KEGG   Zea mays (maize): 103645969Help
Entry
103645969         CDS       T01088                                 

Definition
(RefSeq) putative DNA ligase 4 isoform X1
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
zma  Zea mays (maize)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:zma00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    103645969
Enzymes [BR:zma01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103645969
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     103645969
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
2
AA seq 1208 aa AA seqDB search
MAAKVRFGLLVAMFQAMSGDKSSAKKRGRLRAFLDRAYVPCGGRDDYFSALRLVLPGLDR
ERGSYGLKEAALAAVLVDALGIAKDSTDAVRLTNWRRGGGGRNAGNFSLVAAEILQRRQG
ITSGGLTIKEVNDALDRLATTENRSEKALILSNLIKKTNALEMKWLLMIILKDLKLGISE
KSIFEEFHPDAQDLFNVTCDLKFVCEKLNDRSQRHKRQDIEIGKAVRPQLALRVRDSSVA
WKKLHGKQVVAECKFDGDRIQIHKNGEEIHFFSRSFLDHTEYAPGMSKIIKENILVDRCI
LDGEMLVWDTVLNRFAEFGSNQEIAKAAREGLETDRQLCYVVFDILYAGDTSVIHQSLTE
RHQILQKVVKQLKGHLEILIPRRGLNVPRPSDEPCWSIIAHNAEDVDKFFKETIENRDEG
IVLKDLDSKWEPGDRNGKWLKLKPDYIHAGADLDVIIIGGYYGSGRQGGEVAQFLVGLAV
PSDDNSYPKRFLSFCRVGTGLSDEERDALVTKLNPYFRKNEYPKKPPKFYEVTNNSKERP
DVWIESPDKSVIISVTSDIRTIKSEVFAAPYCLRFPRIQRVRYDKPWHECLDVQAFVDIV
HSNNGTIQRVADDNSLKNDDTKHSRTNKKVEKCVSIIPSHFMKTDVSGLKGETLIFANLI
FYFVNIPSSYNLEYFHKLVVENGGSFSMNLNDSVTHCIAAEKKGIKYQAALRQGRIIHYE
WILDCCKEKHLLHLHPRYILFIADFARHKFPEEIDSYADYYYWDIEIADLKQIFCNIDKV
SGDSNMVIQYKKKHCIDERFCFFQGCCVYLHNAPLVNADYNVISDLALKRVKQDLTMHGG
QVCSSIAPATHLVVVSVLQVYNFDNLYKSFPPAERRYLHDKRLHVVSNKWLEDSVEKQMK
LSETAYSLKPDTLEELEIKRSEENVQPPEHKFEEHKEVERSHAENMPRKRSRPTSSRTAR
AAPRAVRRIRPRRGNQKAKIGDVESEESGPSECQDDENLDTDDTSKIEEGITNKNKGLPA
PASKPAWRTGATKGNQHTKIDDSGSEESGPCETAQDDYISKMEVDNIDNDRGPPPGAQLF
TLGEQEVKGVKLNTVEEKQDSPFQRTTAAEAMSSTPGEKIEQMADPLHAMLLDMLPLLGQ
KRTEDTSKAPLAKAEKDPPAIGSSTSNSEILLPDAGTSGVPAPEPSAAPPKKKKVSYRDV
VSELLKDW
NT seq 3627 nt NT seq  +upstreamnt  +downstreamnt
atggcggcgaaggtgcggttcggcctactggtggcgatgttccaggccatgtcgggcgac
aagagttcggcgaagaagcgcggccgcctgcgcgcgttcctcgaccgcgcctacgtgccc
tgtggcggtagggatgactacttcagcgcgctccgcctcgtgctgccggggctcgaccgt
gagcgcggctcctacggtctcaaggaggcggccctcgccgccgtgcttgtggacgccctt
ggcatcgccaaggactctaccgacgccgtccggctcaccaactggcgccgcggtgggggt
ggccgcaacgccggcaacttttcgcttgtggccgctgagatcttgcaacggaggcaaggt
ataacttctggcggattgacgataaaggaggtcaatgatgcacttgatcgtctagctaca
actgagaacaggtctgagaaggctttaatactttccaatctgatcaagaaaaccaatgcc
cttgaaatgaagtggcttctgatgataattcttaaagatttgaaattagggataagcgag
aagagcatattcgaagaatttcatcctgatgcgcaagacttgttcaatgtcacttgtgac
ttgaaatttgtctgtgagaagctcaatgatcgaagccaaaggcataaacgccaggatata
gaaattgggaaggctgtcaggcctcagctagctttgagagttcgtgattcttcagttgct
tggaagaagcttcatggaaaacaagtagttgctgagtgcaaatttgatggtgaccgtatt
caaatccacaaaaatggggaagagattcatttcttctctaggagctttcttgatcacact
gaatacgcacctgggatgtcaaagattattaaagaaaatatcttggttgacagatgtata
ttggacggagaaatgcttgtctgggacactgtacttaaccgttttgctgaatttggctca
aaccaggaaatagctaaggctgcaagagagggattggagactgatcgacagttgtgttat
gttgtttttgacatcctttatgctggagacaccagtgttatccaccaaagtttgacggag
cggcatcaaattctgcagaaggttgtgaaacagttaaagggtcatcttgagattttgatc
ccaagacgtggtttaaatgtccctcgcccttcagatgaaccatgctggtcgattattgca
cataatgctgaagacgttgataaattcttcaaagagactatcgagaacagagatgagggc
attgtactgaaggaccttgattccaaatgggaacctggtgatcgaaatggaaagtggctt
aaactaaagcctgattatatacacgcgggtgccgatctggatgttattattataggggga
tactatggatcaggacgtcaaggtggagaggtcgcacagtttttagttggccttgcagtc
ccttcagatgataatagttatcccaaaaggttcctttcgttttgccgagttggtactggc
ctctctgatgaagagcgtgatgctcttgtcaccaaactgaacccttatttcaggaaaaat
gagtaccccaaaaaaccaccaaaattctatgaagttacaaataactcaaaggagagacca
gatgtttggattgaaagtcctgataagtcagtcataatatctgtaacaagtgacattcgt
acaatcaagtctgaggtatttgctgctccatactgtttgaggttcccccgtattcagcga
gtgagatatgacaagccatggcatgagtgccttgatgtgcaggcatttgtggacattgtg
cattcaaataatggtacaatacaaagggtggcagatgataatagcctgaagaatgatgac
acaaaacattcaagaacaaacaaaaaagtagagaagtgtgtctcaatcatcccttcacat
ttcatgaaaactgatgtatcaggtctcaagggagaaaccttgatatttgccaacctgatt
ttctattttgtcaacattccatcatcatataatctcgaatattttcataaactggttgtg
gaaaatgggggatctttctccatgaatctcaatgactctgttacacactgcatagctgcg
gagaagaaaggtatcaaatatcaggcagctttacgacagggaagaatcattcactatgag
tggatattagactgttgcaaggaaaaacatcttcttcatttgcatcctaggtatatacta
tttattgctgatttcgctaggcacaaatttcctgaagagatcgattcatacgctgactat
tactactgggacattgaaattgctgacctcaagcagattttctgtaacattgacaaagtt
tctggtgattcaaacatggttattcagtacaaaaagaagcattgcatagatgaaagattc
tgtttcttccagggttgctgtgtctacttgcataatgcgcccttagtgaatgcggactac
aatgtaatatctgatcttgcactgaagagggtgaagcaggatctaacaatgcatggtggt
caagtctgcagcagtattgctccagctactcatttggtagtagtttcggttttacaggtc
tataactttgataacctgtacaagagcttccctcccgctgaaagacgttatctacatgac
aaaagattacatgttgtcagtaacaagtggttggaagattcagtggagaaacaaatgaag
ctctctgaaactgcttacagccttaaaccagatacactagaagaactagaaattaaaagg
agtgaggaaaatgttcagcctccggagcataagtttgaggaacacaaggaggttgaaaga
tctcatgcggaaaatatgccaaggaaaaggagtaggccaaccagttcaagaactgcaagg
gctgctcctagagcagtccgccgaataaggcctagaagaggaaaccagaaagcaaaaata
ggtgatgttgaatctgaagaaagtggccccagcgaatgccaagatgatgaaaatttggac
acagatgatacctctaagattgaagaaggtattaccaacaaaaacaaaggactccctgca
cctgcttcaaaaccagcctggagaacaggggctacaaaaggaaatcagcatacaaaaata
gatgacagcggatctgaagaaagtgggccttgtgaaacagcgcaagatgattacatctct
aagatggaagtagataacattgataatgaccgtggaccaccgccaggtgctcagcttttc
acgttgggggagcaagaggtcaaaggtgtcaaattgaacaccgtggaggagaaacaagac
agccctttccagagaacaaccgctgctgaagcgatgagtagcacgcctggtgagaagata
gaacaaatggctgatccgttgcacgccatgcttctggatatgttgccactcctgggccag
aaaaggacagaagatacaagcaaggcgcccttggcgaaagctgagaaggatccacctgcg
ataggaagctccacatccaattctgagattctgttgccagatgctggaacatccggggtt
ccagccccagagccaagtgcagctccaccaaagaagaaaaaagtgagttacagagatgtc
gttagtgaacttctgaaagattggtga

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