Zootermopsis nevadensis (dampwood termite): 110837940
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Entry
110837940 CDS
T05136
Name
(RefSeq) collagen alpha-1(XI) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110837940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zne00536
]
110837940
Glycosaminoglycan binding proteins [BR:
zne00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110837940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
BSP_II
Motif
Other DBs
NCBI-GeneID:
110837940
NCBI-ProteinID:
XP_021936328
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MQQLRTYEMTAWPVLVLLLIIRTSTQDPEAADGLVDLLHATRIHNLPLGVNKTTGMCTSR
PGSEPDVAYSISERTILTVQTAQLFPLGFPWDFSLLLVVSPTKGARRAAFFTIYSDTGDE
QIAVSLGDDITLFYEDPDTKPTSKKTISFGADISDGKWHRLGFSVKGDAATLILDCKKQI
TKELVRQTSSKISTTGIILIGQQLLDDILYTGAVQLFKISPTPDAAYEICTSFAPDCDTA
IGATEAVDDNRDEEEEDEEEDEEEGEEEIEEDLFQINGTSDPLVVTHEYQQNITGEEGSG
DEYTGVHGGDSRYHYITARGPAGPRGYMGPPGAPGPPGPKGQMGRDGIGGINGIPGPPGH
VFMIPLNVQGYDKGPDQHTELFRQMLSQHMTAMRGSEGPMGLTGIPGPEGPPGPEGLKGE
PGDIGEPGPRGLRGMMGLPGREGRRGRPGRDGERGVTGPPGAKGEQGIQGLPGLPGEKGD
RGLTGSTGEQGLPGHDGMQGEEGPPGLPGLPGELGPRGFPGPRGFPGLPGPPGIPGSEGP
VGAKGNSGPPGQPGQPGQAGPVGPIGSPGPQGQLGPPGLAGPQGKPGIPGLPGADGAPGH
PGNPGMPGAKGDIGSPGPQGPVGFPGSRGVKGDEGKRGNAGDKGDKGDRGADGEKGDLGM
KGERGPNGPPGIPGLEGPEGPKGFEGPRGETGPPGQPGEKGKLGIPGFAGYPGPPGEKGD
KGSEGKNGQPGEKGDRGNPGLPGERGEAGPRGFRGSRGRRGLEGIPGPKGDTGQPGPPGP
QGETGPQGPEGPRGFSGPQGPPGTNGKDGVQGQPGERGPPGEPGPTGPAGAPGVVGPPGP
TGEPGPVGEPGIPGQPGHPGEPGHPGEAGKEGQTGPAGPQGKPGPPGGPGLPGFPGERGL
SGLPGMPGLKGDMGPIGPPGPHGDKGQQGDPGKEGPPGPEGRKGPQGPPGPAGAKGERGE
AGLPGGTGRDGLPGQRGLPGPPGPMGSPGEDGDKGDSGPPGEKGFKGSRGETGPPGPPGP
QGPRGEPGALGPPGEKGPPGEIGRQGTKGEDGPAGVAGPAGPAGPQGIPGPPGMKGEIGD
IGAKGPEGPAGAPGEPGPRGSKGGEGIPGPPGPEGLQGPKGDPGNPGPPGPTGIDGKHGE
RGPPGPKGEEGKPGVQGPPGPRGSVGPEGPKGSPGPPGFPGTAGEPGLVGPKGEPGKDGA
DGRPGDAGPPGEAGPPGKMGPVGPPGKVGSEGPAGQQGSTGTPGEKGDKGPPGPPGLQGP
LGPQGVPGSQGSPGLRGSPGPAVPGGEGLPGKVGETGPKGPKGDRGRRGPKGHRGELGTS
GHKGDMGEKGERGMKGPTGPEGPKGEPGLQGPQGQKGSDGPPGLPGLEGPPGPKGSEGVG
GTKGEQGPAGPPGPPGPPGEAPMLPPELLFQRDTDRKKRAVNPEKEIAKNITEDVGKKNK
SKKGDIKEDLGGKFLDMYSSIYTMRQDLDRIRKPIGTREHPVRTCKDLFYGHPQFKDGWY
WIDPNLGMSDDAVFVYCNITGSGETCVFPDMHSSHMPNIPWRKEGDTNDWYSNLRGGFRI
TYETIGVVQMTFLRLLSQEAYQNFTYTCINSAAWFNPKTNNHDMAIKLLGENEIEYGTEG
IRPSVLVDGCKTRKSKSETVFEVRTKMLGNVPIVDFYPVDYGLPHQAFGFEVGPVCFK
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctcaggacttacgagatgacggcatggcccgtcctcgtcctcctgctgatt
atcaggacatcgacacaggatccggaagcagcagacggcttggtggatttacttcatgca
acacggatccacaacctgccgctaggggtgaacaagacaactggtatgtgtacgtcgcgc
ccggggtccgaacccgacgtagcgtacagcatcagcgagcgcacgatcctcacagtgcag
actgctcaactcttccccctggggttcccgtgggacttctcccttctgcttgtggtcagc
cccacgaaaggtgcgcggcgggctgcattcttcaccatctacagtgacactggagacgag
cagattgctgtgtccctgggcgatgacatcacattattttatgaagatcctgacacgaaa
cccacctcgaagaagaccatcagcttcggcgctgatattagcgatggcaaatggcatcgg
ctcgggttcagtgtaaaaggagatgcagcaacactaattctagactgcaaaaaacagatt
acaaaagagctggtccgacagacgtcgtcgaaaattagcacgacagggatcattctcatc
ggacaacagcttctggatgacatcctctacacgggagccgtgcaactgttcaagatctcc
ccaacccccgacgctgcgtatgaaatctgcacttcattcgccccggactgcgacaccgcc
atcggcgctacggaggctgtagatgacaacagagacgaggaagaggaggacgaagaggag
gatgaggaggaaggagaggaagaaatcgaagaagacttgtttcagatcaatggcacctct
gacccactcgtggttacccatgagtaccaacaaaacattactggcgaggaaggttctgga
gatgagtacacaggagttcatggaggcgattcgagataccactacatcacagcaaggggc
cctgctggtcccaggggctacatgggtccgcccggtgcgccaggcccccctggtcccaaa
gggcaaatgggtagagatggcattggtggaatcaacggcattccgggacctccaggccac
gtgttcatgataccgctgaacgtgcagggatacgataaagggccggaccagcatacggag
ctgttcagacaaatgctctctcaacacatgacggcgatgcgtggcagcgagggaccaatg
ggtctgactggaataccagggcctgaaggtccacctggccctgaaggcctcaagggagag
ccaggagatatcggagagccaggtcctcgtggtttgagaggaatgatgggacttccaggg
cgagaaggacgtcgaggccgtcctggaagggacggagaaagaggtgtaactggaccacca
ggagccaaaggcgagcaagggatacagggtctgccaggtctgccaggcgaaaagggagac
agaggtctaacaggaagtacaggggaacaaggacttccggggcatgacggaatgcagggt
gaagaaggtccaccaggtttaccaggcttgccgggagaactgggtccgcgtggttttccc
ggaccaaggggatttccaggtttgcctggcccaccaggcattccaggcagcgagggtcct
gtgggagctaagggcaacagtgggccgcctggacaacccggacaacctggtcaggctggt
cccgtgggtccaataggttcgccggggcctcaaggtcaactgggtcctcctggattagcg
ggcccccaaggaaaaccgggaatacctggacttccaggagctgacggagctcctggccac
cctggaaatcccggaatgccgggtgctaaaggagatattggctctccaggaccacaagga
cctgtgggattcccaggatcgcggggtgttaaaggtgacgaaggaaagagagggaatgca
ggcgacaaaggggacaaaggagacagaggtgctgatggtgagaaaggagacttaggaatg
aaaggagagcgtggaccaaatggaccgcccggcataccgggtttagagggtcctgaggga
ccgaagggttttgaggggccgcgaggagagactggaccaccaggacagcccggcgagaaa
ggaaaattgggcataccgggatttgccgggtaccctggtcctccgggcgagaaaggagac
aaaggttccgaaggcaagaacggccagccaggagaaaaaggagatcggggtaatccagga
cttccaggcgagcggggagaggcaggccctaggggttttcgcggttccagaggcagaaga
ggactcgaagggatcccaggacctaaaggtgatactggacaaccaggcccgccaggaccg
caaggagagacaggtcctcaaggtcctgaaggaccccgaggattttccggacctcaaggc
cctccaggaacaaacggaaaggacggagtacaaggacagcccggagaaagaggacctccg
ggagagccaggtccaactgggcctgccggggcgccaggagttgtcggaccgccaggccct
actggtgaacctggtcccgtaggtgaacctggaattccaggtcaacctggtcatccaggt
gagccaggacatccaggagaagcaggcaaagaggggcagacaggaccggcgggcccacaa
gggaaaccaggccctccaggtggaccgggattaccgggatttccaggcgagagaggtctg
tcgggattaccgggcatgccaggtctgaagggtgatatgggtcccattggtcctcctgga
ccacacggagacaaaggacaacaaggagatcctggcaaagaaggaccacctgggcccgag
ggtaggaaaggtcctcaaggaccaccaggacctgctggagctaaaggagagaggggcgag
gctggacttccgggagggactggccgcgacggactgccaggacagaggggtcttccaggg
ccaccaggtcctatgggatctccaggagaggatggagacaaaggtgactctggacctcca
ggagaaaaaggcttcaagggttcaagaggagaaacgggacctcccggccctccagggcct
caaggtcctcgaggagaacctggtgctctgggtcctcccggagagaagggtcctcctggt
gagatagggcgacaaggaactaaaggagaggatggccctgcaggagtggcgggtcctgcc
ggaccagcaggtccgcagggaataccaggacctcctgggatgaagggagagatcggtgac
attggagccaagggccctgagggtcctgctggtgcgccgggtgaacctggtcctcgtggg
agtaagggcggcgaggggattcctggaccacctgggccagagggtctacaaggtccaaaa
ggagaccccggtaatcccgggccaccaggaccaacaggcatagatggaaaacatggtgag
cgaggaccccctggaccaaagggagaagaagggaaaccaggagtccaggggcctccaggt
ccaagaggatcggtgggtcccgaaggcccaaagggcagtcctggtcctccgggtttcccg
ggaactgcaggagagcccggtttagtgggaccgaaaggagagcctggtaaagatggagca
gacgggcggccaggagatgctggtcctccgggagaggctgggcccccggggaagatgggg
cctgttggaccgccgggcaaagtgggatctgagggaccagcagggcagcaggggagtaca
ggtactcctggtgaaaaaggggacaaaggaccaccaggacctcctggtttacaaggaccg
ttaggacctcagggagttccaggttctcaagggtcaccaggcctaagaggatctcctggt
cctgctgtacctggaggggaaggtcttcctgggaaagtcggagagacgggtccgaaaggc
cccaaaggagatcgaggtcgaagaggtcctaagggccatcggggcgaattggggacatca
ggacacaagggagatatgggagagaagggcgagcgcggcatgaagggtcccacagggcca
gagggccctaaaggagagcctggccttcaaggtcctcagggacaaaagggtagcgatggt
ccacctgggctacccggacttgaaggaccaccaggaccgaaaggctctgagggtgtcggg
ggaacaaagggcgaacaaggacctgcaggacctcccggacctccaggtccgcccggggaa
gcaccaatgcttccccctgaacttctgtttcagcgcgatacggaccgcaagaagagggcc
gtgaacccagagaaagaaatagcaaagaatataactgaagatgttggaaagaagaacaaa
tctaaaaagggggatataaaagaagatcttggtggcaagttcctggatatgtacagctcc
atctacacaatgaggcaagaccttgacaggataaggaaacctattgggacacgggagcat
cctgtcaggacttgcaaggacctcttctatggacaccctcaatttaaagatggatggtac
tggattgaccctaacttgggcatgtcagatgatgctgtgtttgtttattgcaatattact
gggagtggggaaacctgtgtattccctgacatgcattccagtcatatgcccaacatccct
tggaggaaggaaggagatacgaatgactggtattcaaatttacgagggggatttaggatc
acatacgaaacaataggagttgtacagatgacattcctacggctgttaagccaagaggca
tatcagaatttcacatacacctgtatcaattcagctgcttggtttaacccgaagaccaac
aaccatgacatggcaataaaattgctgggtgaaaatgagattgaatacggcacagaggga
ataagacccagtgttctagttgatggatgcaagacacgcaagagcaaaagtgagacagtt
ttcgaagtacgtacaaagatgcttggcaacgtgcctatagtcgatttctatccagtagac
tatggcttaccacatcaagcatttgggtttgaggttgggccagtgtgtttcaagtga
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integrated database retrieval system
