Zygosaccharomyces rouxii: ZYRO0F11088g
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Entry
ZYRO0F11088g CDS
T01118
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03022
Basal transcription factors
zro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ZYRO0F11088g
09124 Replication and repair
03420 Nucleotide excision repair
ZYRO0F11088g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zro03021
]
ZYRO0F11088g
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0F11088g
Transcription machinery [BR:
zro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ZYRO0F11088g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ZYRO0F11088g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
bPH_7
Motif
Other DBs
NCBI-GeneID:
8205446
NCBI-ProteinID:
XP_002497680
UniProt:
C5DY86
LinkDB
All DBs
Position
F:906284..907813
Genome browser
AA seq
509 aa
AA seq
DB search
MSSQHLLKSSVNQYLEELPQQIQSRLYESPATCLAIYRLLPQLAKFFIMSMVFNESAISL
RDLDRWVKSSGKLQFQDAIKSMKSLHLLIPVRSNGPMLIDLNHTFRESFKNALTGGEVSN
SFGIVMELDNDTVTTDMLDKYSADKWETILHFMVGTSLAHIPSENVLNLLKHSKLMEESN
TTGEFKITNEGFQFLLQEVNSQLWALLLQYLKMTEMLQMDPVDILNFIFMLGALEFSKPY
STNGLSETQKVMLKDMRDYGLVFQMNSNANVFYPTRLASMLTSDPKSIRGASGAMDSVLK
QNKEDVLNKSGGAGANADDDADEIGSEGQNMQDGALIVETNFKLYSYSNSPLQIAILSLF
VHMKSRFSNMVTGQLTRESIRQALLNGITADQIIAYLETHAHPQMRRMAEEQLEKRLELD
PNSKDPLQILPPTVVDQIKLWQLELDRIISFEGSLYSDFENHQEFTLLSSYAQDIGVLIW
KDDRKKKFFVSKEGNSQVLDYAKRKLKKK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcagcatctgttgaaaagttcagttaaccaatacttggaagaattaccgcag
caaattcagagtaggttatatgaatctcctgctacatgtttggccatctacaggctctta
cctcaactggcaaagttttttattatgtcaatggttttcaatgaaagtgctatttcactt
cgtgatttagataggtgggttaaatctagtggtaaacttcaatttcaggatgctatcaaa
tctatgaagtccctgcatctgcttataccagttagaagtaatggaccgatgcttattgat
ctgaaccatacctttagggagagttttaaaaatgcattgaccggaggtgaagtgagtaat
tctttcggtattgttatggaattggataatgacacagtcactactgatatgttggacaag
tattcagctgataagtgggaaactattttgcatttcatggtagggacatctctggcgcat
ataccgtctgaaaacgttttaaaccttttaaaacacagtaaattgatggaagagagtaac
acgacgggggaattcaaaatcactaatgaggggtttcaatttcttctacaggaagtaaac
tcacaactgtgggcacttcttctacaatatttaaaaatgacagaaatgttacagatggat
ccagtggatatattgaattttatctttatgttgggtgcattagagtttagcaaaccatat
agcactaatggattatcagagactcaaaaagtcatgttaaaggatatgagagattacggt
ttggttttccaaatgaattccaatgcgaatgtcttttatccaacacgattggcatcgatg
ttaacatctgatcccaagagtattagaggtgcttctggtgccatggatagtgttctaaaa
caaaataaagaagatgttcttaataaaagcggtggtgcaggtgccaatgcagatgacgat
gcagatgaaatcggttctgagggccagaatatgcaagacggtgcattgatcgtggagacg
aatttcaaactatattcgtattcgaattcacctttgcaaattgccattttgagtcttttc
gttcatatgaaatcaagattttccaatatggttactggtcaattgacaagagaatctatt
agacaagcattgctaaatggtattacagcagatcaaattattgcatatttagagacacac
gctcatccacagatgagaaggatggctgaggagcaattagagaaaagattggaattggat
ccgaatagtaaagatccgttacaaattttaccacctacggttgtagatcaaattaaattg
tggcaattggaattggatagaattattagtttcgaaggatcactttactctgattttgaa
aaccatcaggaattcaccttacttagctcctacgctcaggatattggcgttttaatatgg
aaggatgataggaagaagaaattcttcgtctctaaggaaggtaattctcaagttctcgat
tatgcaaagagaaagttgaagaagaaataa
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