaattggcgcaaaggcggtgccaaa
accggtgcttacgccggcaatttcgctcttgttgccgccgaggtgcttcagcgtagacaa
ggaatgacttctggtggactaacaattaaggagcttaatgagttgcttgatcgtttggct
tctagtgaaaatagggcagaaaagataacagttctttctactctaattaaaaagacaaat
gctcaggaaatgaagtggatcattatgatcattcttaaagatttgaagttggggattagt
gaaaagagcatttttcatgaatttcatccagatgctgaagacttgtttaatgtcacctgt
gacttaaaattagtctgtgaaaaattgaggaaccgcagtcagcggcacaaacgtcaggat
attgaagttggaaaggctgtgcgccctcaactagctatgagagttggtgatgcaactgtt
gcatggaaaaagcttcatgggaaggaagtggttattgaatgcaaatttgatggggatcgc
attcaaattcataagaatggaaatgagatatgttacttttcaaggaattttcttgagcac
tctgaatatggacatgcaatgccagacattattatacaaaatgttatggctgataggtgt
atacttgatggtgaaatgttggtttgggacacatctttgaatcgttttgctgagtttggt
tcaaatcaggaaatagccaaggcagcaagagatggattcaatagtgatcgacagttgtgc
tatgttgcatttgatattctttatgttggagatactagtgttattcaccaaagcttgaag
gaaagacatgaacttctccaaagaactgtgaagcctttgaaggggcgtctggagatctta
gtacccaatggcggtattaataatcatcgtaattctggggaaccttgttggtcacttatt
gctaataatgtggacgatgttgaaaggttttttaaagaaaccattgaaaacagagatgaa
ggaattgttttaaaggatcttggctccaaatgggaacccagtgaccggagtggaaagtgg
ttgaaattgaagcctgaatacatacgtgctggttccgatctggatgttcttataatagga
ggatattatggatctggacgacgtgggggggaggtagctcaatttttggtgggacttgct
gagcgtcctgccccaaatacatatccaagacgttttatatctttttgcagagttggaact
ggactttctgatgaggaactagatgctgtcgtaacaaagttaaagccttactttagaaaa
tatgactatccaaaaagggccccaccaagtttttatcatgtgacaaataattccaaggag
aggccagatgtttggattgacaaccctgagaaatcaataatactttccattactagtgac
atccgaactataaggtctgaggtttttgctgcaccatacagccttagatttccacgtatt
gaccgagtcagatatgacaaaccttggcatgaatgtcttgatgtgcaatcatttattgag
cttgtacattcaagcaatggtaccacacagagagggacagattatggtggactgcaagat
aataaactaaaacgcaggaaatcctctacaaaggatgaaaaaaggaatctattggctgtt
ccttctcattttgttcatacagatatttctggcattaaggaggacaccttgattttttca
aatatgatgttctacttcattaatgttccttcgactcattcacttgataccttgcataaa
atggttgctgagaatgggggctctttctccatgaatttgaataactctgtcactcactgt
attgcagctgaaagcaaggggatcaagtatcaggcagcaaaactccgtggagatgttatt
cattactcttgggttttggattgctgttctaaaagaagtctactgcctttgcagccaaag
tatttcctcttcttatccgactcttctaagaaaaagttacaagaagaaattgacgaatat
tctgactcatactaccaggatcttgaccttgcagacatcaaacagctgttaagcaatgtg
gagacatcagaagataccaaggctgtggactgttacaagttaaaatactgtccgatggaa
aagtggtctcgcttccatgggaaaccagattgggaagttgtgttaggacttgcactgagg
agattaaagattgaagtttgcatgggtggtggcaaagtcagtgacagtctttctcatgca
acccatttggtaatcttgtcagttccaggatttaatttggatgttgaaaatgaactaaga
agtttgaccacaatggagaaacatcttcttcagaagaagcgattgcatatggttgaatct
cagtggttggaagactgcttggaaagggaagaaaggttgccagaagaaacatatagcttg
aagcctgcagtggaagagctggacattggggagtgtgaccacaacgttgctttccctaat
aaagaagaacaagagataagaggcaaaaatgctctaaaaacccatagaatcttggcctca
gctgagcctgtttcaaagaggaaacgaggaagacctgctggcacaagcacaaagaaagga
aaacttggggtcaaccaagctcaaagaagacgaatacatattcaaaagaggcctgctaaa
atatctggcaatgcatcggatgaatgtggttctgatgatgatcatacatttaaagaagag
agcaaagcaagggagcaaaattatggattgataggtaaagaaaatttggaaatccaagaa
gccaaaacggtagaagattctgagtcatcacagagaggcaaggcaactgaacaagaagat
gttagacatgaagagtggtttaatagagttcctgaaattgacatgtctgaaaagtgcgat
aatgaggacaataagaagcctgagaagctggaaatgatgacagatccagttgaagccatg
ttgttggatatgattccaagcctaggaacgaagaagatcgaaactgcaaataaatccttt
gaagatgggaagccatcagcggatatgaatgctccatcagcggatttgaatgtggagcct
acaaagaaaaagaaagttagctacaaggatgttgctggtgaactgctcaaagattggtaa

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