RNA degradosome
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Entry
eco_M00394
Name
RNA degradosome
Definition
K08300
+
K03732
+
K01689
+
K00962
Type
Structural complex
Organism
Escherichia coli K-12 MG1655
Pathway
eco03018
Comment
PNPase trimer : RNase E tetramer : enolase dimer : helicase=4:3:8:8
Reference module (KO)
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Escherichia coli K-12 MG1655
Escherichia coli K-12 W3110
Escherichia coli K-12 DH10B
Escherichia coli K-12 MC4100(MuLac) BW2952
Escherichia coli K-12 MDS42
Escherichia coli O157:H7 EDL933 (EHEC)
Escherichia coli O157:H7 Sakai (EHEC)
Escherichia coli O157:H7 EC4115 (EHEC)
Escherichia coli O157:H7 TW14359 (EHEC)
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Escherichia coli O26:H11 11368 (EHEC)
Escherichia coli O111:H- 11128 (EHEC)
Escherichia coli O103:H2 12009 (EHEC)
Escherichia coli O127:H6 E2348/69 (EPEC)
Escherichia coli O55:H7 CB9615 (EPEC)
Escherichia coli O55:H7 RM12579 (EPEC)
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Escherichia coli O6:K15:H31 536 (UPEC)
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Escherichia coli APEC O1 (APEC)
Escherichia coli O9 HS (commensal)
Escherichia coli E24377A (ETEC)
Escherichia coli SMS-3-5 (environmental)
Escherichia coli O152:H28 SE11 (commensal)
Escherichia coli O8 IAI1 (commensal)
Escherichia coli O81 ED1a (commensal)
Escherichia coli 55989 (EAEC)
Escherichia coli O7:K1 IAI39 (ExPEC)
Escherichia coli O7:K1 CE10
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Escherichia coli O45:K1:H7 S88 (ExPEC)
Escherichia coli O44:H18 042 (EAEC)
Escherichia coli O83:H1 NRG 857C
Escherichia coli O78:H11:K80 H10407 (ETEC)
Escherichia coli O150:H5 SE15 (commensal)
Escherichia coli O104:H4 2009EL-2071
Escherichia coli O104:H4 2009EL-2050
Escherichia coli O104:H4 2011C-3493
Escherichia coli ATCC 8739
Escherichia coli B REL606
Escherichia coli BL21-Gold(DE3)pLysS AG
Escherichia coli KO11FL
Escherichia coli KO11FL
Escherichia coli ABU 83972
Escherichia coli DH1
Escherichia coli DH1
Escherichia coli IHE3034
Escherichia coli NA114
Escherichia coli UM146
Escherichia coli UMNK88
Escherichia coli W
Escherichia coli W
Escherichia coli clone D i14
Escherichia coli clone D i2
Escherichia coli P12b
Escherichia coli BL21(DE3)
Escherichia coli BL21(DE3)
Escherichia coli LF82
Escherichia coli APEC O78
Escherichia coli LY180
Escherichia coli PMV-1
Escherichia coli JJ1886
Escherichia coli O145:H28 RM13514 (EHEC)
Escherichia fergusonii
Salmonella enterica subsp. enterica serovar Typhi CT18
Salmonella enterica subsp. enterica serovar Typhi Ty2
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Salmonella enterica subsp. enterica serovar Typhimurium 14028S
Salmonella enterica subsp. enterica serovar Typhimurium D23580
Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Salmonella enterica subsp. enterica serovar Typhimurium UK-1
Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Salmonella enterica subsp. enterica serovar Typhimurium 798
Salmonella enterica subsp. enterica serovar Typhimurium U288
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Salmonella enterica subsp. enterica serovar Typhimurium 08-1736
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Salmonella enterica subsp. enterica serovar Typhimurium DT104
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
Salmonella enterica subsp. enterica serovar Paratyphi B
Salmonella enterica subsp. enterica serovar Paratyphi C
Salmonella enterica subsp. enterica serovar Choleraesuis
Salmonella enterica subsp. enterica serovar Heidelberg SL476
Salmonella enterica subsp. enterica serovar Heidelberg B182
Salmonella enterica subsp. enterica Serovar Heidelberg CFSAN002069
Salmonella enterica subsp. enterica serovar Heidelberg 41578
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Salmonella enterica subsp. enterica serovar Schwarzengrund
Salmonella enterica subsp. enterica serovar Agona 24249
Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
Salmonella enterica subsp. enterica serovar Enteritidis
Salmonella enterica subsp. enterica serovar Javiana
Salmonella enterica subsp. enterica Serovar Cubana
Salmonella enterica subsp. enterica serovar Bareilly
Salmonella enterica subsp. enterica serovar Bovismorbificans
Salmonella enterica subsp. enterica serovar Thompson
Salmonella enterica subsp. arizonae
Salmonella bongori NCTC 12419
Salmonella bongori N268-08
Yersinia pestis CO92 (biovar Orientalis)
Yersinia pestis KIM10+ (biovar Mediaevalis)
Yersinia pestis Antiqua (biovar Antiqua)
Yersinia pestis Nepal516 (biovar Antiqua)
Yersinia pestis 91001 (biovar Microtus)
Yersinia pestis Pestoides F
Yersinia pestis Angola
Yersinia pestis Z176003
Yersinia pestis A1122
Yersinia pestis D106004
Yersinia pestis D182038
Yersinia pestis biovar Medievalis Harbin 35
Yersinia pseudotuberculosis IP32953 (serotype I)
Yersinia pseudotuberculosis IP31758 (serotype O:1b)
Yersinia pseudotuberculosis YPIII
Yersinia pseudotuberculosis PB1/+
Yersinia enterocolitica subsp. enterocolitica 8081
Yersinia enterocolitica subsp. palearctica 105.5R(r)
Yersinia enterocolitica subsp. palearctica Y11
Yersinia similis
Shigella flexneri 301 (serotype 2a)
Shigella flexneri 2457T (serotype 2a)
Shigella flexneri 8401 (serotype 5b)
Shigella flexneri 2002017 (serotype Fxv)
Shigella sonnei Ss046
Shigella sonnei 53G
Shigella boydii Sb227
Shigella boydii CDC 3083-94
Shigella dysenteriae Sd197
Shigella dysenteriae 1617
Pectobacterium atrosepticum
Pectobacterium carotovorum subsp. carotovorum PC1
Pectobacterium carotovorum subsp. carotovorum PCC21
Pectobacterium wasabiae
Pectobacterium sp. SCC3193
Erwinia tasmaniensis
Erwinia pyrifoliae Ep1/96
Erwinia pyrifoliae DSM 12163
Erwinia amylovora CFBP1430
Erwinia amylovora ATCC 49946
Erwinia billingiae
Erwinia sp. Ejp617
Photorhabdus luminescens
Photorhabdus asymbiotica
Sodalis glossinidius (Glossina spp.)
Sodalis sp. HS1
Enterobacter sp. 638
Enterobacter cloacae subsp. cloacae ATCC 13047
Enterobacter cloacae subsp. cloacae ENHKU01
Enterobacter cloacae EcWSU1
Enterobacter cloacae subsp. dissolvens SDM
Enterobacter lignolyticus
Enterobacter asburiae LF7a
Enterobacter asburiae L1
Enterobacter aerogenes KCTC 2190
Enterobacter aerogenes EA1509E
Enterobacter sp. R4-368
Cronobacter sakazakii ATCC BAA-894
Cronobacter sakazakii ES15
Cronobacter sakazakii Sp291
Cronobacter sakazakii CMCC 45402
Cronobacter turicensis
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Klebsiella pneumoniae NTUH-K2044
Klebsiella pneumoniae subsp. pneumoniae HS11286
Klebsiella pneumoniae subsp. pneumoniae 1084
Klebsiella pneumoniae 342
Klebsiella pneumoniae KCTC 2242
Klebsiella pneumoniae
Klebsiella pneumoniae JM45
Klebsiella pneumoniae CG43
Klebsiella variicola
Klebsiella oxytoca KCTC 1686
Klebsiella oxytoca E718
Citrobacter koseri
Citrobacter rodentium
Citrobacter freundii
Serratia proteamaculans
Serratia plymuthica AS9
Serratia plymuthica 4Rx13
Serratia plymuthica S13
Serratia sp. AS12
Serratia sp. AS13
Serratia marcescens FGI94
Serratia marcescens WW4
Serratia liquefaciens
Serratia sp. ATCC 39006
Serratia fonticola
Proteus mirabilis HI4320
Proteus mirabilis BB2000
Edwardsiella ictaluri
Edwardsiella tarda EIB202
Edwardsiella tarda FL6-60
Edwardsiella piscicida C07-087
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Dickeya dadantii Ech703
Dickeya dadantii Ech586
Dickeya dadantii 3937
Dickeya zeae
Xenorhabdus bovienii
Xenorhabdus nematophila
Pantoea ananatis LMG 20103
Pantoea ananatis LMG 5342
Pantoea ananatis AJ13355
Pantoea ananatis PA13
Pantoea vagans
Pantoea sp. At-9b
Rahnella sp. Y9602
Rahnella aquatilis CIP 78.65 = ATCC 33071
Rahnella aquatilis HX2
Providencia stuartii
Shimwellia blattae
Morganella morganii
Raoultella ornithinolytica
Enterobacteriaceae bacterium FGI 57
Plautia stali symbiont
Haemophilus influenzae Rd KW20 (serotype d)
Haemophilus influenzae 86-028NP (nontypeable)
Haemophilus influenzae PittEE (nontypeable)
Haemophilus influenzae PittGG (nontypeable)
Haemophilus influenzae F3031 (nontypeable)
Haemophilus influenzae F3047 (nontypeable)
Haemophilus influenzae 10810 (serotype b)
Haemophilus influenzae R2846 (nontypeable)
Haemophilus influenzae R2866 (nontypeable)
Haemophilus influenzae KR494 (serotype f)
Haemophilus parasuis SH0165
Haemophilus parasuis ZJ0906
Haemophilus parainfluenzae
Haemophilus somnus 129PT
Haemophilus somnus 2336
Pasteurella multocida subsp. multocida Pm70
Pasteurella multocida subsp. multocida HN06
Pasteurella multocida subsp. multocida 3480
Pasteurella multocida 36950
Mannheimia succiniciproducens
Mannheimia haemolytica USDA-ARS-SAM-185
Mannheimia haemolytica USDA-ARS-USMARC-183
Mannheimia haemolytica M42548
Mannheimia haemolytica D153
Mannheimia haemolytica D171
Mannheimia haemolytica D174
Mannheimia haemolytica USMARC_2286
Mannheimia varigena USDA-ARS-USMARC-1261
Mannheimia varigena USDA-ARS-USMARC-1296
Mannheimia varigena USDA-ARS-USMARC-1312
Mannheimia varigena USDA-ARS-USMARC-1388
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Actinobacillus pleuropneumoniae AP76 (serotype 7)
Actinobacillus succinogenes
Actinobacillus suis
Aggregatibacter aphrophilus
Aggregatibacter actinomycetemcomitans D11S-1
Aggregatibacter actinomycetemcomitans ANH9381
Aggregatibacter actinomycetemcomitans D7S-1
Gallibacterium anatis
Bibersteinia trehalosi USDA-ARS-USMARC-192
Bibersteinia trehalosi USDA-ARS-USMARC-188
Bibersteinia trehalosi USDA-ARS-USMARC-189
Bibersteinia trehalosi USDA-ARS-USMARC-190
Xylella fastidiosa 9a5c
Xylella fastidiosa Temecula1
Xylella fastidiosa M12
Xylella fastidiosa M23
Xylella fastidiosa subsp. fastidiosa GB514
Xanthomonas campestris pv. campestris ATCC 33913
Xanthomonas campestris pv. campestris 8004
Xanthomonas campestris pv. campestris B100
Xanthomonas campestris pv. raphani
Xanthomonas campestris pv. vesicatoria
Xanthomonas citri pv. citri 306
Xanthomonas citri subsp. citri Aw12879
Xanthomonas alfalfae
Xanthomonas axonopodis Xac29-1
Xanthomonas oryzae pv. oryzae KACC 10331
Xanthomonas oryzae pv. oryzae MAFF311018
Xanthomonas oryzae pv. oryzae PXO99A
Xanthomonas oryzae pv. oryzicola
Xanthomonas albilineans
Xanthomonas fuscans
Stenotrophomonas maltophilia K279a
Stenotrophomonas maltophilia R551-3
Stenotrophomonas maltophilia JV3
Stenotrophomonas maltophilia D457
Pseudoxanthomonas suwonensis
Pseudoxanthomonas spadix
Frateuria aurantia
Rhodanobacter denitrificans
Dyella jiangningensis
Vibrio cholerae O1 biovar El Tor N16961
Vibrio cholerae O1 2010EL-1786
Vibrio cholerae MJ-1236
Vibrio cholerae O395
Vibrio cholerae O395
Vibrio cholerae M66-2
Vibrio cholerae IEC224
Vibrio vulnificus CMCP6
Vibrio vulnificus YJ016
Vibrio vulnificus MO6-24/O
Vibrio parahaemolyticus RIMD 2210633
Vibrio parahaemolyticus BB22OP
Vibrio parahaemolyticus O1:K33 CDC_K4557
Vibrio parahaemolyticus O1:Kuk FDA_R31
Vibrio parahaemolyticus UCM-V493
Vibrio campbellii
Vibrio campbellii
Vibrio alginolyticus
Vibrio splendidus
Vibrio sp. Ex25
Vibrio sp. EJY3
Vibrio furnissii
Vibrio nigripulchritudo
Vibrio anguillarum 775
Vibrio anguillarum M3
Aliivibrio fischeri ES114
Aiivibrio fischeri MJ11
Aliivibrio salmonicida
Photobacterium profundum
Pseudomonas aeruginosa PAO1
Pseudomonas aeruginosa PAO1-VE13
Pseudomonas aeruginosa UCBPP-PA14
Pseudomonas aeruginosa PA7
Pseudomonas aeruginosa LESB58
Pseudomonas aeruginosa M18
Pseudomonas aeruginosa NCGM2.S1
Pseudomonas aeruginosa DK2
Pseudomonas aeruginosa B136-33
Pseudomonas aeruginosa RP73
Pseudomonas aeruginosa PA1
Pseudomonas aeruginosa PA1R
Pseudomonas aeruginosa MTB-1
Pseudomonas aeruginosa LES431
Pseudomonas aeruginosa SCV20265
Pseudomonas aeruginosa PA38182
Pseudomonas aeruginosa YL84
Pseudomonas aeruginosa c7447m
Pseudomonas putida KT2440
Pseudomonas putida F1
Pseudomonas putida GB-1
Pseudomonas putida W619
Pseudomonas putida S16
Pseudomonas putida BIRD-1
Pseudomonas putida ND6
Pseudomonas putida DOT-T1E
Pseudomonas putida HB3267
Pseudomonas putida H8234
Pseudomonas putida NBRC 14164
Pseudomonas sp. UW4
Pseudomonas syringae pv. tomato DC3000
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae CC1557
Pseudomonas syringae pv. phaseolicola 1448A
Pseudomonas cichorii
Pseudomonas protegens CHA0
Pseudomonas fluorescens Pf0-1
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens F113
Pseudomonas fluorescens A506
Pseudomonas poae
Pseudomonas entomophila
Pseudomonas mendocina ymp
Pseudomonas mendocina NK-01
Pseudomonas stutzeri A1501
Pseudomonas stutzeri ATCC 17588
Pseudomonas stutzeri DSM 4166
Pseudomonas stutzeri CCUG 29243
Pseudomonas stutzeri DSM 10701
Pseudomonas stutzeri RCH2
Pseudomonas brassicacearum
Pseudomonas fulva
Pseudomonas denitrificans
Pseudomonas resinovorans
Pseudomonas sp. VLB120
Pseudomonas sp. TKP
Pseudomonas monteilii SB3078
Pseudomonas monteilii SB3101
Pseudomonas knackmussii
Cellvibrio japonicus
Azotobacter vinelandii DJ
Azotobacter vinelandii CA
Azotobacter vinelandii CA6
Psychrobacter arcticus
Psychrobacter cryohalolentis
Psychrobacter sp. PRwf-1
Psychrobacter sp. G
Acinetobacter sp. ADP1
Acinetobacter oleivorans
Acinetobacter baumannii ATCC 17978
Acinetobacter baumannii SDF
Acinetobacter baumannii AYE
Acinetobacter baumannii ACICU
Acinetobacter baumannii AB0057
Acinetobacter baumannii AB307-0294
Acinetobacter baumannii 1656-2
Acinetobacter baumannii MDR-ZJ06
Acinetobacter baumannii MDR-TJ
Acinetobacter baumannii TCDC-AB0715
Acinetobacter baumannii TYTH-1
Acinetobacter baumannii D1279779
Acinetobacter baumannii BJAB07104
Acinetobacter baumannii BJAB0715
Acinetobacter baumannii BJAB0868
Acinetobacter baumannii ZW85-1
Acinetobacter calcoaceticus
Moraxella catarrhalis
Shewanella oneidensis
Shewanella denitrificans
Shewanella frigidimarina
Shewanella amazonensis
Shewanella baltica OS155
Shewanella baltica OS185
Shewanella baltica OS195
Shewanella baltica OS223
Shewanella baltica OS678
Shewanella baltica OS117
Shewanella baltica BA175
Shewanella loihica
Shewanella putrefaciens CN-32
Shewanella putrefaciens 200
Shewanella sediminis
Shewanella pealeana
Shewanella sp. MR-4
Shewanella sp. MR-7
Shewanella sp. ANA-3
Shewanella sp. W3-18-1
Shewanella halifaxensis
Shewanella woodyi
Shewanella piezotolerans
Shewanella violacea
Idiomarina loihiensis L2TR
Idiomarina loihiensis GSL 199
Colwellia psychrerythraea
Pseudoalteromonas haloplanktis
Pseudoalteromonas atlantica
Pseudoalteromonas sp. SM9913
Saccharophagus degradans
Marinobacter hydrocarbonoclasticus VT8
Marinobacter hydrocarbonoclasticus ATCC 49840
Marinobacter adhaerens
Marinobacter sp. BSs20148
Alteromonas macleodii Balearic Sea AD45
Alteromonas macleodii English Channel 673
Alteromonas macleodii English Channel 615
Alteromonas macleodii Black Sea 11
Alteromonas macleodii AltDE1
Alteromonas macleodii Ionian Sea U4
Alteromonas macleodii Ionian Sea U7
Alteromonas macleodii Ionian Sea U8
Alteromonas macleodii Ionian Sea UM4b
Alteromonas macleodii Ionian Sea UM7
Alteromonas macleodii Aegean Sea MED64
Alteromonas sp. SN2
Glaciecola sp. 4H-3-7+YE-5
Glaciecola nitratireducens
Glaciecola psychrophila
Psychromonas ingrahamii
Psychromonas sp. CNPT3
Teredinibacter turnerae
Ferrimonas balearica
Methylomonas methanica
Methylomicrobium alcaliphilum
Methylophaga nitratireducenticrescens
Methylophaga frappieri
Cycloclasticus sp. P1
Cycloclasticus zancles
Nitrosococcus oceani
Nitrosococcus halophilus
Nitrosococcus watsonii
Allochromatium vinosum
Thiocystis violascens
Thioflavicoccus mobilis
Alkalilimnicola ehrlichii
Halorhodospira halophila
Halorhodospira halochloris
Thioalkalivibrio sulfidiphilus
Thioalkalivibrio sp. K90mix
Thioalkalivibrio nitratireducens
Spiribacter salinus
Spiribacter sp. UAH-SP71
Hahella chejuensis
Halomonas elongata
Alcanivorax borkumensis
Alcanivorax dieselolei
Kangiella koreensis
Marinomonas sp. MWYL1
Marinomonas mediterranea
Marinomonas posidonica
Thalassolituus oleivorans MIL-1
Thalassolituus oleivorans R6-15
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Aeromonas hydrophila ML09-119
Aeromonas salmonicida
Aeromonas veronii
Aeromonas media
Tolumonas auensis
Oceanimonas sp. GK1
Dichelobacter nodosus
Gilliamella apicola
Simiduia agarivorans
Geobacter sulfurreducens PCA
Geobacter metallireducens
Geobacter uraniireducens
Geobacter lovleyi
Geobacter bemidjiensis
Geobacter sp. FRC-32
Geobacter sp. M21
Geobacter sp. M18
Pelobacter carbinolicus
Pelobacter propionicus
Desulfurivibrio alkaliphilus
Desulfobulbus propionicus
Desulfocapsa sulfexigens
Candidatus Desulfococcus oleovorans
Desulfatibacillum alkenivorans
Desulfobacterium autotrophicum
Desulfobacula toluolica
Syntrophobacter fumaroxidans
Desulfarculus baarsii
Magnetococcus marinus
Thermodesulfatator indicus
RNA degradosome
RNA degradosome
