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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:val03030]
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 VDBG_03988 ribonuclease H
VDBG_00356 replication factor-A protein
VDBG_04775 proliferating cell nuclear antigen
VDBG_08137 DNA replication ATP-dependent helicase dna2
VDBG_03519 DNA-repair protein rad2
VDBG_08697 DNA ligase
VDBG_07009 DNA polymerase alpha catalytic subunit
VDBG_07512 DNA polymerase subunit alpha B
VDBG_03346 DNA primase small subunit
VDBG_09397 DNA primase large subunit
VDBG_00052 DNA polymerase delta catalytic subunit
VDBG_03362 DNA polymerase subunit delta-2
VDBG_05542 hypothetical protein
VDBG_03087 DNA polymerase epsilon catalytic subunit A
VDBG_00330 DNA polymerase epsilon subunit B
VDBG_04264 DNA replication licensing factor mcm2
VDBG_04326 DNA replication licensing factor mcm3
VDBG_04551 DNA replication licensing factor mcm4
VDBG_00239 DNA replication licensing factor mcm5
VDBG_08337 DNA replication licensing factor mcm6
VDBG_04696 DNA replication licensing factor mcm7
VDBG_08292 replication factor-A protein
VDBG_07525 hypothetical protein
VDBG_05409 replication factor C subunit 1
VDBG_00185 replication factor C subunit 4
VDBG_05408 replication factor C subunit 5
VDBG_05704 replication factor C subunit 3
VDBG_05572 ribonuclease H2 subunit A
VDBG_08336 hypothetical protein
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K07466 RFA1; replication factor A1
K04802 PCNA; proliferating cell nuclear antigen
K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
K02321 POLA2; DNA polymerase alpha subunit B
K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
K02685 PRI2; DNA primase large subunit
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03505 POLD4; DNA polymerase delta subunit 4
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
K10745 RNASEH2C; ribonuclease H2 subunit C
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03410 Base excision repair [PATH:val03410]
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VDBG_04724 N-glycosylase/DNA lyase
VDBG_00596 DNA base excision repair N-glycosylase
VDBG_03714 uracil-DNA glycosylase
VDBG_03380 A/G-specific adenine DNA glycosylase
VDBG_07391 G/U mismatch-specific uracil DNA glycosylase
VDBG_05893 DNA-(apurinic or apyrimidinic site) lyase
VDBG_02956 bifunctional polynucleotide phosphatase/kinase
VDBG_00887 tyrosyl-DNA phosphodiesterase
VDBG_06499 poly polymerase 2 ADP-ribosyltransferase 2
VDBG_00048 hypothetical protein
VDBG_06836 DNA polymerase gamma
VDBG_00052 DNA polymerase delta catalytic subunit
VDBG_03362 DNA polymerase subunit delta-2
VDBG_05542 hypothetical protein
VDBG_03087 DNA polymerase epsilon catalytic subunit A
VDBG_00330 DNA polymerase epsilon subunit B
VDBG_04775 proliferating cell nuclear antigen
VDBG_05409 replication factor C subunit 1
VDBG_00185 replication factor C subunit 4
VDBG_05408 replication factor C subunit 5
VDBG_05704 replication factor C subunit 3
VDBG_03519 DNA-repair protein rad2
VDBG_08697 DNA ligase
VDBG_07996 formamidopyrimidine-DNA glycosylase
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K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03505 POLD4; DNA polymerase delta subunit 4
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
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03420 Nucleotide excision repair [PATH:val03420]
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VDBG_08063 ATP-dependent DNA helicase srs2
VDBG_08639 RING-box protein
VDBG_06832 cullin-4B
VDBG_01185 DNA damage-binding protein 1b
VDBG_03487 DNA repair protein rhp42
VDBG_09296 DNA repair protein rhp41
VDBG_02577 nucleotide excision repair protein RAD23
VDBG_00552 DNA excision repair protein ERCC-8
VDBG_06908 DNA repair and recombination protein RAD26
VDBG_07406 DNA-directed RNA polymerase II subunit RPB1
VDBG_04315 DNA-directed RNA polymerase II subunit RPB2
VDBG_05130 hypothetical protein
VDBG_01082 DNA-directed RNA polymerases I
VDBG_08793 DNA-directed RNA polymerases I
VDBG_04852 DNA-directed RNA polymerase II subunit RPB7
VDBG_08235 DNA-directed RNA polymerases I
VDBG_02525 DNA-directed RNA polymerase II subunit RPB9
VDBG_03761 DNA-directed RNA polymerases I/II/III subunit 10
VDBG_01446 metallothionein-I gene transcription activator
VDBG_00138 DNA-directed RNA polymerase II
VDBG_04181 serine/threonine-protein kinase crk1
VDBG_07204 RNA polymerase II transcription factor B subunit 3
VDBG_09023 cyclin CCL1
VDBG_02832 DNA repair helicase RAD25
VDBG_03422 DNA repair helicase RAD3
VDBG_00532 RNA polymerase II transcription factor B subunit 5
VDBG_03410 RNA polymerase II transcription factor B subunit 1
VDBG_03011 suppressor of stem-loop protein
VDBG_05562 RNA polymerase II transcription factor B subunit 4
VDBG_09222 RNA polymerase II transcription factor B subunit 2
VDBG_03753 DNA-repair protein rad13
VDBG_05449 DNA repair protein rad14
VDBG_00356 replication factor-A protein
VDBG_08292 replication factor-A protein
VDBG_07525 hypothetical protein
VDBG_01757 DNA repair protein rad16
VDBG_08190 mating-type switching protein swi10
VDBG_00052 DNA polymerase delta catalytic subunit
VDBG_03362 DNA polymerase subunit delta-2
VDBG_05542 hypothetical protein
VDBG_03087 DNA polymerase epsilon catalytic subunit A
VDBG_00330 DNA polymerase epsilon subunit B
VDBG_04775 proliferating cell nuclear antigen
VDBG_05409 replication factor C subunit 1
VDBG_00185 replication factor C subunit 4
VDBG_05408 replication factor C subunit 5
VDBG_05704 replication factor C subunit 3
VDBG_08697 DNA ligase
|
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10609 CUL4; cullin 4
K10610 DDB1; DNA damage-binding protein 1
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10839 RAD23; UV excision repair protein RAD23
K10570 ERCC8; DNA excision repair protein ERCC-8
K10841 ERCC6; DNA excision repair protein ERCC-6
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K06634 CCNH; cyclin H
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10846 ERCC5; DNA excision repair protein ERCC-5
K10847 XPA; DNA-repair protein complementing XP-A cells
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10849 ERCC1; DNA excision repair protein ERCC-1
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03505 POLD4; DNA polymerase delta subunit 4
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
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03430 Mismatch repair [PATH:val03430]
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VDBG_08063 ATP-dependent DNA helicase srs2
VDBG_08287 DNA mismatch repair protein mutL
VDBG_03965 DNA mismatch repair protein msh6
VDBG_03348 DNA mismatch repair protein msh-2
VDBG_04688 DNA mismatch repair protein Msh3
VDBG_05757 DNA mismatch repair protein
VDBG_05409 replication factor C subunit 1
VDBG_00185 replication factor C subunit 4
VDBG_05408 replication factor C subunit 5
VDBG_05704 replication factor C subunit 3
VDBG_04775 proliferating cell nuclear antigen
VDBG_03253 exodeoxyribonuclease
VDBG_00356 replication factor-A protein
VDBG_08292 replication factor-A protein
VDBG_07525 hypothetical protein
VDBG_00052 DNA polymerase delta catalytic subunit
VDBG_03362 DNA polymerase subunit delta-2
VDBG_05542 hypothetical protein
VDBG_08697 DNA ligase
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K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K08734 MLH1; DNA mismatch repair protein MLH1
K08737 MSH6; DNA mismatch repair protein MSH6
K08735 MSH2; DNA mismatch repair protein MSH2
K08736 MSH3; DNA mismatch repair protein MSH3
K08739 MLH3; DNA mismatch repair protein MLH3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K04802 PCNA; proliferating cell nuclear antigen
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03505 POLD4; DNA polymerase delta subunit 4
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
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03440 Homologous recombination [PATH:val03440]
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03450 Non-homologous end-joining [PATH:val03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:val03000]
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03021 Transcription machinery [BR:val03021]
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03019 Messenger RNA biogenesis [BR:val03019]
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03041 Spliceosome [BR:val03041]
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03011 Ribosome [BR:val03011]
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03009 Ribosome biogenesis [BR:val03009]
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03016 Transfer RNA biogenesis [BR:val03016]
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03012 Translation factors [BR:val03012]
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03110 Chaperones and folding catalysts [BR:val03110]
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04131 Membrane trafficking [BR:val04131]
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04121 Ubiquitin system [BR:val04121]
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03051 Proteasome [BR:val03051]
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03032 DNA replication proteins [BR:val03032]
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VDBG_05084 origin recognition complex subunit 1
VDBG_04084 origin recognition complex subunit 2
VDBG_04645 origin recognition complex subunit
VDBG_01074 origin recognition complex subunit 4
VDBG_01521 hypothetical protein
VDBG_04858 cell division control protein
VDBG_04264 DNA replication licensing factor mcm2
VDBG_04326 DNA replication licensing factor mcm3
VDBG_04551 DNA replication licensing factor mcm4
VDBG_00239 DNA replication licensing factor mcm5
VDBG_08337 DNA replication licensing factor mcm6
VDBG_04696 DNA replication licensing factor mcm7
VDBG_09813 cell division control protein
VDBG_08168 DBF zinc finger domain-containing protein
VDBG_04832 DNA replication complex GINS protein PSF1
VDBG_01291 DNA replication complex GINS protein PSF2
VDBG_08962 DNA replication complex GINS protein PSF3
VDBG_04593 DNA replication complex GINS protein SLD5
VDBG_07731 S-M checkpoint control protein rad4
VDBG_04437 hypothetical protein
VDBG_00795 cell division control protein
VDBG_08150 DNA replication licensing factor mcm10
VDBG_07009 DNA polymerase alpha catalytic subunit
VDBG_07512 DNA polymerase subunit alpha B
VDBG_03346 DNA primase small subunit
VDBG_09397 DNA primase large subunit
VDBG_03087 DNA polymerase epsilon catalytic subunit A
VDBG_00330 DNA polymerase epsilon subunit B
VDBG_00052 DNA polymerase delta catalytic subunit
VDBG_03362 DNA polymerase subunit delta-2
VDBG_05542 hypothetical protein
VDBG_06836 DNA polymerase gamma
VDBG_00356 replication factor-A protein
VDBG_08292 replication factor-A protein
VDBG_07525 hypothetical protein
VDBG_05409 replication factor C subunit 1
VDBG_00185 replication factor C subunit 4
VDBG_05408 replication factor C subunit 5
VDBG_05704 replication factor C subunit 3
VDBG_03988 ribonuclease H
VDBG_05572 ribonuclease H2 subunit A
VDBG_08336 hypothetical protein
VDBG_04775 proliferating cell nuclear antigen
VDBG_08137 DNA replication ATP-dependent helicase dna2
VDBG_04678 DNA-binding protein SMUBP-2
VDBG_03519 DNA-repair protein rad2
VDBG_03253 exodeoxyribonuclease
VDBG_08697 DNA ligase
VDBG_07728 hypothetical protein
VDBG_01766 RIP defective
VDBG_03598 DNA methyltransferase Dim-2
VDBG_00038 hypothetical protein
VDBG_08142 NAD-dependent histone deacetylase SIR2
VDBG_00603 H/ACA ribonucleoprotein complex subunit 2
VDBG_00194 centromere/microtubule-binding protein CBF5
VDBG_05022 SMB
VDBG_05870 small nuclear ribonucleoprotein Sm D1
VDBG_07519 small nuclear ribonucleoprotein Sm D2
VDBG_06608 small nuclear ribonucleoprotein Sm D3
VDBG_00790 small nuclear ribonucleoprotein E
VDBG_01548 LSM domain-containing protein
VDBG_09899 hypothetical protein
VDBG_05694 double-strand break repair protein mus-23
VDBG_06833 ataxia telangiectasia mutated
VDBG_04764 ATP-dependent helicase SGS1
VDBG_01757 DNA repair protein rad16
VDBG_06499 poly polymerase 2 ADP-ribosyltransferase 2
VDBG_04975 G-patch domain-containing protein
VDBG_04702 hypothetical protein
VDBG_10215 DNA repair and recombination protein pif1
VDBG_01179 WD repeat-containing protein
VDBG_05183 hypothetical protein
VDBG_09649 DUF602 domain-containing protein
VDBG_01541 hypothetical protein
VDBG_04938 DNA topoisomerase
VDBG_00992 DNA topoisomerase
VDBG_08857 DNA topoisomerase
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K02603 ORC1; origin recognition complex subunit 1
K02604 ORC2; origin recognition complex subunit 2
K02605 ORC3; origin recognition complex subunit 3
K02606 ORC4; origin recognition complex subunit 4
K02608 ORC6; origin recognition complex subunit 6
K02213 CDC6; cell division control protein 6
K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
K02309 DBF4; regulatory subunit for Cdc7p protein kinase
K10732 GINS1; GINS complex subunit 1
K10733 GINS2; GINS complex subunit 2
K10734 GINS3; GINS complex subunit 3
K10735 GINS4; GINS complex subunit 4
K03507 DPB11; DNA replication regulator DPB11
K10731 SLD3; DNA replication regulator SLD3
K06628 CDC45; cell division control protein 45
K10736 MCM10; minichromosome maintenance protein 10
K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
K02321 POLA2; DNA polymerase alpha subunit B
K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
K02685 PRI2; DNA primase large subunit
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03505 POLD4; DNA polymerase delta subunit 4
K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
K10745 RNASEH2C; ribonuclease H2 subunit C
K04802 PCNA; proliferating cell nuclear antigen
K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
K19783 HCS1; DNA polymerase alpha-associated DNA helicase A [EC:5.6.2.3]
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K26118 ATAD5; ATPase family AAA domain-containing protein 5
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K11109 POT1; protection of telomeres protein 1
K11121 SIR2; NAD-dependent protein deacetylase SIR2 [EC:2.3.1.286]
K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
K11086 SNRPB; small nuclear ribonucleoprotein B and B'
K11087 SNRPD1; small nuclear ribonucleoprotein D1
K11096 SNRPD2; small nuclear ribonucleoprotein D2
K11088 SNRPD3; small nuclear ribonucleoprotein D3
K11097 SNRPE; small nuclear ribonucleoprotein E
K11098 SNRPF; small nuclear ribonucleoprotein F
K11099 SNRPG; small nuclear ribonucleoprotein G
K10865 MRE11; double-strand break repair protein MRE11
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K11135 PINX1; Pin2-interacting protein X1
K11137 TELO2; telomere length regulation protein
K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
K23314 WRAP53; telomerase Cajal body protein 1
K25059 SDE2; replication stress response regulator SDE2
K25186 RTF2; replication termination factor 2
K22485 TBF1; protein TBF1
K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
|
03036 Chromosome and associated proteins [BR:val03036]
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03400 DNA repair and recombination proteins [BR:val03400]
|
VDBG_05306 RING-2
VDBG_09973 deoxyribodipyrimidine photo-lyase
VDBG_03714 uracil-DNA glycosylase
VDBG_07391 G/U mismatch-specific uracil DNA glycosylase
VDBG_03380 A/G-specific adenine DNA glycosylase
VDBG_04724 N-glycosylase/DNA lyase
VDBG_00596 DNA base excision repair N-glycosylase
VDBG_05893 DNA-(apurinic or apyrimidinic site) lyase
VDBG_01987 DNA-(apurinic or apyrimidinic site) lyase
VDBG_00052 DNA polymerase delta catalytic subunit
VDBG_03362 DNA polymerase subunit delta-2
VDBG_05542 hypothetical protein
VDBG_03087 DNA polymerase epsilon catalytic subunit A
VDBG_00330 DNA polymerase epsilon subunit B
VDBG_04775 proliferating cell nuclear antigen
VDBG_03519 DNA-repair protein rad2
VDBG_08697 DNA ligase
VDBG_00887 tyrosyl-DNA phosphodiesterase
VDBG_00048 hypothetical protein
VDBG_02956 bifunctional polynucleotide phosphatase/kinase
VDBG_06499 poly polymerase 2 ADP-ribosyltransferase 2
VDBG_03487 DNA repair protein rhp42
VDBG_09296 DNA repair protein rhp41
VDBG_02577 nucleotide excision repair protein RAD23
VDBG_08639 RING-box protein
VDBG_06832 cullin-4B
VDBG_01185 DNA damage-binding protein 1b
VDBG_04032 DNA repair protein Rad7
VDBG_04033 DNA repair protein RAD16
VDBG_07406 DNA-directed RNA polymerase II subunit RPB1
VDBG_04315 DNA-directed RNA polymerase II subunit RPB2
VDBG_05130 hypothetical protein
VDBG_01082 DNA-directed RNA polymerases I
VDBG_08793 DNA-directed RNA polymerases I
VDBG_04852 DNA-directed RNA polymerase II subunit RPB7
VDBG_08235 DNA-directed RNA polymerases I
VDBG_02525 DNA-directed RNA polymerase II subunit RPB9
VDBG_03761 DNA-directed RNA polymerases I/II/III subunit 10
VDBG_00138 DNA-directed RNA polymerase II
VDBG_01446 metallothionein-I gene transcription activator
VDBG_00552 DNA excision repair protein ERCC-8
VDBG_06908 DNA repair and recombination protein RAD26
VDBG_00007 transcription elongation factor 1
VDBG_02832 DNA repair helicase RAD25
VDBG_03422 DNA repair helicase RAD3
VDBG_03410 RNA polymerase II transcription factor B subunit 1
VDBG_03011 suppressor of stem-loop protein
VDBG_05562 RNA polymerase II transcription factor B subunit 4
VDBG_09222 RNA polymerase II transcription factor B subunit 2
VDBG_00532 RNA polymerase II transcription factor B subunit 5
VDBG_04181 serine/threonine-protein kinase crk1
VDBG_09023 cyclin CCL1
VDBG_07204 RNA polymerase II transcription factor B subunit 3
VDBG_00356 replication factor-A protein
VDBG_08292 replication factor-A protein
VDBG_07525 hypothetical protein
VDBG_05449 DNA repair protein rad14
VDBG_08190 mating-type switching protein swi10
VDBG_01757 DNA repair protein rad16
VDBG_03753 DNA-repair protein rad13
VDBG_06119 hypothetical protein
VDBG_05035 cullin-3
VDBG_01545 hypothetical protein
VDBG_05853 hypothetical protein
VDBG_03348 DNA mismatch repair protein msh-2
VDBG_04688 DNA mismatch repair protein Msh3
VDBG_03965 DNA mismatch repair protein msh6
VDBG_08287 DNA mismatch repair protein mutL
VDBG_05757 DNA mismatch repair protein
VDBG_05409 replication factor C subunit 1
VDBG_00185 replication factor C subunit 4
VDBG_05408 replication factor C subunit 5
VDBG_05704 replication factor C subunit 3
VDBG_03253 exodeoxyribonuclease
VDBG_09806 WD repeat-containing protein
VDBG_05694 double-strand break repair protein mus-23
VDBG_04420 DNA repair protein RAD51
VDBG_05514 DNA repair protein RAD57
VDBG_00651 DNA repair and recombination protein rad22
VDBG_07456 DNA repair and recombination protein RAD54
VDBG_04764 ATP-dependent helicase SGS1
VDBG_08857 DNA topoisomerase
VDBG_03648 hypothetical protein
VDBG_01614 suppressor of Mek1
VDBG_01775 hypothetical protein
VDBG_09700 hypothetical protein
VDBG_01627 hypothetical protein
VDBG_07999 hypothetical protein
VDBG_01672 hypothetical protein
VDBG_05660 hypothetical protein
VDBG_06033 crossover junction endonuclease MUS81
VDBG_01441 hypothetical protein
VDBG_07587 GIY-YIG catalytic domain containing protein
VDBG_01491 hypothetical protein
VDBG_05319 hypothetical protein
VDBG_09683 SAP1
VDBG_07175 hypothetical protein
VDBG_05994 helicase C-terminal domain-containing protein
VDBG_08268 Ku70
VDBG_08864 Ku80
VDBG_06667 DNA ligase
VDBG_04134 ATP-dependent DNA ligase domain-containing protein
VDBG_04447 DNA polymerase lambda
VDBG_10096 artemis protein
VDBG_05594 hypothetical protein
VDBG_05898 hypothetical protein
VDBG_04702 hypothetical protein
VDBG_04014 WD repeat-containing protein
VDBG_01179 WD repeat-containing protein
VDBG_08886 WD repeat-containing protein
VDBG_01969 DNA polymerase IV
VDBG_01586 hypothetical protein
VDBG_07332 DNA polymerase kappa
VDBG_01980 DNA polymerase zeta catalytic subunit
VDBG_04353 ubiquitin-conjugating enzyme
VDBG_08325 hypothetical protein
VDBG_07737 DNA repair protein RAD5
VDBG_00923 transcription termination factor 2
VDBG_10062 ubiquitin-conjugating enzyme variant MMS2
VDBG_01677 ubiquitin-conjugating enzyme
VDBG_07427 HMG box-containing protein
VDBG_06620 hypothetical protein
VDBG_06621 hypothetical protein
VDBG_00086 checkpoint protein hus1
VDBG_03859 DNA repair exonuclease rad1
VDBG_05916 cell cycle checkpoint protein RAD17
VDBG_00233 topoisomerase 1-associated factor 1
VDBG_00428 hypothetical protein
VDBG_07018 hypothetical protein
VDBG_05210 hypothetical protein
VDBG_00152 DUF410 domain-containing protein
VDBG_01666 protein kinase rad3
VDBG_06833 ataxia telangiectasia mutated
VDBG_03742 serine/threonine-protein kinase chk1
VDBG_04584 forkhead-associated domain-containing protein kinase
VDBG_05031 M-phase inducer phosphatase
VDBG_04910 DNA damage checkpoint protein rad24
VDBG_00364 mitosis inhibitor protein kinase SWE1
VDBG_06974 FKH1
VDBG_03269 vacuolar protein sorting-associated protein
VDBG_05183 hypothetical protein
VDBG_05029 hypothetical protein
VDBG_04718 DNA cross-link repair protein pso2/snm1
VDBG_01242 hypothetical protein
VDBG_02003 nuclease S1
VDBG_04236 nuclease PA3
VDBG_00546 stretch responsive protein
VDBG_07798 cell cycle control protein cwf8
VDBG_08274 pre-mRNA-splicing factor cef-1
VDBG_05086 pre-mRNA-splicing factor prp46
VDBG_09942 nudix domain containing protein
VDBG_04772 deoxyuridine 5'-triphosphate nucleotidohydrolase
VDBG_01511 ribonucleoside-diphosphate reductase large chain
VDBG_06996 ribonucleoside-diphosphate reductase small chain
VDBG_07996 formamidopyrimidine-DNA glycosylase
VDBG_08063 ATP-dependent DNA helicase srs2
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03505 POLD4; DNA polymerase delta subunit 4
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10839 RAD23; UV excision repair protein RAD23
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10609 CUL4; cullin 4
K10610 DDB1; DNA damage-binding protein 1
K15082 RAD7; DNA repair protein RAD7
K15083 RAD16; DNA repair protein RAD16
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K10570 ERCC8; DNA excision repair protein ERCC-8
K10841 ERCC6; DNA excision repair protein ERCC-6
K25829 ELOF1; transcription elongation factor 1
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10847 XPA; DNA-repair protein complementing XP-A cells
K10849 ERCC1; DNA excision repair protein ERCC-1
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10846 ERCC5; DNA excision repair protein ERCC-5
K15075 MET18; DNA repair/transcription protein MET18/MMS19
K03869 CUL3; cullin 3
K03872 ELOC; elongin-C
K15077 ELA1; elongin-A
K08735 MSH2; DNA mismatch repair protein MSH2
K08736 MSH3; DNA mismatch repair protein MSH3
K08737 MSH6; DNA mismatch repair protein MSH6
K08734 MLH1; DNA mismatch repair protein MLH1
K08739 MLH3; DNA mismatch repair protein MLH3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K24755 WDR76; WD repeat-containing protein 76
K10865 MRE11; double-strand break repair protein MRE11
K04482 RAD51; DNA repair protein RAD51
K10958 RAD57; DNA repair protein RAD57
K10873 RAD52; DNA repair and recombination protein RAD52
K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K15364 NCE4; RecQ-mediated genome instability protein 1
K17491 SMEK; protein phosphatase 4 regulatory subunit 3
K22803 SMC5; structural maintenance of chromosomes protein 5
K22804 SMC6; structural maintenance of chromosomes protein 6
K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
K22825 NSMCE4; non-structural maintenance of chromosomes element 4
K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
K10881 SHFM1; 26 proteasome complex subunit DSS1
K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
K11339 MORF4L1; mortality factor 4-like protein 1
K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
K15360 STRA13; centromere protein X
K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
K11137 TELO2; telomere length regulation protein
K15361 WDR48; WD repeat-containing protein 48
K23314 WRAP53; telomerase Cajal body protein 1
K24752 WDR70; WD repeat-containing protein 70
K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
K26957 GCNA; germ cell nuclear acidic protein
K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
K10903 HUS1; HUS1 checkpoint protein
K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
K06662 HRAD17; cell cycle checkpoint protein
K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
K11272 MRC1; mediator of replication checkpoint protein 1
K20403 TTI1; TELO2-interacting protein 1
K23388 UBL4; ubiquitin-like protein 4
K23387 GET4; golgi to ER traffic protein 4
K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
K06630 YWHAE; 14-3-3 protein epsilon
K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
K24664 FKH; forkhead protein FKH
K12196 VPS4; vacuolar protein-sorting-associated protein 4
K25059 SDE2; replication stress response regulator SDE2
K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
K15340 DCLRE1A; DNA cross-link repair 1A protein
K17815 EXO5; exonuclease V [EC:3.1.-.-]
K05986 NUCS; nuclease S1 [EC:3.1.30.1]
K05986 NUCS; nuclease S1 [EC:3.1.30.1]
K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
K12862 PLRG1; pleiotropic regulator 1
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
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03029 Mitochondrial biogenesis [BR:val03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Verticillium alfalfae