Hsero_2270 Ku domain containing protein
       Hsero_2271 ATP-dependent DNA ligase protein

K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]

       Hsero_0848 ogT; methylated-DNA-protein-cysteine S-methyltransferase protein
       Hsero_0054 ogt; methylated-DNA-protein-cysteine methyltransferase protein
       Hsero_0417 phrB; deoxyribodipyrimidine photolyase protein
       Hsero_1860 phrB; deoxyribodipyrimidine photolyase (photoreactivation) protein
       Hsero_3159 uracil DNA glycosylase protein
       Hsero_3914 mutY; A/G-specific adenine glycosylase protein
       Hsero_1620 nth; endonuclease III protein
       Hsero_1297 ATP-dependent Rad3-related DNA helicase c2 protein
       Hsero_0351 mutT; MutT pyrophosphohydrolase protein
       Hsero_4579 NTP pyrophosphohydrolase (NUDIX hydrolase) protein
       Hsero_1401 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase protein
       Hsero_1678 ada; O6-methylguanine-DNA methyltransferase protein
       Hsero_3726 deoxyribodipyrimidine photolyase protein
       Hsero_1680 alkB; DNA repair system specific for alkylated DNA repair protein
       Hsero_2147 uracil-DNA glycosylase protein
       Hsero_1871 alkA; 3-methyl-adenine DNA glycosylase II protein
       Hsero_1437 tag; DNA-3-methyladenine glycosylase I protein
       Hsero_3915 mutM; formamidopyrimidine-DNA glycosylase protein
       Hsero_3115 xthA; exodeoxyribonuclease III protein
       Hsero_4676 xthA; exodeoxyribonuclease III protein
       Hsero_2781 recJ; single-stranded-DNA-specific exonuclease protein
       Hsero_2167 lig; NAD-dependent DNA ligase (contains BRCT domain type II) protein
       Hsero_0454 polA; DNA polymerase I protein
       Hsero_3964 uvrA; excinuclease ATPase subunit protein
       Hsero_3158 uvrB; excinuclease ABC subunit B (SOS response excision nuclease DNA repair ATP-binding) protein
       Hsero_1942 uvrC; excinuclease ABC subunit C (SOS response DNA repair protein) protein
       Hsero_2272 uvrC; nuclease subunit of the excinuclease complex protein
       Hsero_0434 uvrD; ATP-dependent DNA helicase protein
       Hsero_2779 uvrD; ATP-dependent DNA helicase protein
       Hsero_0105 rpoB; DNA-directed RNA polymerase subunit beta protein
       Hsero_0106 rpoC; DNA-directed RNA polymerase subunit beta protein
       Hsero_0140 rpoA; DNA-directed RNA polymerase alpha chain protein
       Hsero_2129 rpoZ; DNA-directed RNA polymerase omega subunit protein
       Hsero_3025 mfd; transcription-repair ATP-dependent coupling factor (helicase superfamily II) protein
       Hsero_3270 mutS; DNA mismatch repair protein
       Hsero_0834 mutL; DNA mismatch repair protein
       Hsero_3629 sbcB; exodeoxyribonuclease I (3'-> 5' specific) protein
       Hsero_1166 xseA; exodeoxyribonuclease VII, large subunit protein
       Hsero_3833 xseB; exodeoxyribonuclease VII small subunit protein
       Hsero_3571 dnaE; DNA polymerase III (alpha chain) protein
       Hsero_0002 dnaN; DNA polymerase III subunit beta protein
       Hsero_1449 holC; DNA polymerase III (chi subunit) protein
       Hsero_0593 holA; DNA polymerase III (delta subunit) protein
       Hsero_2600 holB; DNA polymerase III delta subunit protein
       Hsero_3415 dnaQ; DNA polymerase III, epsilon subunit, protein
       Hsero_3681 dnaX; DNA polymerase III (subunits tau and gamma) protein
       Hsero_3961 ssb; single-strand DNA-binding protein (helix-destabilizing protein)
       Hsero_0655 recA; recombinase A protein
       Hsero_0421 ruvA; Holliday junction DNA resolvase, DNA-binding subunit protein
       Hsero_0422 ruvB; Holliday junction resolvase, DNA helicase subunit protein
       Hsero_0419 ruvC; Holliday junction resolvasome, endonuclease subunit protein
       Hsero_4356 priA; primosomal protein N' (replication factor Y)-superfamily II helicase protein
       Hsero_2075 priB; primosomal replication N protein
       Hsero_2151 radA; ATP-dependent serine protease protein
       Hsero_1227 recG; TP-dependent DNA helicase RecG protein
       Hsero_1938 recO; DNA repair protein
       Hsero_3678 recR; rocombinational DNA repair protein
       Hsero_0612 recN; DNA repair protein
       Hsero_4329 rdgC; DNA recombination-dependent growth factor C protein
       Hsero_0862 uvrD; ATP-dependent DNA helicase protein
       Hsero_0861 inactivated superfamily I helicase
       Hsero_3555 ATPase protein
       Hsero_2270 Ku domain containing protein
       Hsero_2271 ATP-dependent DNA ligase protein
       Hsero_3695 gyrA; DNA gyrase subunit A protein
       Hsero_0003 gyrB; DNA gyrase subunit B protein
       Hsero_0326 HU histone family DNA-binding protein
       Hsero_0414 fis; factor-for-inversion-stimulation transcription regulator protein
       Hsero_1983 ihfA; integration host factor alpha-subunit protein
       Hsero_3688 ihfB; integration host factor beta-subunit (IHF-beta) protein
       Hsero_0494 recQ; ATP-dependent DNA helicase protein
       Hsero_2876 hns; Ler DNA-binding protein H-NS
       Hsero_4328 dinP; nucleotidyltransferase/DNA polymerase involved in DNA repair protein
       Hsero_3470 umuD; SOS mutagenesis protein
       Hsero_2073 lexA; SOS-response transcription repressor (RecA-mediated autopeptidases) protein
       Hsero_2440 polB; DNA polymerase II protein
       Hsero_2260 conserved hypothetical protein
       Hsero_2259 DNA polymerase, Y family protein
       Hsero_2258 dnaE; DNA polymerase III, alpha subunit protein
       Hsero_0656 recX; RecA-regulatory protein
       Hsero_2383 DNA polymerase IV protein
       Hsero_4320 rep; ATP-dependent DNA helicase rep protein
       Hsero_2964 dinG; ATP-dependent DNA helicase protein
       Hsero_2277 ATP-dependent helicase superfamily II protein
       Hsero_0380 nrdA; ribonucleoside reductase (large chain) oxidoreductase protein
       Hsero_0381 nrdB; transmembrane ribonucleoside reductase (small chain) protein

K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]