09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:tpep03030]
A0127_08095 hypothetical protein A0127_01065 ribonuclease HII A0127_03840 DNA polymerase A0127_05730 DNA polymerase II A0127_05725 DNA polymerase II large subunit A0127_06210 DNA primase A0127_06215 DNA primase A0127_02055 DNA polymerase sliding clamp A0127_04265 Replication factor C small subunit A0127_04260 replication protein C A0127_08495 flap structure-specific endonuclease A0127_04830 DNA ligase
K02316 dnaG; DNA primase [EC:2.7.7.101] K03470 rnhB; ribonuclease HII [EC:3.1.26.4] K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] K02683 priS; DNA primase small subunit [EC:2.7.7.102] K18882 priL; DNA primase large subunit K04802 PCNA; proliferating cell nuclear antigen K04801 rfcS; replication factor C small subunit K04800 rfcL; replication factor C large subunit K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
03410 Base excision repair [PATH:tpep03410]
A0127_09220 endonuclease III A0127_02055 DNA polymerase sliding clamp A0127_08495 flap structure-specific endonuclease A0127_04830 DNA ligase A0127_02585 3-methyladenine DNA glycosylase A0127_08550 uracil-DNA glycosylase A0127_04815 uracil-DNA glycosylase A0127_03135 hypothetical protein A0127_08660 single-stranded DNA endonuclease
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K04802 PCNA; proliferating cell nuclear antigen K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
03420 Nucleotide excision repair [PATH:tpep03420]
A0127_05695 hypothetical protein A0127_01165 DNA repair helicase A0127_02055 DNA polymerase sliding clamp A0127_04830 DNA ligase
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] K04802 PCNA; proliferating cell nuclear antigen K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
03430 Mismatch repair [PATH:tpep03430]
A0127_01550 DNA mismatch repair protein A0127_05695 hypothetical protein A0127_08660 single-stranded DNA endonuclease A0127_02055 DNA polymerase sliding clamp A0127_04830 DNA ligase
K07456 mutS2; DNA mismatch repair protein MutS2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K04802 PCNA; proliferating cell nuclear antigen K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
03440 Homologous recombination
03450 Non-homologous end-joining
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:tpep03000]
03021 Transcription machinery [BR:tpep03021]
03019 Messenger RNA biogenesis [BR:tpep03019]
03041 Spliceosome
03011 Ribosome [BR:tpep03011]
03009 Ribosome biogenesis [BR:tpep03009]
03016 Transfer RNA biogenesis [BR:tpep03016]
03012 Translation factors [BR:tpep03012]
03110 Chaperones and folding catalysts [BR:tpep03110]
04131 Membrane trafficking [BR:tpep04131]
04121 Ubiquitin system [BR:tpep04121]
03051 Proteasome [BR:tpep03051]
03032 DNA replication proteins [BR:tpep03032]
A0127_02055 DNA polymerase sliding clamp A0127_08495 flap structure-specific endonuclease A0127_04830 DNA ligase A0127_09720 ribosome biogenesis protein A0127_07630 H/ACA RNA-protein complex component Cbf5p A0127_08095 hypothetical protein A0127_05735 cell division control protein Cdc6 A0127_06210 DNA primase A0127_06215 DNA primase A0127_02050 hypothetical protein A0127_07110 hypothetical protein A0127_01065 ribonuclease HII A0127_03840 DNA polymerase A0127_05725 DNA polymerase II large subunit A0127_05730 DNA polymerase II A0127_04260 replication protein C A0127_04265 Replication factor C small subunit A0127_01100 DNA topoisomerase VI A0127_01095 DNA topoisomerase VI subunit B A0127_09770 DNA topoisomerase I A0127_02325 reverse gyrase
K04802 PCNA; proliferating cell nuclear antigen K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] K02316 dnaG; DNA primase [EC:2.7.7.101] K10725 cdc6A; archaeal cell division control protein 6 K02683 priS; DNA primase small subunit [EC:2.7.7.102] K18882 priL; DNA primase large subunit K09723 ginS; DNA replication factor GINS K09723 ginS; DNA replication factor GINS K03470 rnhB; ribonuclease HII [EC:3.1.26.4] K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] K04800 rfcL; replication factor C large subunit K04801 rfcS; replication factor C small subunit K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
03036 Chromosome and associated proteins [BR:tpep03036]
03400 DNA repair and recombination proteins [BR:tpep03400]
A0127_04925 cysteine methyltransferase A0127_09220 endonuclease III A0127_02055 DNA polymerase sliding clamp A0127_08495 flap structure-specific endonuclease A0127_04830 DNA ligase A0127_01165 DNA repair helicase A0127_03955 NUDIX hydrolase A0127_08550 uracil-DNA glycosylase A0127_04815 uracil-DNA glycosylase A0127_02585 3-methyladenine DNA glycosylase A0127_03135 hypothetical protein A0127_00565 endonuclease V A0127_08660 single-stranded DNA endonuclease A0127_05695 hypothetical protein A0127_01550 DNA mismatch repair protein A0127_04305 DNA repair protein Rad50 A0127_04300 double-stranded DNA repair protein Mre11 A0127_00220 subtype I-B CRISPR-associated endonuclease Cas1 A0127_05745 DNA repair and recombination protein RadA A0127_04230 DNA repair protein RadB A0127_09060 Holliday junction resolvase A0127_04295 DNA helicase A0127_04310 5'-3' exonuclease A0127_03500 ATP-dependent DNA helicase A0127_09770 DNA topoisomerase I A0127_01250 helicase A0127_00075 large helicase A0127_06450 ribonucleotide-diphosphate reductase subunit alpha A0127_02090 phosphoesterase A0127_09870 hypothetical protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K04802 PCNA; proliferating cell nuclear antigen K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K07456 mutS2; DNA mismatch repair protein MutS2 K03546 sbcC; DNA repair protein SbcC/Rad50 K03547 sbcD; DNA repair protein SbcD/Mre11 K15342 cas1; CRISP-associated protein Cas1 K04483 radA; DNA repair protein RadA K04484 radB; DNA repair protein RadB K03552 hjr; holliday junction resolvase [EC:3.1.21.10] K06915 herA; DNA double-strand break repair helicase HerA and related ATPase K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-] K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] K22585 nreA; DNA repair protein NreA
03029 Mitochondrial biogenesis [BR:tpep03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Thermococcus peptonophilus KEGG Orthology (KO) - Thermococcus peptonophilus