KEGG   PATHWAY: vfm02020
Entry
vfm02020                    Pathway                                
Name
Two-component system - Aliivibrio fischeri MJ11
Description
Two-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor protein-histidine kinase (HK) and a response regulator (RR). In the prototypical two-component pathway, the sensor HK phosphorylates its own conserved His residue in response to a signal(s) in the environment. Subsequently, the phosphoryl group of HK is transferred onto a specific Asp residue on the RR. The activated RR can then effect changes in cellular physiology, often by regulating gene expression. Two-component pathways thus often enable cells to sense and respond to stimuli by inducing changes in transcription.
Class
Environmental Information Processing; Signal transduction
Pathway map
vfm02020  Two-component system
vfm02020

Other DBs
GO: 0000160
Organism
Aliivibrio fischeri MJ11 [GN:vfm]
Gene
VFMJ11_2124  phoR; phosphate regulon sensor kinase PhoR [KO:K07636] [EC:2.7.13.3]
VFMJ11_2125  phoB; phosphate regulon transcriptional regulatory protein PhoB [KO:K07657]
VFMJ11_2123  phosphate-binding protein [KO:K02040]
VFMJ11_1720  phosphate-binding protein [KO:K02040]
VFMJ11_A0568  phosphate-binding protein [KO:K02040]
VFMJ11_0527  sensor protein PhoQ [KO:K07637] [EC:2.7.13.3]
VFMJ11_0526  sensor protein PhoQ [KO:K07637] [EC:2.7.13.3]
VFMJ11_0528  transcriptional regulatory protein PhoP [KO:K07660]
VFMJ11_0107  transporter, drug/metabolite exporter family [KO:K07790]
VFMJ11_0113  osmolarity sensor protein EnvZ [KO:K07638] [EC:2.7.13.3]
VFMJ11_0112  protein PetR [KO:K07659]
VFMJ11_2466  sensor protein CpxA [KO:K07640] [EC:2.7.13.3]
VFMJ11_2465  transcriptional regulatory protein CpxR [KO:K07662]
VFMJ11_2336  protease DegQ [KO:K04771] [EC:3.4.21.107]
VFMJ11_A0212  sensor protein IrlS [KO:K07644] [EC:2.7.13.3]
VFMJ11_A0213  transcriptional activator protein IrlR [KO:K07665]
VFMJ11_A0493  copper/silver resistance periplasmic protein [KO:K07798]
VFMJ11_A0494  heavy metal efflux pump, CzcA family [KO:K07787]
VFMJ11_2184  flagellin [KO:K02406]
VFMJ11_1993  A-type flagellin [KO:K02406]
VFMJ11_1994  A-type flagellin [KO:K02406]
VFMJ11_1995  flagellin subunit C [KO:K02406]
VFMJ11_1996  flagellin [KO:K02406]
VFMJ11_1998  A-type flagellin [KO:K02406]
VFMJ11_1966  RNA polymerase sigma factor for flagellar operon (Sigma-F factor)(Sigma-28) [KO:K02405]
VFMJ11_0734  chemotaxis protein PomA [KO:K02556]
VFMJ11_A0220  chemotaxis MotA protein [KO:K02556]
VFMJ11_1733  torS; tmao reductase sytem sensor tors [KO:K07647] [EC:2.7.13.3]
VFMJ11_1673  TorCAD operon transcriptional regulatory protein TorR [KO:K07772]
VFMJ11_A0335  torC; trimethylamine-N-oxide reductase c-type cytochrome TorC [KO:K03532]
VFMJ11_A0336  torA; trimethylamine-N-oxide reductase TorA [KO:K07811] [EC:1.7.2.3]
VFMJ11_1674  chaperone protein TorD [KO:K03533]
VFMJ11_2228  aerobic respiration control sensor protein ArcB [KO:K07648] [EC:2.7.13.3]
VFMJ11_2226  aerobic respiration control protein ArcA [KO:K07773]
VFMJ11_1919  TctA protein [KO:K07793]
VFMJ11_1918  tricarboxylic transport TctB [KO:K07794]
VFMJ11_1917  tricarboxylic transport protein TctC [KO:K07795]
VFMJ11_0009  dnaA; chromosomal replication initiator protein DnaA [KO:K02313]
VFMJ11_1165  C4-dicarboxylate membrane transporter [KO:K07792]
VFMJ11_2170  C4-dicarboxylate membrane transporter [KO:K07792]
VFMJ11_1654  NAD-dependent malic enzyme [KO:K00027] [EC:1.1.1.38]
VFMJ11_2042  nitrate/nitrite sensor protein NarQ [KO:K07674] [EC:2.7.13.3]
VFMJ11_2043  nitrate/nitrite response regulator protein NarP [KO:K07685]
VFMJ11_2456  frdA; fumarate reductase, flavoprotein subunit [KO:K00244] [EC:1.3.5.1]
VFMJ11_2457  fumarate reductase iron-sulfur subunit [KO:K00245] [EC:1.3.5.1]
VFMJ11_2458  fumarate reductase subunit C [KO:K00246]
VFMJ11_2459  fumarate reductase subunit D [KO:K00247]
VFMJ11_A0063  regulatory protein UhpC [KO:K07783]
VFMJ11_A0065  sensor protein UhpB [KO:K07675] [EC:2.7.13.3]
VFMJ11_A0066  transcriptional regulatory protein UhpA [KO:K07686]
VFMJ11_A0067  hexose phosphate transport protein [KO:K07784]
VFMJ11_2187  signal transduction histidine-protein kinase BarA [KO:K07678] [EC:2.7.13.3]
VFMJ11_1747  response regulator UvrY [KO:K07689]
VFMJ11_0541  csrA; carbon storage regulator [KO:K03563]
VFMJ11_A0963  P pilus assembly protein, chaperone PapD [KO:K07346]
VFMJ11_A0962  P pilus assembly protein, porin PapC [KO:K07347]
VFMJ11_0512  conserved domain protein [KO:K02651]
VFMJ11_A0252  conserved domain protein [KO:K02651]
VFMJ11_0514  cpaB_1; Flp pilus assembly protein CpaB [KO:K02279]
VFMJ11_A0254  cpaB_2; Flp pilus assembly protein CpaB [KO:K02279]
VFMJ11_0515  general secretion pathway protein D [KO:K02280]
VFMJ11_A0255  general secretion pathway protein D [KO:K02280]
VFMJ11_A0257  ATPase involved in chromosome partitioning [KO:K02282]
VFMJ11_0517  ATPase involved in chromosome partitioning [KO:K02282]
VFMJ11_0518  TadA [KO:K02283] [EC:7.4.2.8]
VFMJ11_A0258  TadA [KO:K02283] [EC:7.4.2.8]
VFMJ11_A0259  Flp pilus assembly protein TadB [KO:K12510]
VFMJ11_0519  Flp pilus assembly protein TadB [KO:K12510]
VFMJ11_A0260  bipartite nuclear localization signal containing protein [KO:K12511]
VFMJ11_0520  bipartite nuclear localization signal containing protein [KO:K12511]
VFMJ11_2098  glnD; protein-P-II uridylyltransferase [KO:K00990] [EC:2.7.7.59]
VFMJ11_2077  nitrogen regulatory protein P-II [KO:K04751]
VFMJ11_0094  nitrogen regulation protein NtrB [KO:K07708] [EC:2.7.13.3]
VFMJ11_0093  ntrC; nitrogen regulation protein [KO:K07712]
VFMJ11_0096  glnA; glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
VFMJ11_0378  rpoN; RNA polymerase sigma-54 factor [KO:K03092]
VFMJ11_2298  fimbrial protein (Pilin) (Strain P1) [KO:K02650]
VFMJ11_2010  cheR; CheR methyltransferase, SAM binding domain [KO:K00575] [EC:2.1.1.80]
VFMJ11_0813  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_1169  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_1450  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_1043  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_1207  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_1596  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_1732  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_1906  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_1916  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_2272  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_2347  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_A0073  toxin corregulated pilus biosynthesis protein I [KO:K03406]
VFMJ11_A0131  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_A0363  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_A0205  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_A0206  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_A0428  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_A0497  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_A0498  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_A0765  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_A1192  methyl-accepting chemotaxis protein [KO:K03406]
VFMJ11_B0155  histidine kinase [KO:K03406]
VFMJ11_A0115  aerotaxis receptor [KO:K03776]
VFMJ11_1959  chemotaxis protein CheW [KO:K03408]
VFMJ11_1960  CheW domain protein [KO:K03408]
VFMJ11_1963  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
VFMJ11_1127  chemotaxis protein CheY [KO:K03413]
VFMJ11_1965  chemotaxis protein CheY [KO:K03413]
VFMJ11_1962  chemotaxis response regulator protein-glutamate methylesterase [KO:K03412] [EC:3.1.1.61 3.5.1.44]
VFMJ11_2011  CheV [KO:K03415]
VFMJ11_A0929  chemotaxis protein CheV [KO:K03415]
VFMJ11_A0785  chemotaxis protein CheV [KO:K03415]
VFMJ11_0727  autoinducer 2-binding periplasmic protein LuxP [KO:K10910]
VFMJ11_0728  autoinducer 2 sensor kinase/phosphatase LuxQ [KO:K10909] [EC:2.7.13.3 3.1.3.-]
VFMJ11_1118  autoinducer 1 sensor kinase/phosphatase LuxN [KO:K15850] [EC:2.7.13.3 3.1.3.-]
VFMJ11_0979  LuxU [KO:K10911]
VFMJ11_A1147  transcriptional regulator, LuxO family [KO:K10912]
VFMJ11_0978  transcriptional regulatory protein ZraR [KO:K10912]
VFMJ11_2291  LitR, transcriptional regulator [KO:K10913]
VFMJ11_A1041  acyl-CoA reductase [KO:K03400] [EC:1.2.1.50]
VFMJ11_A1040  acyl transferase [KO:K15853] [EC:2.3.1.-]
VFMJ11_A1039  alkanal monooxygenase alpha chain (Bacterial luciferasealpha chain) [KO:K00494] [EC:1.14.14.3]
VFMJ11_A1038  alkanal monooxygenase beta chain (Bacterial luciferasebeta chain) [KO:K15854] [EC:1.14.14.3]
VFMJ11_A1037  long-chain-fatty-acid--luciferin-component ligase (Acyl-protein synthetase) [KO:K06046] [EC:6.2.1.19]
VFMJ11_A0125  two component system histidine kinase [KO:K13040] [EC:2.7.13.3]
VFMJ11_A0126  transcriptional regulatory protein FixJ [KO:K13041]
VFMJ11_1988  FlrA; sigma-54-dependent transcriptional activator [KO:K10941]
VFMJ11_1987  FlrB; two-component sensor kinase [KO:K10942] [EC:2.7.13.3]
VFMJ11_1986  two-component response regulator [KO:K10943]
VFMJ11_2392  cyclic nucleotide-binding domain protein [KO:K10914]
VFMJ11_0423  thermolabile glutaminase (Glutaminase A) [KO:K01425] [EC:3.5.1.2]
VFMJ11_2331  petA; ubiquinol-Cytochrome c reductase, iron-sulfur subunit [KO:K00411] [EC:7.1.1.8]
VFMJ11_2330  cytochrome B [KO:K00412]
VFMJ11_2329  cytochrome c1 [KO:K00413]
VFMJ11_1377  ccoN; cytochrome c oxidase, Cbb3-type, subunit I [KO:K00404] [EC:7.1.1.9]
VFMJ11_1378  ccoO; cytochrome c oxidase, Cbb3-type, subunit II [KO:K00405]
VFMJ11_1379  ccoQ; cytochrome c oxidase, Cbb3-type, CcoQ subunit [KO:K00407]
VFMJ11_1380  ccoP; cytochrome c oxidase, Cbb3-type, subunit III [KO:K00406]
VFMJ11_0994  cytochrome D ubiquinol oxidase subunit 1 [KO:K00425] [EC:7.1.1.7]
VFMJ11_0995  cydB; cytochrome D ubiquinol oxidase, subunit II [KO:K00426] [EC:7.1.1.7]
VFMJ11_2344  TolC protein [KO:K12340]
VFMJ11_0153  putative polysaccharide export protein GfcE [KO:K01991]
VFMJ11_0155  Low molecular weight protein-tyrosine-phosphatase etp [KO:K25307] [EC:3.1.3.48]
VFMJ11_0156  tyrosine-protein kinase wzc [KO:K16692] [EC:2.7.10.3]
VFMJ11_2013  negative regulator of flagellin synthesis FlgM [KO:K02398]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00034  Manganese
C00036  Oxaloacetate
C00038  Zinc cation
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00070  Copper
C00088  Nitrite
C00092  D-Glucose 6-phosphate
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00164  Acetoacetate
C00237  CO
C00238  Potassium cation
C00244  Nitrate
C00282  Hydrogen
C00291  Nickel
C00305  Magnesium cation
C00399  Ubiquinone
C00533  Nitric oxide
C00547  L-Noradrenaline
C00697  Nitrogen
C00788  L-Adrenaline
C00828  Menaquinone
C01019  L-Fucose
C01104  Trimethylamine N-oxide
C01667  Bacitracin
C02084  Tetrathionate
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05818  2-Demethylmenaquinone
C06230  Fe-enterobactin
C06689  Vancomycin
C06696  Lead
C11612  Polymyxin B
C11842  N-(3-(S)-Hydroxybutyryl)homoserine lactone
C11849  3-Hydroxy-palmitic acid methyl ester
C12008  Ramoplanin A2
C13768  Colistin sulfate
C14819  Fe3+
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C16665  12-Methyltetradecanoic acid
C18206  cis-11-Methyl-2-dodecenoic acid
C21220  AIP-1
C21221  CSP
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21245  AgrD1 peptide
D07746  Colistin (INN)
D08401  Polymyxin B (INN)
Reference
  Authors
Yamamoto K, Hirao K, Oshima T, Aiba H, Utsumi R, Ishihama A.
  Title
Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli.
  Journal
J Biol Chem 280:1448-56 (2005)
DOI:10.1074/jbc.M410104200
Reference
  Authors
Abdel-Fattah WR, Chen Y, Eldakak A, Hulett FM.
  Title
Bacillus subtilis phosphorylated PhoP: direct activation of the E(sigma)A- and repression of the E(sigma)E-responsive phoB-PS+V promoters during pho response.
  Journal
J Bacteriol 187:5166-78 (2005)
DOI:10.1128/JB.187.15.5166-5178.2005
Reference
  Authors
Navarre WW, Halsey TA, Walthers D, Frye J, McClelland M, Potter JL, Kenney LJ, Gunn JS, Fang FC, Libby SJ.
  Title
Co-regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ.
  Journal
Mol Microbiol 56:492-508 (2005)
DOI:10.1111/j.1365-2958.2005.04553.x
Reference
  Authors
Cai SJ, Inouye M.
  Title
EnvZ-OmpR interaction and osmoregulation in Escherichia coli.
  Journal
J Biol Chem 277:24155-61 (2002)
DOI:10.1074/jbc.M110715200
Reference
  Authors
Batchelor E, Walthers D, Kenney LJ, Goulian M.
  Title
The Escherichia coli CpxA-CpxR envelope stress response system regulates expression of the porins ompF and ompC.
  Journal
J Bacteriol 187:5723-31 (2005)
DOI:10.1128/JB.187.16.5723-5731.2005
Reference
  Authors
Nagakubo S, Nishino K, Hirata T, Yamaguchi A.
  Title
The putative response regulator BaeR stimulates multidrug resistance of Escherichia coli via a novel multidrug exporter system, MdtABC.
  Journal
J Bacteriol 184:4161-7 (2002)
DOI:10.1128/JB.184.15.4161-4167.2002
Reference
  Authors
Hagiwara D, Yamashino T, Mizuno T.
  Title
A Genome-wide view of the Escherichia coli BasS-BasR two-component system implicated in iron-responses.
  Journal
Biosci Biotechnol Biochem 68:1758-67 (2004)
DOI:10.1271/bbb.68.1758
Reference
  Authors
Munson GP, Lam DL, Outten FW, O'Halloran TV.
  Title
Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12.
  Journal
J Bacteriol 182:5864-71 (2000)
DOI:10.1128/JB.182.20.5864-5871.2000
Reference
  Authors
Sperandio V, Torres AG, Kaper JB.
  Title
Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli.
  Journal
Mol Microbiol 43:809-21 (2002)
DOI:10.1046/j.1365-2958.2002.02803.x
Reference
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Epstein W.
  Title
The roles and regulation of potassium in bacteria.
  Journal
Prog Nucleic Acid Res Mol Biol 75:293-320 (2003)
DOI:10.1016/S0079-6603(03)75008-9
Reference
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  Title
The TorR high-affinity binding site plays a key role in both torR autoregulation and torCAD operon expression in Escherichia coli.
  Journal
J Bacteriol 182:961-6 (2000)
DOI:10.1128/JB.182.4.961-966.2000
Reference
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  Title
Identification of a quinone-sensitive redox switch in the ArcB sensor kinase.
  Journal
Proc Natl Acad Sci U S A 101:13318-23 (2004)
DOI:10.1073/pnas.0403064101
Reference
PMID:2666399
  Authors
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  Title
Genetic regulation of the tricarboxylate transport operon (tctI) of Salmonella typhimurium.
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J Bacteriol 171:4436-41 (1989)
DOI:10.1128/JB.171.8.4436-4441.1989
Reference
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  Title
A novel two-component regulatory system in Bacillus subtilis for the survival of severe secretion stress.
  Journal
Mol Microbiol 41:1159-72 (2001)
DOI:10.1046/j.1365-2958.2001.02576.x
Reference
  Authors
Zhang X, Hulett FM.
  Title
ResD signal transduction regulator of aerobic respiration in Bacillus subtilis: ctaA promoter regulation.
  Journal
Mol Microbiol 37:1208-19 (2000)
DOI:10.1046/j.1365-2958.2000.02076.x
Reference
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  Title
A VicRK signal transduction system in Streptococcus mutans affects gtfBCD, gbpB, and ftf expression, biofilm formation, and genetic competence development.
  Journal
J Bacteriol 187:4064-76 (2005)
DOI:10.1128/JB.187.12.4064-4076.2005
Reference
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He H, Zahrt TC.
  Title
Identification and characterization of a regulatory sequence recognized by Mycobacterium tuberculosis persistence regulator MprA.
  Journal
J Bacteriol 187:202-12 (2005)
DOI:10.1128/JB.187.1.202-212.2005
Reference
  Authors
Hutchings MI
  Title
Unusual two-component signal transduction pathways in the actinobacteria.
  Journal
Adv Appl Microbiol 61:1-26 (2007)
DOI:10.1016/S0065-2164(06)61001-0
Reference
  Authors
Kramer R
  Title
Osmosensing and osmosignaling in Corynebacterium glutamicum.
  Journal
Amino Acids 37:487-97 (2009)
DOI:10.1007/s00726-009-0271-6
Reference
PMID:7751278
  Authors
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  Title
Oxygen-insensitive synthesis of the photosynthetic membranes of Rhodobacter sphaeroides: a mutant histidine kinase.
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J Bacteriol 177:2695-706 (1995)
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Reference
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  Title
In vitro evidence of two-component system phosphorylation between the Mycobacterium tuberculosis TrcR/TrcS proteins.
  Journal
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Reference
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  Title
In vivo effects of sporulation kinases on mutant Spo0A proteins in Bacillus subtilis.
  Journal
J Bacteriol 183:6573-8 (2001)
DOI:10.1128/JB.183.22.6573-6578.2001
Reference
  Authors
Kaspar S, Bott M.
  Title
The sensor kinase CitA (DpiB) of Escherichia coli functions as a high-affinity citrate receptor.
  Journal
Arch Microbiol 177:313-21 (2002)
DOI:10.1007/s00203-001-0393-z
Reference
  Authors
Janausch IG, Garcia-Moreno I, Unden G.
  Title
Function of DcuS from Escherichia coli as a fumarate-stimulated histidine protein kinase in vitro.
  Journal
J Biol Chem 277:39809-14 (2002)
DOI:10.1074/jbc.M204482200
Reference
PMID:8550490
  Authors
Brunskill EW, Bayles KW.
  Title
Identification and molecular characterization of a putative regulatory locus that affects autolysis in Staphylococcus aureus.
  Journal
J Bacteriol 178:611-8 (1996)
DOI:10.1128/JB.178.3.611-618.1996
Reference
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Fujimoto DF, Brunskill EW, Bayles KW.
  Title
Analysis of genetic elements controlling Staphylococcus aureus lrgAB expression: potential role of DNA topology in SarA regulation.
  Journal
J Bacteriol 182:4822-8 (2000)
DOI:10.1128/JB.182.17.4822-4828.2000
Reference
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Dufour P, Jarraud S, Vandenesch F, Greenland T, Novick RP, Bes M, Etienne J, Lina G.
  Title
High genetic variability of the agr locus in Staphylococcus species.
  Journal
J Bacteriol 184:1180-6 (2002)
DOI:10.1128/JB.184.4.1180-1186.2002
Reference
PMID:8501030
  Authors
Rabin RS, Stewart V.
  Title
Dual response regulators (NarL and NarP) interact with dual sensors (NarX and NarQ) to control nitrate- and nitrite-regulated gene expression in Escherichia coli K-12.
  Journal
J Bacteriol 175:3259-68 (1993)
DOI:10.1128/JB.175.11.3259-3268.1993
Reference
PMID:9220011
  Authors
Chiang RC, Cavicchioli R, Gunsalus RP.
  Title
'Locked-on' and 'locked-off' signal transduction mutations in the periplasmic domain of the Escherichia coli NarQ and NarX sensors affect nitrate- and nitrite-dependent regulation by NarL and NarP.
  Journal
Mol Microbiol 24:1049-60 (1997)
DOI:10.1046/j.1365-2958.1997.4131779.x
Reference
  Authors
Verhamme DT, Postma PW, Crielaard W, Hellingwerf KJ.
  Title
Cooperativity in signal transfer through the Uhp system of Escherichia coli.
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Related
pathway
vfm00190  Oxidative phosphorylation
vfm00550  Peptidoglycan biosynthesis
vfm00910  Nitrogen metabolism
vfm02030  Bacterial chemotaxis
vfm02040  Flagellar assembly
vfm03070  Bacterial secretion system
KO pathway
ko02020   
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