KEGG   Zunongwangia profunda: ZPR_3654Help
Entry
ZPR_3654          CDS       T01216                                 

Definition
(GenBank) ATP-dependent DNA ligase family protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
zpr  Zunongwangia profunda
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:zpr00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    ZPR_3654
Enzymes [BR:zpr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ZPR_3654
DNA repair and recombination proteins [BR:zpr03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ZPR_3654
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(3948949..3951384)
Genome map
AA seq 811 aa AA seqDB search
MSLDEYQKKRNFSHTPEPTAEENSENLHRFVIQRHQARRLHYDLRLEIGGTLKSWAVPKG
PSMNPADKRLAVHTEDHPITYLKFEGEIPKGNYGAGQMDIWDEGQFSSALSDKNLLQQYQ
NGDLKLQFLGKKLKGEFALVNTKQGKDNHWLLIKKKDEFATDLIYDAEAYAVKTAVAHKK
GKAPKVRKLKPEDTVKPMLASTAKEIFNHPDWIYELKWDGYRLMAHVDDGKVRIYSRNGI
NYNSKFPKLVKDLEQIDHQVILDGEVVIVDKNGLPDFQALQNYHSKTPGTLRFYVFDMLF
LNGHSMLELPLKDRKSLIPEVLEGLDHTFYCDHIEGMGMTFYKKAIDSGMEGVIAKKNDS
TYALGYRTESWLKIKAVESEEAIICGYTDSKGAVFGSLILGMYKEGELTYVGNCGSGFSN
DQQKELLGKMESLAMESSPFAKKINLKGKTPNWIHPELICEVKFSEWTKAGALRHPVFKG
LRNDKTALEVQSEVQIKTPEPPDVSGQATSNSGNLDIEGISVPFTNLGKMYWPKEKIRKY
DLIEYYLQVSDTMLPYLLDRPQNLHRHPNGIQQKGFYQKDNESLPDWIHTTTIYSESANK
KIEYMLCQNEATLLYMVNLGCIEINPWHSKIQDLDRPDYGVIDLDPSTHNTFEEVIETAQ
VVKEVLDLAKIEGYCKTSGSRGLHIYIPFAGIYSYKEGRDFIKLLCYFVQDKLPELTSME
RAVKARKGKIYLDYLQNRRGQTIAAPYAVRPRKGATVSTPLKWDEVKSGLKITDFNIFNV
PHRLSEEGDLFSSLLSKPIDMEKAIGNLNAE
NT seq 2436 nt NT seq  +upstreamnt  +downstreamnt
gtgagtttagacgagtatcaaaagaaacgaaattttagtcatactcctgaacctacggct
gaagaaaatagcgaaaacttacatcgatttgtaattcagcgacaccaggccaggcgttta
cattacgatttgcgccttgaaattggtggcacccttaaaagttgggcggttcctaaaggt
ccatcaatgaaccctgctgataaacgacttgccgtacatacggaagatcaccctattaca
tatttaaaatttgaaggagaaattcccaaaggtaattatggcgctggccagatggatatt
tgggacgaaggtcaattttccagtgcactaagcgataaaaatctgcttcagcaatatcaa
aacggagatttgaaacttcaatttttaggaaaaaaacttaaaggcgaatttgcacttgta
aataccaagcagggcaaagacaaccattggttgctaattaaaaagaaggatgaatttgca
acagatcttatatatgatgcggaagcttatgctgtaaaaactgctgtagcacataaaaag
ggaaaagcgcccaaagtacgaaaactaaaacctgaagatactgtaaaaccaatgttggcc
tcaacagcaaaagaaatttttaatcatcccgattggatttatgagttaaaatgggacggt
tatcgattaatggcacatgtagatgatggtaaagttcgtatttattcccgaaacggaata
aattataattccaaattcccaaaactggtaaaggatttagagcagattgatcaccaggtg
attttggatggcgaagtggtgatcgtggataaaaatggtcttccggattttcaggcacta
caaaattaccatagcaaaactcccggaaccttaagattctatgtttttgatatgcttttt
ttaaatgggcatagtatgctagagctgccccttaaagaccgaaaaagtcttatcccagaa
gttttggaaggtttagaccatactttttattgcgatcatatagaaggtatggggatgact
ttttataaaaaagctattgatagtggcatggaaggagtgatcgccaaaaaaaatgattct
acctatgcactgggatatcgtaccgaaagctggctaaaaattaaagcggtagaaagtgaa
gaagctataatttgcggatataccgattctaaaggagctgtttttggatcactaatttta
gggatgtataaagagggagaacttacctatgtaggcaactgcggaagtggtttttctaac
gatcagcaaaaagaactgctaggaaaaatggaaagtcttgctatggaatcgtcccctttt
gccaaaaaaataaacctgaaaggcaaaactccaaactggatacatcctgaactgatttgt
gaagtgaagttttctgaatggaccaaagctggggcgttgcgacatccggtttttaaaggt
ttgcgtaacgataagaccgctctagaagtacagtcagaagtccaaattaaaactcctgaa
cctcctgatgtttcggggcaagcgacttcaaattcagggaatcttgatatagaagggatt
tcagtaccctttaccaatctgggtaaaatgtactggccaaaagaaaaaataagaaaatat
gatcttatagagtattaccttcaggtttcagacacaatgcttccatatctactagatcgt
ccgcaaaatttacatcgtcatcctaacggaattcagcaaaaaggtttttatcagaaggat
aacgaaagtttaccagattggatccatacaactactatttactcagaatctgcgaacaag
aagatcgagtatatgctgtgccaaaatgaagccactttattatatatggtaaatttgggg
tgtattgaaattaatccctggcactctaaaattcaggatttggatcggccagactatgga
gtgattgatttggatccttcaactcataatacttttgaggaggttattgaaactgcccag
gtggttaaagaggtgctggatttagcaaaaattgaagggtattgtaaaacttcaggatca
cgtggcctgcatatttatattccgtttgctggtatatattcttataaagaaggccgagat
tttataaaattactctgctattttgtacaggataaattgcctgaactcactagtatggaa
cgggcggtaaaagcccgaaaaggaaaaatttacctcgattatttacaaaatcgccgggga
caaaccattgcagcaccatatgctgttagacctcgaaaaggagcaacagtatcaacacct
ttaaaatgggatgaggtgaagagcggtttaaaaattactgattttaatatttttaatgtc
cctcatcgactttcagaagaaggggatcttttcagtagtctgctttccaaacccatcgat
atggaaaaagcaatcggaaatctgaatgccgaataa

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