Zootermopsis nevadensis (dampwood termite): 110827083
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Entry
110827083 CDS
T05136
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zne03041
]
110827083
Enzymes [BR:
zne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110827083
Spliceosome [BR:
zne03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110827083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
KH_2
CMS1
HEM4
KH_5
DFRP_C
P-loop_SecA
KhpA-B_KH
Motif
Other DBs
NCBI-GeneID:
110827083
NCBI-ProteinID:
XP_021914077
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MFWNTTKGVMNDGWESDGESHIQHTPVYSQTFSRGGSRRGGGTGCDYGNWQGGGRNNYRS
NNPAEEKENEQGSGRFDHNRGRHRGGGSWRENSSGGPSGYGGGSGDGTKVMIKSSDVGKV
IGKGGSKIRELQGESGAHIQIGKPSDEDFGQTTSVIVSGSGESVAKAKQLIEDFLNNFNS
RSNGSSGNISGSGNGVYGTAVSESEPKKPPVINWAEVNRIYDEAQKERWNKCPPLLKDFY
IEDPHVASMLPEEVQKLRKEKNNIVVTYVFEEGENAIPNPVRTFEQCFAHYPDILEEIYK
QNFEVPSPIQCQAWPILLKGHDLIGIAQTGTGKTLAFLLPALIHIDKQPVPRSQRGGANV
LVMAPTRELALQIEKEVKKYSYRNIKCVCVYGGGNRREQVNLVAEGIEIIIATPGRLNDL
VMAGIIDVKSVTYLVLDEADRMLDMGFEPQIRKILLDIRPDRQTVMTSATWPEGVRRLAQ
SYMKNPIQVFIGTLDLAAVHSVTQRIELIKEEDKSALLREFIDNMEPDDKVIVFVGKKTR
ADDISSELSLEGIKCQSIHGNREQYDREQALEDLKTGEVRILIATDVASRGIDIEDVTHI
FNYDFPRNIEEYVHRVGRTGRAGKTGESISLITREDWAQAKELIAILEEANQEVPEELTK
MAERFNVWKEKKAAEKERERMDLRGCRGEGRSSRSSFGGGGGGRRDRGKW
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttctggaacacaacaaaaggcgtcatgaatgatggttgggagtctgatggtgaaagc
cacatacaacacactccagtatattcccaaacctttagccgtggaggtagccggagaggt
ggtggcacaggatgtgattatggaaactggcaaggtggtgggaggaataattacagaagt
aataatccagctgaagaaaaagagaatgaacaaggaagtggaaggtttgatcacaataga
ggaagacatcgaggtggtgggagttggcgagaaaattcttctggtggtcctagtggctat
gggggaggatcaggtgatggaaccaaagttatgataaagtcaagtgatgttgggaaggtc
ataggaaaaggtggatcaaaaatacgagagctgcagggtgaaagtggtgcacatattcag
attggaaagccaagcgacgaagattttggccaaacaacatcagtgattgtatctggatct
ggtgaatcagttgctaaggcaaagcagctgattgaagattttttgaataacttcaattca
aggagtaatggaagctctggcaatattagtggatctggaaatggtgtctatgggacagct
gtttccgagtctgaaccaaagaagccaccagttataaattgggctgaggttaacagaatc
tatgatgaagcccagaaagaacgatggaataaatgtcctccattacttaaggatttttat
attgaagatccacatgttgccagtatgttgccagaggaggtccagaaactccggaaggaa
aagaataacattgttgtgacttatgtgtttgaagaaggtgaaaatgcaatacctaatcct
gttcggacatttgagcagtgctttgcacattatccagacattttagaagaaatttataag
cagaactttgaagttccttcacctatacagtgtcaagcttggccaattttattaaaaggt
catgaccttattgggattgcacaaactggcacagggaaaacccttgctttcctgttacca
gctcttatccacatagataaacaaccagttcctaggtcgcagcgtggtggagcaaatgtt
ctggtgatggctcctacaagagaattggctttgcaaattgaaaaggaggtgaaaaaatat
agttacaggaatattaagtgtgtttgtgtatatggaggaggaaacagacgggaacaagtg
aatcttgttgcagagggaattgagattatcattgctactccaggaaggttaaatgattta
gtaatggcaggtataattgatgttaaatctgttacttacttggtccttgatgaagcagat
cgtatgttggatatgggatttgagcctcaaattcggaaaatcctcttggatattcgtcca
gatagacaaactgttatgaccagtgcaacatggcctgaaggtgttcggaggttagcccaa
tcatatatgaaaaatcccatccaagtattcattggtactctagatttggcagcagttcat
agtgttacacagaggatagagctaataaaagaggaagataaaagtgcattgctgagagaa
ttcattgataatatggaacctgatgacaaagttatagtctttgttggcaagaagacgcga
gctgatgacatttcatctgagttaagtctagaaggaattaaatgccaaagtattcatggg
aatagggagcagtatgatcgggaacaagccttggaggacctcaagactggggaagtgcgc
attttgattgccactgatgttgcctcacgaggaattgacattgaagatgtcactcatata
tttaattatgactttccacgcaacattgaagagtatgtgcatcgtgtaggccgaacagga
agagctggaaaaacaggtgaatctatcagtttgataacaagagaagactgggctcaagcc
aaggagctgattgcaattctggaagaagctaatcaggaagtgcccgaggaacttacaaaa
atggctgaacggttcaatgtatggaaagaaaagaaagctgcagaaaaggaacgagaaaga
atggatcttcgaggttgcaggggtgaaggaaggagtagtagaagtagttttggaggtggt
ggtggaggaagacgtgataggggtaaatggtaa
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integrated database retrieval system
