Betaine biosynthesis, choline => betaine
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Entry
T30050_M00555
Name
Betaine biosynthesis, choline => betaine
Definition
(
K00108
,
K11440
)
K00130
Type
Pathway module
Organism
MetaHIT sample from healthy Danish male
Reaction
R01025
,
R08557
,
R08558
C00114
->
C00576
R02565
,
R02566
C00576
->
C00719
Reference module (KO)
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Magnaporthe oryzae
Fusarium graminearum
Sclerotinia sclerotiorum
Botryotinia fuckeliana
Aspergillus nidulans
Neosartorya fischeri
Aspergillus fumigatus
Aspergillus oryzae
Aspergillus niger
Aspergillus flavus
Aspergillus clavatus
Penicillium chrysogenum
Phaeosphaeria nodorum
Escherichia coli K-12 MG1655
Escherichia coli K-12 W3110
Escherichia coli K-12 DH10B
Escherichia coli O157:H7 EDL933 (EHEC)
Escherichia coli O157:H7 Sakai (EHEC)
Escherichia coli O157:H7 EC4115 (EHEC)
Escherichia coli O157:H7 TW14359 (EHEC)
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Escherichia coli O26:H11 11368 (EHEC)
Escherichia coli O111:H- 11128 (EHEC)
Escherichia coli O103:H2 12009 (EHEC)
Escherichia coli O127:H6 E2348/69 (EPEC)
Escherichia coli O55:H7 CB9615 (EPEC)
Escherichia coli O55:H7 RM12579 (EPEC)
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Escherichia coli O6:K15:H31 536 (UPEC)
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Escherichia coli O1:K1:H7 (APEC)
Escherichia coli O9 HS (commensal)
Escherichia coli O139:H28 E24377A (ETEC)
Escherichia coli SMS-3-5 (environmental)
Escherichia coli O152:H28 SE11 (commensal)
Escherichia coli O8 IAI1 (commensal)
Escherichia coli 55989 (EAEC)
Escherichia coli O7:K1 IAI39 (ExPEC)
Escherichia coli O7:K1 CE10
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Escherichia coli O45:K1:H7 S88 (ExPEC)
Escherichia coli O44:H18 042
Escherichia coli O83:H1 NRG 857C
Escherichia coli O78:H11:K80 H10407 (ETEC)
Escherichia coli O104:H4 2009EL-2071
Escherichia coli O104:H4 2009EL-2050
Escherichia coli O104:H4 2011C-3493
Escherichia coli C ATCC 8739
Escherichia coli B REL606
Escherichia coli BL21-Gold(DE3)pLysS AG
Escherichia coli KO11FL
Escherichia coli KO11FL
Escherichia coli ABU 83972
Escherichia coli DH1
Escherichia coli DH1
Escherichia coli IHE3034
Escherichia coli NA114
Escherichia coli UM146
Escherichia coli UMNK88
Escherichia coli W
Escherichia coli W
Escherichia coli clone D i14
Escherichia coli clone D i2
Escherichia coli P12b
Escherichia coli BL21(DE3)
Yersinia pestis CO92 (biovar Orientalis)
Yersinia pestis Antiqua (biovar Antiqua)
Yersinia pestis Nepal516 (biovar Antiqua)
Yersinia pestis 91001 (biovar Microtus)
Yersinia pestis Pestoides F
Yersinia pestis Z176003
Yersinia pestis A1122
Yersinia pestis D106004
Yersinia pestis D182038
Yersinia pseudotuberculosis IP32953 (serotype I)
Yersinia pseudotuberculosis IP31758 (serotype O:1b)
Yersinia pseudotuberculosis YPIII
Yersinia pseudotuberculosis PB1/+
Shigella flexneri 8401 (serotype 5b)
Shigella sonnei 53G
Pectobacterium atrosepticum
Pectobacterium carotovorum subsp. carotovorum PC1
Pectobacterium carotovorum subsp. carotovorum PCC21
Erwinia tasmaniensis
Erwinia pyrifoliae Ep1/96
Erwinia pyrifoliae DSM 12163
Erwinia amylovora CFBP1430
Erwinia amylovora ATCC 49946
Erwinia billingiae
Erwinia sp. Ejp617
Enterobacter cloacae subsp. cloacae ATCC 13047
Enterobacter cloacae subsp. cloacae ENHKU01
Enterobacter cloacae EcWSU1
Enterobacter cloacae subsp. dissolvens SDM
Enterobacter aerogenes KCTC 2190
Cronobacter sakazakii ATCC BAA-894
Cronobacter sakazakii ES15
Cronobacter turicensis
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Klebsiella pneumoniae NTUH-K2044
Klebsiella pneumoniae subsp. pneumoniae HS11286
Klebsiella pneumoniae subsp. pneumoniae 1084
Klebsiella pneumoniae 342
Klebsiella pneumoniae KCTC 2242
Klebsiella variicola
Klebsiella oxytoca KCTC 1686
Citrobacter koseri ATCC BAA-895
Serratia proteamaculans
Serratia plymuthica AS9
Serratia sp. AS12
Serratia sp. AS13
Proteus mirabilis
Xenorhabdus bovienii
Xenorhabdus nematophila
Pantoea ananatis LMG 20103
Pantoea ananatis LMG 5342
Pantoea ananatis AJ13355
Pantoea ananatis PA13
Pantoea vagans
Pantoea sp. At-9b
Rahnella sp. Y9602
Rahnella aquatilis CIP 78.65 = ATCC 33071
Rahnella aquatilis HX2
Providencia stuartii
Xanthomonas campestris pv. campestris ATCC 33913
Xanthomonas campestris pv. campestris 8004
Xanthomonas campestris pv. campestris B100
Xanthomonas campestris pv. vesicatoria
Xanthomonas campestris pv. raphani
Xanthomonas axonopodis pv. citri 306
Xanthomonas axonopodis pv. citrumelo F1
Stenotrophomonas maltophilia K279a
Stenotrophomonas maltophilia R551-3
Stenotrophomonas maltophilia JV3
Stenotrophomonas maltophilia D457
Vibrio vulnificus CMCP6
Vibrio vulnificus YJ016
Vibrio vulnificus MO6-24/O
Vibrio parahaemolyticus RIMD 2210633
Vibrio harveyi
Vibrio splendidus
Vibrio sp. Ex25
Vibrio sp. EJY3
Vibrio furnissii
Photobacterium profundum
Vibrio anguillarum
Pseudomonas aeruginosa PAO1
Pseudomonas aeruginosa UCBPP-PA14
Pseudomonas aeruginosa PA7
Pseudomonas aeruginosa LESB58
Pseudomonas aeruginosa M18
Pseudomonas aeruginosa NCGM2.S1
Pseudomonas aeruginosa DK2
Pseudomonas putida KT2440
Pseudomonas putida F1
Pseudomonas putida GB-1
Pseudomonas putida W619
Pseudomonas putida S16
Pseudomonas putida BIRD-1
Pseudomonas syringae pv. tomato DC3000
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. phaseolicola 1448A
Pseudomonas protegens Pf-5
Pseudomonas fluorescens Pf0-1
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens F113
Pseudomonas fluorescens A506
Pseudomonas entomophila
Pseudomonas mendocina ymp
Pseudomonas mendocina NK-01
Pseudomonas stutzeri A1501
Pseudomonas stutzeri ATCC 17588
Pseudomonas stutzeri DSM 4166
Pseudomonas stutzeri CCUG 29243
Pseudomonas brassicacearum
Pseudomonas fulva
Psychrobacter arcticus
Psychrobacter cryohalolentis
Acinetobacter sp. ADP1
Acinetobacter oleivorans
Acinetobacter baumannii ATCC 17978
Acinetobacter baumannii SDF
Acinetobacter baumannii AYE
Acinetobacter baumannii ACICU
Acinetobacter baumannii AB0057
Acinetobacter baumannii AB307-0294
Acinetobacter baumannii 1656-2
Acinetobacter baumannii MDR-ZJ06
Acinetobacter baumannii MDR-TJ
Acinetobacter baumannii TCDC-AB0715
Acinetobacter calcoaceticus
Shewanella denitrificans
Shewanella frigidimarina
Shewanella baltica OS155
Shewanella baltica OS185
Shewanella baltica OS195
Shewanella baltica OS223
Shewanella baltica OS678
Shewanella baltica OS117
Shewanella baltica BA175
Shewanella sediminis
Shewanella pealeana
Shewanella halifaxensis
Shewanella woodyi ATCC 51908
Shewanella piezotolerans WP3
Shewanella violacea
Colwellia psychrerythraea
Pseudoalteromonas haloplanktis
Pseudoalteromonas atlantica
Pseudoalteromonas sp. SM9913
Marinobacter aquaeolei
Marinobacter adhaerens
Alteromonas sp. SN2
Glaciecola sp. 4H-3-7+YE-5
Psychromonas ingrahamii
Hahella chejuensis
Chromohalobacter salexigens
Halomonas elongata
Marinomonas sp. MWYL1
Marinomonas mediterranea
Marinomonas posidonica
Oceanimonas sp. GK1
Pseudogulbenkiania sp. NH8B
Ralstonia solanacearum GMI1000
Ralstonia eutropha JMP134
Ralstonia eutropha H16
Cupriavidus taiwanensis
Cupriavidus necator
Burkholderia mallei ATCC 23344
Burkholderia mallei SAVP1
Burkholderia mallei NCTC 10229
Burkholderia mallei NCTC 10247
Burkholderia pseudomallei K96243
Burkholderia pseudomallei 1710b
Burkholderia pseudomallei 1106a
Burkholderia pseudomallei 668
Burkholderia pseudomallei 1026b
Burkholderia thailandensis E264
Burkholderia vietnamiensis
Burkholderia sp. 383
Burkholderia cenocepacia AU1054
Burkholderia cenocepacia HI2424
Burkholderia cenocepacia MC0-3
Burkholderia cenocepacia J2315
Burkholderia ambifaria AMMD
Burkholderia ambifaria MC40-6
Burkholderia multivorans ATCC 17616 (JGI)
Burkholderia multivorans ATCC 17616 (Tohoku)
Burkholderia xenovorans
Burkholderia phymatum
Burkholderia phytofirmans
Burkholderia glumae
Burkholderia sp. CCGE1001
Burkholderia sp. CCGE1002
Burkholderia sp. CCGE1003
Burkholderia gladioli
Burkholderia sp. YI23
Burkholderia sp. KJ006
Rhodoferax ferrireducens
Polaromonas sp. JS666
Verminephrobacter eiseniae
Delftia sp. Cs1-4
Variovorax paradoxus S110
Collimonas fungivorans
Methylotenera versatilis
Desulfomicrobium baculatum
Desulfohalobium retbaense
Candidatus Pelagibacter ubique
Mesorhizobium loti
Mesorhizobium ciceri
Mesorhizobium opportunistum
Sinorhizobium meliloti 1021
Sinorhizobium meliloti AK83
Sinorhizobium meliloti BL225C
Sinorhizobium meliloti SM11
Sinorhizobium medicae
Sinorhizobium fredii NGR234
Sinorhizobium fredii HH103
Agrobacterium tumefaciens C58
Agrobacterium radiobacter K84
Agrobacterium vitis S4
Agrobacterium sp. H13-3
Rhizobium etli CFN 42
Rhizobium etli CIAT 652
Rhizobium leguminosarum bv. viciae 3841
Rhizobium leguminosarum bv. trifolii WSM2304
Rhizobium leguminosarum bv. trifolii WSM1325
Brucella melitensis bv. 1 16M
Brucella melitensis ATCC 23457
Brucella melitensis biovar Abortus
Brucella abortus S19
Brucella suis 1330
Brucella suis 1330
Brucella suis ATCC 23445
Brucella suis VBI22
Brucella ovis
Brucella canis ATCC 23365
Brucella canis HSK A52141
Brucella microti
Brucella pinnipedialis
Ochrobactrum anthropi
Azorhizobium caulinodans
Starkeya novella
Methylobacterium nodulans
Pelagibacterium halotolerans
Ruegeria pomeroyi
Ruegeria sp. TM1040
Rhodobacter sphaeroides 2.4.1
Rhodobacter sphaeroides ATCC 17029
Rhodobacter sphaeroides ATCC 17025
Rhodobacter sphaeroides KD131
Rhodobacter capsulatus
Jannaschia sp. CCS1
Roseobacter denitrificans
Roseobacter litoralis Och 149
Paracoccus denitrificans
Pseudovibrio sp. FO-BEG1
Hyphomonas neptunium
Novosphingobium aromaticivorans
Granulibacter bethesdensis
Acidiphilium cryptum JF-5
Acidiphilium multivorum
Azospirillum sp. B510
Candidatus Puniceispirillum marinum
Polymorphum gilvum
Bacillus subtilis subsp. subtilis 168
Bacillus subtilis subsp. subtilis RO-NN-1
Bacillus subtilis subsp. subtilis BSP1
Bacillus subtilis subsp. spizizenii W23
Bacillus subtilis subsp. spizizenii TU-B-10
Bacillus subtilis BSn5
Bacillus subtilis QB928
Bacillus subtilis BEST7613
Bacillus licheniformis ATCC 14580
Bacillus licheniformis DSM13
Bacillus amyloliquefaciens DSM 7
Bacillus amyloliquefaciens FZB42
Bacillus amyloliquefaciens subsp. plantarum CAU B946
Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2
Bacillus amyloliquefaciens subsp. plantarum AS43.3
Bacillus amyloliquefaciens TA208
Bacillus amyloliquefaciens LL3
Bacillus amyloliquefaciens XH7
Bacillus amyloliquefaciens Y2
Bacillus atrophaeus
Bacillus cytotoxicus NVH 391-98
Bacillus clausii
Bacillus pumilus
Bacillus megaterium QM B1551
Bacillus megaterium DSM 319
Bacillus megaterium WSH-002
Bacillus selenitireducens
Bacillus sp. JS
Staphylococcus aureus subsp. aureus N315 (MRSA/VSSA)
Staphylococcus aureus subsp. aureus Mu50 (MRSA/VISA)
Staphylococcus aureus subsp. aureus Mu3 (MRSA/hetero-VISA)
Staphylococcus aureus subsp. aureus JH1 (MRSA/VSSA)
Staphylococcus aureus subsp. aureus JH9 (MRSA/VRSA)
Staphylococcus aureus subsp. aureus MW2 (CA-MRSA)
Staphylococcus aureus subsp. aureus MSSA476 (MSSA)
Staphylococcus aureus subsp. aureus MRSA252 (MRSA)
Staphylococcus aureus subsp. aureus COL (MRSA)
Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MSSA)
Staphylococcus aureus subsp. aureus USA300_FPR3757 (CA-MRSA)
Staphylococcus aureus subsp. aureus NCTC8325
Staphylococcus aureus subsp. aureus Newman
Staphylococcus aureus subsp. aureus M013 (CA-MRSA)
Staphylococcus aureus subsp. aureus VC40
Staphylococcus aureus subsp. aureus MSHR1132
Staphylococcus aureus subsp. aureus ED133
Staphylococcus aureus subsp. aureus JKD6159
Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA)
Staphylococcus aureus subsp. aureus ECT-R 2
Staphylococcus aureus subsp. aureus T0131 (MRSA)
Staphylococcus aureus subsp. aureus TCH60
Staphylococcus aureus subsp. aureus 11819-97 (CA-MRSA)
Staphylococcus aureus subsp. aureus 71193
Staphylococcus aureus subsp. aureus HO 5096 0412
Staphylococcus aureus subsp. aureus TW20 (MRSA)
Staphylococcus aureus subsp. aureus ST398 (MRSA)
Staphylococcus aureus RF122
Staphylococcus aureus 04-02981
Staphylococcus aureus 08BA02176
Staphylococcus epidermidis ATCC 12228
Staphylococcus epidermidis RP62A
Staphylococcus haemolyticus
Staphylococcus saprophyticus
Staphylococcus carnosus
Staphylococcus lugdunensis HKU09-01
Staphylococcus lugdunensis N920143
Staphylococcus pseudintermedius HKU10-03
Staphylococcus pseudintermedius ED99
Halobacillus halophilus
Tetragenococcus halophilus
Mycobacterium avium 104
Mycobacterium smegmatis MC2 155
Mycobacterium vanbaalenii
Mycobacterium gilvum PYR-GCK
Mycobacterium sp. MCS
Mycobacterium sp. KMS
Mycobacterium sp. JLS
Mycobacterium marinum M
Amycolicicoccus subflavus
Corynebacterium diphtheriae NCTC 13129
Corynebacterium diphtheriae 241
Corynebacterium diphtheriae INCA 402
Corynebacterium diphtheriae HC01
Corynebacterium diphtheriae HC02
Corynebacterium diphtheriae HC03
Corynebacterium diphtheriae HC04
Corynebacterium diphtheriae BH8
Corynebacterium diphtheriae C7
Corynebacterium diphtheriae CDCE 8392
Corynebacterium diphtheriae PW8
Corynebacterium diphtheriae VA01
Corynebacterium jeikeium
Corynebacterium urealyticum DSM 7109
Corynebacterium aurimucosum
Corynebacterium kroppenstedtii
Corynebacterium pseudotuberculosis FRC41
Corynebacterium pseudotuberculosis 1002
Corynebacterium pseudotuberculosis I19
Corynebacterium pseudotuberculosis PAT10
Corynebacterium ulcerans BR-AD22
Corynebacterium ulcerans 809
Corynebacterium ulcerans 0102
Rhodococcus jostii RHA1
Streptomyces coelicolor
Streptomyces avermitilis
Streptomyces scabiei
Arthrobacter sp. FB24
Arthrobacter aurescens
Microlunatus phosphovorus
Nocardioides sp. JS614
Thermomonospora curvata
Streptosporangium roseum
Geodermatophilus obscurus
Kineococcus radiotolerans
Saccharopolyspora erythraea
Saccharomonospora viridis
Amycolatopsis mediterranei U32
Amycolatopsis mediterranei S699
Amycolatopsis mediterranei S699
Salinispora tropica
Salinispora arenicola
Stackebrandtia nassauensis
Conexibacter woesei
Cyclobacterium marinum
Flexistipes sinusarabici
Betaine biosynthesis, choline => betaine
Betaine biosynthesis, choline => betaine
