CMP-KDO biosynthesis
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Entry
T30020_M00063
Name
CMP-KDO biosynthesis
Definition
K01627
K03270
K00979
Type
Pathway module
Organism
MetaHIT sample from healthy Danish male
Reaction
R03254
C01112
->
C04478
R03350
C04478
->
C01187
R03351
C01187
->
C04121
Reference module (KO)
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Escherichia coli K-12 MG1655
Escherichia coli K-12 W3110
Escherichia coli K-12 DH10B
Escherichia coli K-12 MC4100(MuLac) BW2952
Escherichia coli K-12 MDS42
Escherichia coli O157:H7 EDL933 (EHEC)
Escherichia coli O157:H7 Sakai (EHEC)
Escherichia coli O157:H7 EC4115 (EHEC)
Escherichia coli O157:H7 TW14359 (EHEC)
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Escherichia coli O26:H11 11368 (EHEC)
Escherichia coli O111:H- 11128 (EHEC)
Escherichia coli O103:H2 12009 (EHEC)
Escherichia coli O127:H6 E2348/69 (EPEC)
Escherichia coli O55:H7 CB9615 (EPEC)
Escherichia coli O55:H7 RM12579 (EPEC)
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Escherichia coli O6:K15:H31 536 (UPEC)
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Escherichia coli O1:K1:H7 (APEC)
Escherichia coli O9 HS (commensal)
Escherichia coli O139:H28 E24377A (ETEC)
Escherichia coli SMS-3-5 (environmental)
Escherichia coli O152:H28 SE11 (commensal)
Escherichia coli O8 IAI1 (commensal)
Escherichia coli O81 ED1a (commensal)
Escherichia coli 55989 (EAEC)
Escherichia coli O7:K1 IAI39 (ExPEC)
Escherichia coli O7:K1 CE10
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Escherichia coli O45:K1:H7 S88 (ExPEC)
Escherichia coli O44:H18 042
Escherichia coli O83:H1 NRG 857C
Escherichia coli O78:H11:K80 H10407 (ETEC)
Escherichia coli O150:H5 SE15 (commensal)
Escherichia coli O104:H4 2009EL-2071
Escherichia coli O104:H4 2009EL-2050
Escherichia coli O104:H4 2011C-3493
Escherichia coli C ATCC 8739
Escherichia coli B REL606
Escherichia coli BL21-Gold(DE3)pLysS AG
Escherichia coli KO11FL
Escherichia coli KO11FL
Escherichia coli ABU 83972
Escherichia coli DH1
Escherichia coli DH1
Escherichia coli IHE3034
Escherichia coli NA114
Escherichia coli UM146
Escherichia coli UMNK88
Escherichia coli W
Escherichia coli W
Escherichia coli clone D i14
Escherichia coli clone D i2
Escherichia coli P12b
Escherichia coli BL21(DE3)
Escherichia coli BL21(DE3)
Escherichia coli LF82
Escherichia coli APEC O78
Escherichia fergusonii
Escherichia blattae DSM 4481
Salmonella enterica subsp. enterica serovar Typhi CT18
Salmonella enterica subsp. enterica serovar Typhi Ty2
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Salmonella enterica subsp. enterica serovar Typhimurium 14028S
Salmonella enterica subsp. enterica serovar Typhimurium D23580
Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Salmonella enterica subsp. enterica serovar Typhimurium UK-1
Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Salmonella enterica subsp. enterica serovar Typhimurium 798
Salmonella enterica subsp. enterica serovar Typhimurium U288
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
Salmonella enterica subsp. enterica serovar Paratyphi B
Salmonella enterica subsp. enterica serovar Paratyphi C
Salmonella enterica subsp. enterica serovar Choleraesuis
Salmonella enterica subsp. enterica serovar Heidelberg SL476
Salmonella enterica subsp. enterica serovar Heidelberg B182
Salmonella enterica subsp. enterica serovar Newport
Salmonella enterica subsp. enterica serovar Schwarzengrund
Salmonella enterica subsp. enterica serovar Agona
Salmonella enterica subsp. enterica serovar Dublin
Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Salmonella enterica subsp. enterica serovar Enteritidis
Salmonella enterica subsp. enterica serovar Javiana
Salmonella enterica subsp. arizonae
Salmonella bongori
Yersinia pestis CO92 (biovar Orientalis)
Yersinia pestis KIM 10 (biovar Mediaevalis)
Yersinia pestis Antiqua (biovar Antiqua)
Yersinia pestis Nepal516 (biovar Antiqua)
Yersinia pestis 91001 (biovar Microtus)
Yersinia pestis Pestoides F
Yersinia pestis Angola
Yersinia pestis Z176003
Yersinia pestis A1122
Yersinia pestis D106004
Yersinia pestis D182038
Yersinia pestis biovar Medievalis Harbin 35
Yersinia pseudotuberculosis IP32953 (serotype I)
Yersinia pseudotuberculosis IP31758 (serotype O:1b)
Yersinia pseudotuberculosis YPIII
Yersinia pseudotuberculosis PB1/+
Yersinia enterocolitica subsp. enterocolitica 8081
Yersinia enterocolitica subsp. palearctica 105.5R(r)
Yersinia enterocolitica subsp. palearctica Y11
Shigella flexneri 301 (serotype 2a)
Shigella flexneri 2457T (serotype 2a)
Shigella flexneri 8401 (serotype 5b)
Shigella flexneri 2002017 (serotype Fxv)
Shigella sonnei Ss046
Shigella sonnei 53G
Shigella boydii Sb227
Shigella boydii CDC 3083-94
Shigella dysenteriae
Pectobacterium atrosepticum
Pectobacterium carotovorum subsp. carotovorum PC1
Pectobacterium carotovorum subsp. carotovorum PCC21
Pectobacterium wasabiae
Pectobacterium sp. SCC3193
Erwinia tasmaniensis
Erwinia pyrifoliae Ep1/96
Erwinia pyrifoliae DSM 12163
Erwinia amylovora CFBP1430
Erwinia amylovora ATCC 49946
Erwinia billingiae
Erwinia sp. Ejp617
Photorhabdus luminescens
Photorhabdus asymbiotica
Sodalis glossinidius
Enterobacter sp. 638
Enterobacter cloacae subsp. cloacae ATCC 13047
Enterobacter cloacae subsp. cloacae ENHKU01
Enterobacter cloacae SCF1
Enterobacter cloacae EcWSU1
Enterobacter cloacae subsp. dissolvens SDM
Enterobacter asburiae
Enterobacter aerogenes KCTC 2190
Enterobacter aerogenes EA1509E
Cronobacter sakazakii ATCC BAA-894
Cronobacter sakazakii ES15
Cronobacter sakazakii Sp291
Cronobacter turicensis
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Klebsiella pneumoniae NTUH-K2044
Klebsiella pneumoniae subsp. pneumoniae HS11286
Klebsiella pneumoniae subsp. pneumoniae 1084
Klebsiella pneumoniae 342
Klebsiella pneumoniae KCTC 2242
Klebsiella variicola
Klebsiella oxytoca KCTC 1686
Citrobacter koseri ATCC BAA-895
Citrobacter rodentium
Serratia proteamaculans
Serratia plymuthica AS9
Serratia sp. AS12
Serratia sp. AS13
Serratia marcescens FGI94
Serratia marcescens WW4
Proteus mirabilis
Edwardsiella ictaluri
Edwardsiella tarda EIB202
Edwardsiella tarda FL6-60
Edwardsiella tarda C07-087
Candidatus Hamiltonella defensa
Dickeya dadantii Ech703
Dickeya dadantii Ech586
Dickeya dadantii 3937
Dickeya zeae
Xenorhabdus bovienii
Xenorhabdus nematophila
Pantoea ananatis LMG 20103
Pantoea ananatis LMG 5342
Pantoea ananatis AJ13355
Pantoea ananatis PA13
Pantoea vagans
Pantoea sp. At-9b
Rahnella sp. Y9602
Rahnella aquatilis CIP 78.65 = ATCC 33071
Rahnella aquatilis HX2
Providencia stuartii
Morganella morganii
Raoultella ornithinolytica
Secondary endosymbiont of Heteropsylla cubana
Enterobacteriaceae bacterium FGI 57
Haemophilus influenzae Rd KW20 (serotype d)
Haemophilus influenzae 86-028NP (nontypeable)
Haemophilus influenzae PittEE (nontypeable)
Haemophilus influenzae PittGG (nontypeable)
Haemophilus influenzae F3031 (nontypeable)
Haemophilus influenzae F3047 (nontypeable)
Haemophilus influenzae 10810 (serotype b)
Haemophilus influenzae R2846 (nontypeable)
Haemophilus influenzae R2866 (nontypeable)
Haemophilus ducreyi
Haemophilus parasuis
Haemophilus parainfluenzae
Haemophilus somnus 129PT
Haemophilus somnus 2336
Pasteurella multocida subsp. multocida Pm70
Pasteurella multocida subsp. multocida HN06
Pasteurella multocida subsp. multocida 3480
Pasteurella multocida 36950
Mannheimia succiniciproducens
Mannheimia haemolytica USDA-ARS-SAM-185
Mannheimia haemolytica USDA-ARS-USMARC-183
Mannheimia haemolytica M42548
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Actinobacillus pleuropneumoniae AP76 (serotype 7)
Actinobacillus succinogenes
Actinobacillus suis
Aggregatibacter aphrophilus
Aggregatibacter actinomycetemcomitans D11S-1
Aggregatibacter actinomycetemcomitans ANH9381
Aggregatibacter actinomycetemcomitans D7S-1
Gallibacterium anatis
Bibersteinia trehalosi
Xylella fastidiosa 9a5c
Xylella fastidiosa Temecula1
Xylella fastidiosa M12
Xylella fastidiosa M23
Xylella fastidiosa subsp. fastidiosa GB514
Xanthomonas campestris pv. campestris ATCC 33913
Xanthomonas campestris pv. campestris 8004
Xanthomonas campestris pv. campestris B100
Xanthomonas campestris pv. vesicatoria
Xanthomonas campestris pv. raphani
Xanthomonas axonopodis pv. citri 306
Xanthomonas axonopodis pv. citrumelo F1
Xanthomonas axonopodis Xac29-1
Xanthomonas oryzae pv. oryzae KACC10331
Xanthomonas oryzae pv. oryzae MAFF311018
Xanthomonas oryzae pv. oryzae PXO99A
Xanthomonas oryzae pv. oryzicola
Xanthomonas albilineans
Xanthomonas citri
Stenotrophomonas maltophilia K279a
Stenotrophomonas maltophilia R551-3
Stenotrophomonas maltophilia JV3
Stenotrophomonas maltophilia D457
Pseudoxanthomonas suwonensis
Pseudoxanthomonas spadix
Frateuria aurantia
Rhodanobacter sp. 2APBS1
Vibrio cholerae O1 biovar El Tor N16961
Vibrio cholerae O1 2010EL-1786
Vibrio cholerae MJ-1236
Vibrio cholerae O395
Vibrio cholerae O395
Vibrio cholerae M66-2
Vibrio cholerae IEC224
Vibrio cholerae LMA3984-4
Vibrio vulnificus CMCP6
Vibrio vulnificus YJ016
Vibrio vulnificus MO6-24/O
Vibrio splendidus
Vibrio furnissii
Vibrio fischeri ES114
Vibrio fischeri MJ11
Aliivibrio salmonicida LFI1238
Photobacterium profundum
Vibrio anguillarum
Pseudomonas aeruginosa PAO1
Pseudomonas aeruginosa UCBPP-PA14
Pseudomonas aeruginosa PA7
Pseudomonas aeruginosa LESB58
Pseudomonas aeruginosa M18
Pseudomonas aeruginosa NCGM2.S1
Pseudomonas aeruginosa DK2
Pseudomonas aeruginosa B136-33
Pseudomonas putida KT2440
Pseudomonas putida F1
Pseudomonas putida GB-1
Pseudomonas putida W619
Pseudomonas putida S16
Pseudomonas putida BIRD-1
Pseudomonas putida ND6
Pseudomonas putida DOT-T1E
Pseudomonas putida HB3267
Pseudomonas putida UW4
Pseudomonas syringae pv. tomato DC3000
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. phaseolicola 1448A
Pseudomonas protegens Pf-5
Pseudomonas fluorescens Pf0-1
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens F113
Pseudomonas fluorescens A506
Pseudomonas poae
Pseudomonas entomophila
Pseudomonas mendocina ymp
Pseudomonas mendocina NK-01
Pseudomonas stutzeri A1501
Pseudomonas stutzeri ATCC 17588
Pseudomonas stutzeri DSM 4166
Pseudomonas stutzeri CCUG 29243
Pseudomonas stutzeri DSM 10701
Pseudomonas stutzeri RCH2
Pseudomonas brassicacearum
Pseudomonas fulva
Pseudomonas denitrificans
Cellvibrio japonicus
Azotobacter vinelandii DJ
Azotobacter vinelandii CA
Azotobacter vinelandii CA6
Psychrobacter arcticus
Psychrobacter cryohalolentis
Psychrobacter sp. PRwf-1
Acinetobacter sp. ADP1
Acinetobacter oleivorans
Acinetobacter baumannii ATCC 17978
Acinetobacter baumannii SDF
Acinetobacter baumannii AYE
Acinetobacter baumannii ACICU
Acinetobacter baumannii AB0057
Acinetobacter baumannii AB307-0294
Acinetobacter baumannii 1656-2
Acinetobacter baumannii MDR-ZJ06
Acinetobacter baumannii MDR-TJ
Acinetobacter baumannii TCDC-AB0715
Acinetobacter baumannii TYTH-1
Acinetobacter baumannii D1279779
Acinetobacter calcoaceticus
Moraxella catarrhalis
Shewanella oneidensis
Shewanella denitrificans
Shewanella frigidimarina
Shewanella amazonensis
Shewanella baltica OS155
Shewanella baltica OS185
Shewanella baltica OS195
Shewanella baltica OS223
Shewanella baltica OS678
Shewanella baltica OS117
Shewanella baltica BA175
Shewanella loihica
Shewanella putrefaciens CN-32
Shewanella putrefaciens 200
Shewanella sediminis
Shewanella pealeana
Shewanella sp. MR-4
Shewanella sp. MR-7
Shewanella sp. ANA-3
Shewanella sp. W3-18-1
Shewanella halifaxensis
Shewanella woodyi ATCC 51908
Shewanella piezotolerans WP3
Shewanella violacea
Idiomarina loihiensis
Colwellia psychrerythraea
Pseudoalteromonas haloplanktis
Pseudoalteromonas atlantica
Pseudoalteromonas sp. SM9913
Saccharophagus degradans
Marinobacter aquaeolei
Marinobacter hydrocarbonoclasticus
Marinobacter adhaerens
Marinobacter sp. BSs20148
Alteromonas macleodii Deep ecotype
Alteromonas macleodii ATCC 27126
Alteromonas macleodii Balearic Sea AD45
Alteromonas macleodii English Channel 673
Alteromonas macleodii Black Sea 11
Alteromonas macleodii AltDE1
Alteromonas sp. SN2
Glaciecola sp. 4H-3-7+YE-5
Glaciecola nitratireducens
Glaciecola psychrophila
Psychromonas ingrahamii
Psychromonas sp. CNPT3
Teredinibacter turnerae
Ferrimonas balearica
Coxiella burnetii RSA 493
Coxiella burnetii RSA 331
Coxiella burnetii Dugway 5J108-111
Coxiella burnetii CbuG_Q212
Coxiella burnetii CbuK_Q154
Legionella pneumophila subsp. pneumophila Philadelphia 1
Legionella pneumophila subsp. pneumophila Philadelphia 1
Legionella pneumophila Lens
Legionella pneumophila Paris
Legionella pneumophila Corby
Legionella pneumophila 2300/99 Alcoy
Legionella pneumophila subsp. pneumophila ATCC 43290
Legionella longbeachae
Methylococcus capsulatus
Methylomonas methanica
Methylomicrobium alcaliphilum
Francisella tularensis subsp. tularensis SCHU S4
Francisella tularensis subsp. tularensis FSC 198
Francisella tularensis subsp. tularensis WY96-3418
Francisella tularensis subsp. tularensis NE061598
Francisella tularensis subsp. tularensis TI0902
Francisella tularensis TIGB03
Francisella tularensis subsp. holarctica LVS
Francisella tularensis subsp. holarctica OSU18
Francisella tularensis subsp. holarctica FTNF002-00
Francisella tularensis subsp. holarctica F92
Francisella tularensis subsp. holarctica FSC200
Francisella tularensis subsp. mediasiatica FSC147
Francisella novicida U112
Francisella cf. novicida Fx1
Francisella cf. novicida 3523
Francisella philomiragia
Francisella sp. TX077308
Francisella noatunensis
Thiomicrospira crunogena
Thioalkalimicrobium cyclicum
Methylophaga sp. JAM1
Methylophaga sp. JAM7
Cycloclasticus sp. P1
Nitrosococcus oceani
Nitrosococcus halophilus
Nitrosococcus watsonii
Allochromatium vinosum
Thiocystis violascens
Thioflavicoccus mobilis
Alkalilimnicola ehrlichei
Halorhodospira halophila
Thioalkalivibrio sp. HL-EbGR7
Thioalkalivibrio sp. K90mix
Thioalkalivibrio nitratireducens
Halothiobacillus neapolitanus
Hahella chejuensis
Chromohalobacter salexigens
Halomonas elongata
Alcanivorax borkumensis
Alcanivorax dieselolei
Kangiella koreensis
Marinomonas sp. MWYL1
Marinomonas mediterranea
Marinomonas posidonica
Thalassolituus oleivorans
Aeromonas hydrophila
Aeromonas salmonicida
Aeromonas veronii
Tolumonas auensis
Oceanimonas sp. GK1
Acidithiobacillus ferrooxidans ATCC 53993
Acidithiobacillus ferrooxidans ATCC 23270
Acidithiobacillus caldus
Acidithiobacillus ferrivorans
Simiduia agarivorans
Candidatus Ruthia magnifica
Candidatus Vesicomyosocius okutanii
Neisseria meningitidis Z2491 (serogroup A)
Neisseria meningitidis MC58 (serogroup B)
Neisseria meningitidis alpha710 (serogroup B)
Neisseria meningitidis H44/76 (serogroup B)
Neisseria meningitidis FAM18 (serogroup C)
Neisseria meningitidis 053442 (serogroup C)
Neisseria meningitidis 8013 (serogroup C)
Neisseria meningitidis alpha14 (cnl strain)
Neisseria meningitidis G2136 (serogroup B)
Neisseria meningitidis M01-240149 (serogroup B)
Neisseria meningitidis M01-240355 (serogroup B)
Neisseria meningitidis M04-240196 (serogroup B)
Neisseria meningitidis WUE 2594 (serogroup A)
Neisseria meningitidis NZ-05/33 (serogroup B)
Neisseria gonorrhoeae FA 1090
Neisseria gonorrhoeae NCCP11945
Neisseria gonorrhoeae TCDC-NG08107
Neisseria lactamica
Chromobacterium violaceum
Laribacter hongkongensis
Pseudogulbenkiania sp. NH8B
Ralstonia solanacearum GMI1000
Ralstonia solanacearum CFBP2957
Ralstonia solanacearum PSI07
Ralstonia solanacearum Po82
Ralstonia pickettii 12J
Ralstonia pickettii 12D
Burkholderia mallei ATCC 23344
Burkholderia mallei SAVP1
Burkholderia mallei NCTC 10229
Burkholderia mallei NCTC 10247
Burkholderia pseudomallei K96243
Burkholderia pseudomallei 1710b
Burkholderia pseudomallei 1106a
Burkholderia pseudomallei 668
Burkholderia pseudomallei MSHR346
Burkholderia pseudomallei 1026b
Burkholderia pseudomallei BPC006
Burkholderia thailandensis E264
Burkholderia vietnamiensis
Burkholderia sp. 383
Burkholderia cenocepacia AU1054
Burkholderia cenocepacia HI2424
Burkholderia cenocepacia MC0-3
Burkholderia cenocepacia J2315
Burkholderia ambifaria AMMD
Burkholderia ambifaria MC40-6
Burkholderia multivorans ATCC 17616 (JGI)
Burkholderia multivorans ATCC 17616 (Tohoku)
Burkholderia cepacia
Burkholderia xenovorans
Burkholderia phymatum
Burkholderia phytofirmans
Burkholderia glumae
Burkholderia sp. CCGE1001
Burkholderia sp. CCGE1002
Burkholderia sp. CCGE1003
Burkholderia rhizoxinica
Burkholderia gladioli
Burkholderia sp. YI23
Burkholderia sp. KJ006
Burkholderia phenoliruptrix
Polynucleobacter sp. QLW-P1DMWA-1
Polynucleobacter necessarius
Bordetella pertussis Tohama I
Bordetella pertussis CS
Bordetella pertussis 18323
Bordetella parapertussis 12822
Bordetella parapertussis Bpp5
Bordetella bronchiseptica RB50
Bordetella bronchiseptica MO149
Bordetella bronchiseptica 253
Bordetella petrii
Bordetella avium
Achromobacter xylosoxidans
Taylorella equigenitalis MCE9
Taylorella equigenitalis ATCC 35865
Taylorella equigenitalis 14/56
Taylorella asinigenitalis MCE3
Taylorella asinigenitalis 14/45
Pusillimonas sp. T7-7
Advenella kashmirensis
Rhodoferax ferrireducens
Polaromonas sp. JS666
Polaromonas naphthalenivorans
Acidovorax avenae
Acidovorax sp. JS42
Acidovorax ebreus
Acidovorax avenae subsp. avenae ATCC 19860
Acidovorax sp. KKS102
Verminephrobacter eiseniae
Delftia acidovorans
Delftia sp. Cs1-4
Variovorax paradoxus S110
Variovorax paradoxus EPS
Comamonas testosteroni
Alicycliphilus denitrificans BC
Alicycliphilus denitrificans K601
Methylibium petroleiphilum
Herminiimonas arsenicoxydans
Minibacterium massiliensis
Herbaspirillum seropedicae
Collimonas fungivorans
Leptothrix cholodnii
Thiomonas intermedia
Thiomonas sp. 3As
Rubrivivax gelatinosus
Aromatoleum aromaticum EbN1
Azoarcus sp. BH72
Azoarcus sp. KH32C
Dechloromonas aromatica
Dechlorosoma suillum
Thiobacillus denitrificans
Methylobacillus flagellatus
Methylotenera mobilis
Methylotenera versatilis
Methylovorus glucosetrophus SIP3-4
Methylovorus sp. MP688
Accumulibacter phosphatis
Sideroxydans lithotrophicus
Gallionella capsiferriformans
Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis)
Candidatus Kinetoplastibacterium blastocrithidii TCC012E
Candidatus Kinetoplastibacterium galatii
Beta proteobacterium CB
Helicobacter pylori 26695
Helicobacter pylori 26695
Helicobacter pylori J99
Helicobacter pylori HPAG1
Helicobacter pylori Shi470
Helicobacter pylori Shi112
Helicobacter pylori Shi169
Helicobacter pylori Shi417
Helicobacter pylori G27
Helicobacter pylori P12
Helicobacter pylori B38
Helicobacter pylori B8
Helicobacter pylori PeCan4
Helicobacter pylori PeCan18
Helicobacter pylori SJM180
Helicobacter pylori ELS37
Helicobacter pylori 35A
Helicobacter pylori 908
Helicobacter pylori 2017
Helicobacter pylori 2018
Helicobacter pylori Cuz20
Helicobacter pylori F16
Helicobacter pylori F30
Helicobacter pylori F32
Helicobacter pylori F57
Helicobacter pylori Sat464
Helicobacter pylori 52
Helicobacter pylori v225d
Helicobacter pylori 83
Helicobacter pylori SNT49
Helicobacter pylori Lithuania75
Helicobacter pylori Gambia94/24
Helicobacter pylori India7
Helicobacter pylori Puno120
Helicobacter pylori Puno135
Helicobacter pylori SouthAfrica7
Helicobacter pylori HUP-B14
Helicobacter pylori 51
Helicobacter pylori XZ274
Helicobacter pylori Rif1
Helicobacter pylori Rif2
Helicobacter pylori Aklavik117
Helicobacter pylori Aklavik86
Helicobacter pylori OK113
Helicobacter pylori OK310
Helicobacter hepaticus
Helicobacter acinonychis
Helicobacter mustelae
Helicobacter felis
Helicobacter bizzozeronii
Helicobacter cetorum MIT 00-7128
Helicobacter cetorum MIT 99-5656
Helicobacter cinaedi PAGU611
Helicobacter cinaedi ATCC BAA-847
Wolinella succinogenes
Sulfurimonas denitrificans
Sulfurimonas autotrophica
Sulfuricurvum kujiense
Uncultured Sulfuricurvum sp. RIFRC-1
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Campylobacter jejuni subsp. jejuni NCTC 11168-BN148
Campylobacter jejuni subsp. jejuni 81-176
Campylobacter jejuni subsp. jejuni 81116
Campylobacter jejuni subsp. jejuni ICDCCJ07001
Campylobacter jejuni subsp. jejuni IA3902
Campylobacter jejuni subsp. jejuni M1
Campylobacter jejuni subsp. jejuni S3
Campylobacter jejuni subsp. jejuni PT14
Campylobacter jejuni RM1221
Campylobacter jejuni subsp. doylei 269.97
Campylobacter fetus
Campylobacter curvus
Campylobacter hominis ATCC BAA-381
Campylobacter concisus 13826
Campylobacter lari
Arcobacter butzleri RM4018
Arcobacter butzleri ED-1
Arcobacter nitrofigilis
Arcobacter sp. L
Sulfurospirillum deleyianum
Sulfurospirillum barnesii
Nitratifractor salsuginis
Nitratiruptor sp. SB155-2
Sulfurovum sp. NBC37-1
Nautilia profundicola
Geobacter sulfurreducens PCA
Geobacter sulfurreducens KN400
Geobacter metallireducens
Geobacter uraniireducens
Geobacter lovleyi
Geobacter bemidjiensis
Geobacter sp. FRC-32
Geobacter sp. M21
Geobacter sp. M18
Pelobacter carbinolicus
Pelobacter propionicus
Desulfovibrio vulgaris Hildenborough
Desulfovibrio vulgaris DP4
Desulfovibrio vulgaris Miyazaki F
Desulfovibrio vulgaris RCH1
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans ND132
Desulfovibrio salexigens
Desulfovibrio aespoeensis
Desulfovibrio africanus
Desulfovibrio hydrothermalis
Desulfovibrio piezophilus
Lawsonia intracellularis PHE/MN1-00
Lawsonia intracellularis N343
Desulfomicrobium baculatum
Desulfohalobium retbaense
Bdellovibrio bacteriovorus HD100
Bdellovibrio bacteriovorus Tiberius
Bdellovibrio exovorus
Bacteriovorax marinus SJ
Desulfotalea psychrophila
Desulfurivibrio alkaliphilus
Desulfobulbus propionicus
Desulfocapsa sulfexigens
Candidatus Desulfococcus oleovorans
Desulfatibacillum alkenivorans
Desulfobacterium autotrophicum
Desulfobacula toluolica
Anaeromyxobacter dehalogenans 2CP-C
Anaeromyxobacter dehalogenans 2CP-1
Anaeromyxobacter sp. K
Myxococcus xanthus
Myxococcus fulvus
Myxococcus stipitatus
Corallococcus coralloides
Stigmatella aurantiaca
Haliangium ochraceum
Syntrophus aciditrophicus
Desulfobacca acetoxidans DSM 11109
Syntrophobacter fumaroxidans
Desulfarculus baarsii
Hippea maritima
Rhodopseudomonas palustris BisA53
Magnetococcus marinus MC-1
Desulfurispirillum indicum
Paenibacillus mucilaginosus KNP414
Thermodesulfobium narugense
Halothermothrix orenii
Halanaerobium hydrogeniformans
Halanaerobium praevalens
Acetohalobium arabaticum
Halobacteroides halobius
Veillonella parvula
Selenomonas sputigena
Selenomonas ruminantium
Megasphaera elsdenii
Megamonas hypermegale
Acidaminococcus fermentans
Acidaminococcus intestini
Parachlamydia acanthamoebae
Brachyspira hyodysenteriae
Brachyspira murdochii
Brachyspira pilosicoli 95/1000
Brachyspira pilosicoli B2904
Brachyspira pilosicoli P43/6/78
Brachyspira pilosicoli WesB
Brachyspira intermedia
Candidatus Koribacter versatilis
Acidobacterium capsulatum
Granulicella tundricola
Granulicella mallensis
Terriglobus saanensis
Terriglobus roseus
Candidatus Solibacter usitatus
Candidatus Chloracidobacterium thermophilum B
Bacteroides thetaiotaomicron
Bacteroides fragilis YCH46
Bacteroides fragilis NCTC9343
Bacteroides fragilis 638R
Bacteroides vulgatus
Bacteroides helcogenes
Bacteroides xylanisolvens
Porphyromonas gingivalis W83
Porphyromonas gingivalis ATCC 33277
Porphyromonas gingivalis TDC60
Parabacteroides distasonis
Odoribacter splanchnicus
Tannerella forsythia
Prevotella ruminicola
Prevotella melaninogenica
Prevotella denticola
Prevotella intermedia
Prevotella dentalis
Alistipes finegoldii
Alistipes shahii
Chitinophaga pinensis
Niastella koreensis
Pedobacter heparinus
Pedobacter saltans
Sphingobacterium sp. 21
Solitalea canadensis
Haliscomenobacter hydrossis
Saprospira grandis
Cyclobacterium marinum
Belliella baltica
Echinicola vietnamensis
Cytophaga hutchinsonii
Dyadobacter fermentans
Spirosoma linguale
Leadbetterella byssophila
Runella slithyformis
Flexibacter litoralis
Emticicia oligotrophica
Fibrella aestuarina
Gramella forsetii
Flavobacterium johnsoniae
Flavobacterium psychrophilum
Flavobacterium branchiophilum
Flavobacterium columnare
Flavobacterium indicum
Capnocytophaga ochracea
Capnocytophaga canimorsus
Robiginitalea biformata
Zunongwangia profunda
Riemerella anatipestifer ATCC 11845 = DSM 15868
Riemerella anatipestifer ATCC 11845 = DSM 15868
Riemerella anatipestifer RA-GD
Riemerella anatipestifer RA-CH-1
Riemerella anatipestifer RA-CH-2
Cellulophaga algicola
Cellulophaga lytica
Weeksella virosa
Krokinobacter sp. 4H-3-7-5
Lacinutrix sp. 5H-3-7-4
Zobellia galactanivorans
Muricauda ruestringensis
Ornithobacterium rhinotracheale
Psychroflexus torquis
Nonlabens dokdonensis
Polaribacter sp. MED152
Flavobacteriaceae bacterium
Owenweeksia hongkongensis
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Leptotrichia buccalis
Sebaldella termitidis
Ilyobacter polytropus
Opitutus terrae
Gemmatimonas aurantiaca
Rhodopirellula baltica
Pirellula staleyi
Isosphaera pallida
Singulisphaera acidiphila
Phycisphaera mikurensis
Elusimicrobium minutum
Thermanaerovibrio acidaminovorans
Aminobacterium colombiense
Thermovirga lienii
Anaerobaculum mobile
Synechococcus sp. WH8102
Synechococcus elongatus PCC6301
Synechococcus elongatus PCC7942
Synechococcus sp. CC9605
Synechococcus sp. CC9902
Synechococcus sp. RCC307
Synechococcus sp. WH7803
Cyanothece sp. PCC 7425
Acaryochloris marina
Gloeocapsa sp. PCC 7428
Calothrix sp. PCC 7507
Prochlorococcus marinus MIT 9313
Prochlorococcus marinus MIT 9303
Pseudanabaena sp. PCC 7367
Chroococcidiopsis thermalis
Chlorobaculum tepidum
Chlorobaculum parvum NCIB 8327
Chlorobium chlorochromatii
Chlorobium phaeobacteroides DSM 266
Chlorobium phaeobacteroides BS1
Chlorobium limicola
Chlorobium phaeovibrioides
Pelodictyon luteolum
Pelodictyon phaeoclathratiforme
Prosthecochloris aestuarii
Chloroherpeton thalassium
Ignavibacterium album
Aquifex aeolicus
Hydrogenobaculum sp. Y04AAS1
Hydrogenobaculum sp. HO
Hydrogenobaculum sp. SN
Hydrogenobacter thermophilus
Hydrogenobacter thermophilus
Thermocrinis albus
Sulfurihydrogenibium sp. YO3AOP1
Sulfurihydrogenibium azorense
Persephonella marina
Thermovibrio ammonificans
Desulfurobacterium thermolithotrophum
Candidatus Nitrospira defluvii
Leptospirillum ferrooxidans
Leptospirillum ferriphilum
Deferribacter desulfuricans SSM1
Denitrovibrio acetiphilus
Calditerrivibrio nitroreducens
Flexistipes sinusarabici
Thermodesulfatator indicus
Thermodesulfobacterium sp. OPB45
Candidatus Methylomirabilis oxyfera
CMP-KDO biosynthesis
CMP-KDO biosynthesis
