KEGG Organisms: Complete Genomes
Eukaryotes: 151 + 17(draft) Bacteria: 1402 Archaea: 117
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Eukaryotes
Category
Species
Source
Animals
Vertebrates
Mammals
hsa
Homo sapiens (human)
RefSeq
ptr
Pan troglodytes (chimpanzee)
RefSeq
pon
Pongo abelii (Sumatran orangutan)
RefSeq
mcc
Macaca mulatta (rhesus monkey)
RefSeq
mmu
Mus musculus (mouse)
RefSeq
rno
Rattus norvegicus (rat)
RefSeq
cfa
Canis familiaris (dog)
RefSeq
aml
Ailuropoda melanoleuca (giant panda)
RefSeq
bta
Bos taurus (cow)
RefSeq
ssc
Sus scrofa (pig)
RefSeq
ecb
Equus caballus (horse)
RefSeq
mdo
Monodelphis domestica (opossum)
RefSeq
oaa
Ornithorhynchus anatinus (platypus)
RefSeq
Birds
gga
Gallus gallus (chicken)
RefSeq
mgp
Meleagris gallopavo (turkey)
RefSeq
tgu
Taeniopygia guttata (zebra finch)
RefSeq
Reptiles
acs
Anolis carolinensis (green anole)
RefSeq
Amphibians
xla
Xenopus laevis (African clawed frog)
RefSeq
xtr
Xenopus tropicalis (western clawed frog)
RefSeq
Fishes
dre
Danio rerio (zebrafish)
RefSeq
dfru
Fugu rubripes (Japanese puffer fish)
Ensembl
dtni
Tetraodon nigroviridis (green spotted pufferfish)
GenBank
dola
Oryzias latipes (Japanese medaka)
Ensembl
Lancelets
bfo
Branchiostoma floridae (Florida lancelet)
RefSeq
Ascidians
cin
Ciona intestinalis (sea squirt)
RefSeq
Echinoderms
spu
Strongylocentrotus purpuratus (purple sea urchin)
RefSeq
Arthropods
Insects
dme
Drosophila melanogaster (fruit fly)
RefSeq
dpo
Drosophila pseudoobscura pseudoobscura
RefSeq
dan
Drosophila ananassae
RefSeq
der
Drosophila erecta
RefSeq
dpe
Drosophila persimilis
RefSeq
dse
Drosophila sechellia
RefSeq
dsi
Drosophila simulans
RefSeq
dwi
Drosophila willistoni
RefSeq
dya
Drosophila yakuba
RefSeq
dgr
Drosophila grimshawi
RefSeq
dmo
Drosophila mojavensis
RefSeq
dvi
Drosophila virilis
RefSeq
aga
Anopheles gambiae (mosquito)
RefSeq
aag
Aedes aegypti (yellow fever mosquito)
RefSeq
cqu
Culex quinquefasciatus (southern house mosquito)
RefSeq
ame
Apis mellifera (honey bee)
RefSeq
nvi
Nasonia vitripennis (jewel wasp)
RefSeq
dbmo
Bombyx mori (silkmoth)
Beijing
tca
Tribolium castaneum (red flour beetle)
RefSeq
api
Acyrthosiphon pisum (pea aphid)
RefSeq
dapi
Acyrthosiphon pisum (pea aphid) (AphidBase)
AphidBase
phu
Pediculus humanus corporis (human body louse)
RefSeq
dphu
Pediculus humanus (human body louse) (VectorBase)
VectorBase
Crustaceans
ddpu
Daphnia pulex (water flea)
JGI
Mites and ticks
isc
Ixodes scapularis (black-legged tick)
RefSeq
Nematodes
cel
Caenorhabditis elegans (nematode)
RefSeq
cbr
Caenorhabditis briggsae
RefSeq
bmy
Brugia malayi (filaria)
RefSeq
tsp
Trichinella spiralis
RefSeq
Flatworms
smm
Schistosoma mansoni
RefSeq
Cnidarians
nve
Nematostella vectensis (sea anemone)
RefSeq
hmg
Hydra magnipapillata
RefSeq
Placozoans
tad
Trichoplax adhaerens
RefSeq
Plants
Eudicots
Mustard family
ath
Arabidopsis thaliana (thale cress)
RefSeq
aly
Arabidopsis lyrata (lyrate rockcress)
RefSeq
Pea family
dlja
Lotus japonicus (lotus)
Kazusa
dmtr
Medicago truncatula (barrel medic)
USDA
Willow family
pop
Populus trichocarpa (black cottonwood)
RefSeq
Spurge family
rcu
Ricinus communis (castor bean)
RefSeq
Grape family
vvi
Vitis vinifera (wine grape)
RefSeq
Monocots
Grass family
osa
Oryza sativa japonica (Japanese rice)
RefSeq
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
RAP-DB
dbdi
Brachypodium distachyon
USDA
sbi
Sorghum bicolor (sorghum)
RefSeq
zma
Zea mays (maize)
RefSeq
Ferns
smo
Selaginella moellendorffii
RefSeq
Mosses
ppp
Physcomitrella patens subsp. patens
RefSeq
Green algae
cre
Chlamydomonas reinhardtii
RefSeq
vcn
Volvox carteri f. nagariensis
RefSeq
olu
Ostreococcus lucimarinus
RefSeq
ota
Ostreococcus tauri
RefSeq
Red algae
cme
Cyanidioschyzon merolae
U Tokyo
Fungi
Ascomycetes
Saccharomycetes
sce
Saccharomyces cerevisiae (budding yeast)
RefSeq
dsrd
Saccharomyces paradoxus
SGD
dsmi
Saccharomyces mikatae
SGD
dsba
Saccharomyces bayanus
SGD
ago
Ashbya gossypii (Eremothecium gossypii)
RefSeq
kla
Kluyveromyces lactis
RefSeq
lth
Lachancea thermotolerans
RefSeq
dkwa
Kluyveromyces waltii
Nature
ppa
Pichia pastoris
RefSeq
vpo
Vanderwaltozyma polyspora
RefSeq
zro
Zygosaccharomyces rouxii
RefSeq
cgr
Candida glabrata
RefSeq
dha
Debaryomyces hansenii
RefSeq
pic
Scheffersomyces stipitis
RefSeq
pgu
Meyerozyma guilliermondii
RefSeq
lel
Lodderomyces elongisporus
RefSeq
cal
Candida albicans
RefSeq
ctp
Candida tropicalis
RefSeq
cdu
Candida dubliniensis
RefSeq
yli
Yarrowia lipolytica
RefSeq
clu
Clavispora lusitaniae
RefSeq
Sordariomycetes
ncr
Neurospora crassa
RefSeq
smp
Sordaria macrospora
RefSeq
pan
Podospora anserina
RefSeq
mgr
Magnaporthe oryzae
RefSeq
fgr
Fusarium graminearum
RefSeq
nhe
Nectria haematococca
RefSeq
Leotiomycetes
ssl
Sclerotinia sclerotiorum
RefSeq
bfu
Botryotinia fuckeliana
RefSeq
Eurotiomycetes
ani
Aspergillus nidulans
RefSeq
dani
Aspergillus nidulans (AspGD)
AspGD
afm
Aspergillus fumigatus
RefSeq
nfi
Neosartorya fischeri
RefSeq
aor
Aspergillus oryzae
RefSeq
ang
Aspergillus niger
RefSeq
afv
Aspergillus flavus
RefSeq
act
Aspergillus clavatus
RefSeq
pcs
Penicillium chrysogenum
RefSeq
cim
Coccidioides immitis
RefSeq
cpw
Coccidioides posadasii
RefSeq
ure
Uncinocarpus reesii
RefSeq
abe
Arthroderma benhamiae
RefSeq
tve
Trichophyton verrucosum
RefSeq
Dothideomycetes
pno
Phaeosphaeria nodorum
RefSeq
pte
Pyrenophora teres
RefSeq
Pezizomycetes
tml
Tuber melanosporum
RefSeq
Schizosaccharomycetes
spo
Schizosaccharomyces pombe (fission yeast)
RefSeq
Basidiomycetes
cne
Cryptococcus neoformans JEC21
RefSeq
cnb
Cryptococcus neoformans B-3501A
RefSeq
ppl
Postia placenta
RefSeq
dpch
Phanerochaete chrysosporium
JGI
lbc
Laccaria bicolor
RefSeq
mpr
Moniliophthora perniciosa
RefSeq
cci
Coprinopsis cinerea
RefSeq
scm
Schizophyllum commune
RefSeq
uma
Ustilago maydis
RefSeq
mgl
Malassezia globosa
RefSeq
Microsporidians
ecu
Encephalitozoon cuniculi
RefSeq
nce
Nosema ceranae
RefSeq
Protists
Choanoflagellates
mbr
Monosiga brevicollis
RefSeq
Amoeboflagellate
ngr
Naegleria gruberi
RefSeq
Amoebozoa
Dictyostelium
ddi
Dictyostelium discoideum (cellular slime mold)
RefSeq
Entamoeba
ehi
Entamoeba histolytica
RefSeq
edi
Entamoeba dispar
RefSeq
Alveolates
Apicomplexans
pfa
Plasmodium falciparum 3D7
RefSeq
pfd
Plasmodium falciparum Dd2
Broad
pfh
Plasmodium falciparum HB3
Broad
pyo
Plasmodium yoelii
RefSeq
pcb
Plasmodium chabaudi
RefSeq
pbe
Plasmodium berghei
RefSeq
pkn
Plasmodium knowlesi
RefSeq
pvx
Plasmodium vivax
RefSeq
tan
Theileria annulata
RefSeq
tpv
Theileria parva
RefSeq
bbo
Babesia bovis
RefSeq
cpv
Cryptosporidium parvum
RefSeq
cho
Cryptosporidium hominis
RefSeq
tgo
Toxoplasma gondii
RefSeq
Ciliates
tet
Tetrahymena thermophila
RefSeq
ptm
Paramecium tetraurelia
RefSeq
Euglenozoa
Kinetoplasts
tbr
Trypanosoma brucei
RefSeq
tcr
Trypanosoma cruzi
RefSeq
lma
Leishmania major
RefSeq
lif
Leishmania infantum
RefSeq
lbz
Leishmania braziliensis
RefSeq
Diplomonads
gla
Giardia lamblia
RefSeq
Parabasalids
tva
Trichomonas vaginalis
RefSeq
Diatoms
pti
Phaeodactylum tricornutum
RefSeq
tps
Thalassiosira pseudonana
RefSeq
Oomycetes
pif
Phytophthora infestans
RefSeq
Prokaryotes
Category
Species
Year
Source
Bacteria
Gammaproteobacteria
Escherichia
eco
Escherichia coli K-12 MG1655
1997
RefSeq
ecj
Escherichia coli K-12 W3110
2001
GenBank
ecd
Escherichia coli K-12 DH10B
2008
RefSeq
ebw
Escherichia coli K-12 MC4100(MuLac) BW2952
2009
RefSeq
ece
Escherichia coli O157:H7 EDL933 (EHEC)
2001
RefSeq
ecs
Escherichia coli O157:H7 Sakai (EHEC)
2001
RefSeq
ecf
Escherichia coli O157:H7 EC4115 (EHEC)
2008
RefSeq
etw
Escherichia coli O157:H7 TW14359 (EHEC)
2009
RefSeq
eoj
Escherichia coli O26:H11 11368 (EHEC)
2009
RefSeq
eoi
Escherichia coli O111:H- 11128 (EHEC)
2009
RefSeq
eoh
Escherichia coli O103:H2 12009 (EHEC)
2009
RefSeq
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
2008
RefSeq
eok
Escherichia coli O55:H7 CB9615 (EPEC)
2010
RefSeq
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
2002
RefSeq
ecp
Escherichia coli O6:K15:H31 536 (UPEC)
2006
RefSeq
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
2006
RefSeq
ecv
Escherichia coli O1:K1:H7 (APEC)
2006
RefSeq
ecx
Escherichia coli O9 HS (commensal)
2007
RefSeq
ecw
Escherichia coli O139:H28 E24377A (ETEC)
2007
RefSeq
ecm
Escherichia coli SMS-3-5 (environmental)
2008
RefSeq
ecy
Escherichia coli O152:H28 SE11 (commensal)
2008
RefSeq
ecr
Escherichia coli O8 IAI1 (commensal)
2009
RefSeq
ecq
Escherichia coli O81 ED1a (commensal)
2009
RefSeq
eck
Escherichia coli 55989 (EAEC)
2009
RefSeq
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
2009
RefSeq
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
2009
RefSeq
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
2009
RefSeq
ecl
Escherichia coli C ATCC 8739
2008
RefSeq
ebr
Escherichia coli B REL606
2009
RefSeq
ebd
Escherichia coli BL21-Gold(DE3)pLysS AG
2009
RefSeq
efe
Escherichia fergusonii
2008
RefSeq
Salmonella
sty
Salmonella enterica subsp. enterica serovar Typhi CT18
2001
RefSeq
stt
Salmonella enterica subsp. enterica serovar Typhi Ty2
2003
RefSeq
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
2001
RefSeq
spt
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
2004
RefSeq
sek
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
2008
RefSeq
spq
Salmonella enterica subsp. enterica serovar Paratyphi B
2007
RefSeq
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
2009
RefSeq
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
2005
RefSeq
seh
Salmonella enterica subsp. enterica serovar Heidelberg
2008
RefSeq
see
Salmonella enterica subsp. enterica serovar Newport
2008
RefSeq
sew
Salmonella enterica subsp. enterica serovar Schwarzengrund
2008
RefSeq
sea
Salmonella enterica subsp. enterica serovar Agona
2008
RefSeq
sed
Salmonella enterica subsp. enterica serovar Dublin
2008
RefSeq
seg
Salmonella enterica subsp. enterica serovar Gallinarum
2008
RefSeq
set
Salmonella enterica subsp. enterica serovar Enteritidis
2008
RefSeq
ses
Salmonella enterica subsp. arizonae
2007
RefSeq
sbg
Salmonella bongori
2011
RefSeq
Yersinia
ype
Yersinia pestis CO92 (biovar Orientalis)
2001
RefSeq
ypk
Yersinia pestis KIM 10 (biovar Mediaevalis)
2002
RefSeq
ypa
Yersinia pestis Antiqua (biovar Antiqua)
2006
RefSeq
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
2006
RefSeq
ypm
Yersinia pestis 91001 (biovar Microtus)
2004
RefSeq
ypp
Yersinia pestis Pestoides F
2007
RefSeq
ypg
Yersinia pestis Angola
2007
RefSeq
ypz
Yersinia pestis Z176003
2010
RefSeq
yps
Yersinia pseudotuberculosis IP32953 (serotype I)
2004
RefSeq
ypi
Yersinia pseudotuberculosis IP31758 (serotype O:1b)
2007
RefSeq
ypy
Yersinia pseudotuberculosis YPIII
2008
RefSeq
ypb
Yersinia pseudotuberculosis PB1/+
2008
RefSeq
yen
Yersinia enterocolitica subsp. enterocolitica 8081
2007
RefSeq
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r)
2011
RefSeq
Shigella
sfl
Shigella flexneri 301 (serotype 2a)
2002
RefSeq
sfx
Shigella flexneri 2457T (serotype 2a)
2003
RefSeq
sfv
Shigella flexneri 8401 (serotype 5b)
2006
RefSeq
ssn
Shigella sonnei
2005
RefSeq
sbo
Shigella boydii Sb227
2005
RefSeq
sbc
Shigella boydii CDC 3083-94
2008
RefSeq
sdy
Shigella dysenteriae
2005
RefSeq
Pectobacterium
eca
Pectobacterium atrosepticum
2004
RefSeq
pct
Pectobacterium carotovorum
2009
RefSeq
pwa
Pectobacterium wasabiae
2009
RefSeq
Erwinia
eta
Erwinia tasmaniensis
2008
RefSeq
epy
Erwinia pyrifoliae
2009
RefSeq
eam
Erwinia amylovora CFBP1430
2010
RefSeq
eay
Erwinia amylovora ATCC 49946
2010
RefSeq
ebi
Erwinia billingiae
2010
RefSeq
Photorhabdus
plu
Photorhabdus luminescens
2003
RefSeq
pay
Photorhabdus asymbiotica
2009
RefSeq
Buchnera
buc
Buchnera aphidicola APS
2000
RefSeq
bas
Buchnera aphidicola Sg
2002
RefSeq
bab
Buchnera aphidicola Bp
2003
RefSeq
bcc
Buchnera aphidicola Cc
2006
RefSeq
bap
Buchnera aphidicola 5A
2009
RefSeq
bau
Buchnera aphidicola Tuc7
2009
RefSeq
baj
Buchnera aphidicola (Cinara tujafilina)
2011
RefSeq
Wigglesworthia
wbr
Wigglesworthia glossinidia
2002
RefSeq
Sodalis
sgl
Sodalis glossinidius
2006
RefSeq
Enterobacter
ent
Enterobacter sp. 638
2007
RefSeq
enc
Enterobacter cloacae subsp. cloacae ATCC 13047
2010
RefSeq
esc
Enterobacter cloacae SCF1
2010
RefSeq
eec
Enterobacter cloacae EcWSU1
2012
RefSeq
eas
Enterobacter asburiae
2011
RefSeq
eae
Enterobacter aerogenes
2011
RefSeq
Cronobacter
esa
Cronobacter sakazakii
2007
RefSeq
ctu
Cronobacter turicensis
2009
RefSeq
Klebsiella
kpn
Klebsiella pneumoniae
2007
RefSeq
kpe
Klebsiella pneumoniae 342
2008
RefSeq
kpu
Klebsiella pneumoniae NTUH-K2044
2009
RefSeq
kva
Klebsiella variicola
2010
RefSeq
Citrobacter
cko
Citrobacter koseri ATCC BAA-895
2007
RefSeq
cro
Citrobacter rodentium
2010
RefSeq
Serratia
spe
Serratia proteamaculans
2007
RefSeq
srs
Serratia sp. AS12
2011
RefSeq
srr
Serratia sp. AS9
2011
RefSeq
ssz
Serratia symbiotica
2012
RefSeq
Proteus
pmr
Proteus mirabilis
2008
RefSeq
Edwardsiella
eic
Edwardsiella ictaluri
2009
RefSeq
etr
Edwardsiella tarda
2009
RefSeq
Blochmannia
bfl
Candidatus Blochmannia floridanus
2003
RefSeq
bpn
Candidatus Blochmannia pennsylvanicus
2005
RefSeq
bva
Candidatus Blochmannia vafer
2011
RefSeq
Hamiltonella
hde
Candidatus Hamiltonella defensa
2009
RefSeq
Dickeya
dda
Dickeya dadantii Ech703
2009
RefSeq
ddc
Dickeya dadantii Ech586
2009
RefSeq
ddd
Dickeya dadantii 3937
2010
RefSeq
dze
Dickeya zeae
2009
RefSeq
Xenorhabdus
xbo
Xenorhabdus bovienii
2010
RefSeq
xne
Xenorhabdus nematophila
2010
RefSeq
Pantoea
pam
Pantoea ananatis
2010
RefSeq
pva
Pantoea vagans
2010
RefSeq
pao
Pantoea sp. At-9b
2011
RefSeq
Riesia
rip
Candidatus Riesia pediculicola
2010
RefSeq
Rahnella
rah
Rahnella sp. Y9602
2011
RefSeq
Moranella
men
Candidatus Moranella endobia
2011
RefSeq
Haemophilus
hin
Haemophilus influenzae Rd KW20 (serotype d)
1995
RefSeq
hit
Haemophilus influenzae 86-028NP (nontypeable)
2005
RefSeq
hip
Haemophilus influenzae PittEE
2007
RefSeq
hiq
Haemophilus influenzae PittGG
2007
RefSeq
hif
Haemophilus influenzae F3031
2011
RefSeq
hil
Haemophilus influenzae F3047
2011
RefSeq
hdu
Haemophilus ducreyi
2003
RefSeq
hap
Haemophilus parasuis
2009
RefSeq
hpr
Haemophilus parainfluenzae
2011
RefSeq
Histophilus
hso
Haemophilus somnus 129PT
2006
RefSeq
hsm
Haemophilus somnus 2336
2008
RefSeq
Pasteurella
pmu
Pasteurella multocida
2001
RefSeq
Mannheimia
msu
Mannheimia succiniciproducens
2004
RefSeq
Actinobacillus
apl
Actinobacillus pleuropneumoniae L20 (serotype 5b)
2007
RefSeq
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
2008
RefSeq
apa
Actinobacillus pleuropneumoniae AP76 (serotype 7)
2008
RefSeq
asu
Actinobacillus succinogenes
2007
RefSeq
Aggregatibacter
aap
Aggregatibacter aphrophilus
2009
RefSeq
aat
Aggregatibacter actinomycetemcomitans D11S-1
2009
RefSeq
aao
Aggregatibacter actinomycetemcomitans ANH9381
2012
RefSeq
Gallibacterium
gan
Gallibacterium anatis
2011
RefSeq
Xylella
xfa
Xylella fastidiosa 9a5c
2000
RefSeq
xft
Xylella fastidiosa Temecula1
2003
RefSeq
xfm
Xylella fastidiosa M12
2008
RefSeq
xfn
Xylella fastidiosa M23
2008
RefSeq
Xanthomonas
xcc
Xanthomonas campestris pv. campestris ATCC 33913
2002
RefSeq
xcb
Xanthomonas campestris pv. campestris 8004
2005
RefSeq
xca
Xanthomonas campestris pv. campestris B100
2008
RefSeq
xcv
Xanthomonas campestris pv. vesicatoria
2005
RefSeq
xac
Xanthomonas axonopodis pv. citri 306
2002
RefSeq
xax
Xanthomonas axonopodis pv. citrumelo F1
2011
RefSeq
xoo
Xanthomonas oryzae KACC10331
2005
RefSeq
xom
Xanthomonas oryzae MAFF311018
2006
RefSeq
xop
Xanthomonas oryzae PXO99A
2008
RefSeq
xal
Xanthomonas albilineans
2010
RefSeq
Stenotrophomonas
sml
Stenotrophomonas maltophilia K279a
2008
RefSeq
smt
Stenotrophomonas maltophilia R551-3
2008
RefSeq
Pseudoxanthomonas
psu
Pseudoxanthomonas suwonensis
2011
RefSeq
psd
Pseudoxanthomonas spadix
2011
RefSeq
Vibrio
vch
Vibrio cholerae O1 biovar El Tor N16961
2000
RefSeq
vce
Vibrio cholerae O1 2010EL-1786
2011
RefSeq
vco
Vibrio cholerae O395
2007
RefSeq
vcm
Vibrio cholerae M66-2
2009
RefSeq
vcj
Vibrio cholerae MJ-1236
2009
RefSeq
vvu
Vibrio vulnificus CMCP6
2002
RefSeq
vvy
Vibrio vulnificus YJ016
2003
RefSeq
vvm
Vibrio vulnificus MO6-24/O
2011
RefSeq
vpa
Vibrio parahaemolyticus
2003
RefSeq
vha
Vibrio harveyi
2007
RefSeq
vsp
Vibrio splendidus
2008
RefSeq
vex
Vibrio sp. Ex25
2009
RefSeq
Aliivibrio
vfi
Vibrio fischeri
2005
RefSeq
vfm
Vibrio fischeri MJ11
2008
RefSeq
vsa
Aliivibrio salmonicida LFI1238
2008
RefSeq
Photobacterium
ppr
Photobacterium profundum
2004
RefSeq
Listonella
van
Vibrio anguillarum
2011
RefSeq
Pseudomonas
pae
Pseudomonas aeruginosa PAO1
2000
RefSeq
pau
Pseudomonas aeruginosa UCBPP-PA14
2006
RefSeq
pap
Pseudomonas aeruginosa PA7
2007
RefSeq
pag
Pseudomonas aeruginosa LESB58
2009
RefSeq
ppu
Pseudomonas putida KT2440
2003
RefSeq
ppf
Pseudomonas putida F1
2007
RefSeq
ppg
Pseudomonas putida GB-1
2008
RefSeq
ppw
Pseudomonas putida W619
2008
RefSeq
ppt
Pseudomonas putida S16
2011
RefSeq
pst
Pseudomonas syringae pv. tomato DC3000
2003
RefSeq
psb
Pseudomonas syringae pv. syringae B728a
2005
RefSeq
psp
Pseudomonas syringae pv. phaseolicola 1448A
2005
RefSeq
pfl
Pseudomonas fluorescens Pf-5
2005
RefSeq
pfo
Pseudomonas fluorescens Pf0-1
2005
RefSeq
pfs
Pseudomonas fluorescens SBW25
2009
RefSeq
pen
Pseudomonas entomophila
2006
RefSeq
pmy
Pseudomonas mendocina ymp
2007
RefSeq
pmk
Pseudomonas mendocina NK-01
2011
RefSeq
psa
Pseudomonas stutzeri
2007
RefSeq
psz
Pseudomonas stutzeri ATCC 17588
2011
RefSeq
pba
Pseudomonas brassicacearum
2011
RefSeq
pfv
Pseudomonas fulva
2011
RefSeq
Cellvibrio
cja
Cellvibrio japonicus
2008
RefSeq
cga
Cellvibrio gilvus
2011
RefSeq
Azotobacter
avn
Azotobacter vinelandii
2009
RefSeq
Psychrobacter
par
Psychrobacter arcticum
2005
RefSeq
pcr
Psychrobacter cryohalolentis
2006
RefSeq
prw
Psychrobacter sp. PRwf-1
2007
RefSeq
Acinetobacter
aci
Acinetobacter sp. ADP1
2004
RefSeq
acd
Acinetobacter sp. DR1
2010
RefSeq
acb
Acinetobacter baumannii ATCC 17978
2007
RefSeq
abm
Acinetobacter baumannii SDF
2008
RefSeq
aby
Acinetobacter baumannii AYE
2008
RefSeq
abc
Acinetobacter baumannii ACICU
2008
RefSeq
abn
Acinetobacter baumannii AB0057
2008
RefSeq
abb
Acinetobacter baumannii AB307-0294
2008
RefSeq
Moraxella
mct
Moraxella catarrhalis
2010
RefSeq
Shewanella
son
Shewanella oneidensis
2002
RefSeq
sdn
Shewanella denitrificans
2006
RefSeq
sfr
Shewanella frigidimarina
2006
RefSeq
saz
Shewanella amazonensis
2006
RefSeq
sbl
Shewanella baltica OS155
2007
RefSeq
sbm
Shewanella baltica OS185
2007
RefSeq
sbn
Shewanella baltica OS195
2007
RefSeq
sbp
Shewanella baltica OS223
2008
RefSeq
slo
Shewanella loihica
2007
RefSeq
spc
Shewanella putrefaciens
2007
RefSeq
sse
Shewanella sediminis
2007
RefSeq
spl
Shewanella pealeana
2007
RefSeq
she
Shewanella sp. MR-4
2006
RefSeq
shm
Shewanella sp. MR-7
2006
RefSeq
shn
Shewanella sp. ANA-3
2006
RefSeq
shw
Shewanella sp. W3-18-1
2007
RefSeq
shl
Shewanella halifaxensis
2008
RefSeq
swd
Shewanella woodyi ATCC 51908
2008
RefSeq
swp
Shewanella piezotolerans WP3
2008
RefSeq
svo
Shewanella violacea
2010
RefSeq
Idiomarina
ilo
Idiomarina loihiensis
2004
RefSeq
Colwellia
cps
Colwellia psychrerythraea
2005
RefSeq
Pseudoalteromonas
pha
Pseudoalteromonas haloplanktis
2005
RefSeq
pat
Pseudoalteromonas atlantica
2006
RefSeq
psm
Pseudoalteromonas sp. SM9913
2010
RefSeq
Saccharophagus
sde
Saccharophagus degradans
2006
RefSeq
Marinobacter
maq
Marinobacter aquaeolei
2007
RefSeq
Alteromonas
amc
Alteromonas macleodii
2008
RefSeq
alt
Alteromonas sp. SN2
2011
RefSeq
Glaciecola
gag
Glaciecola sp. 4H-3-7+YE-5
2011
RefSeq
gni
Glaciecola nitratireducens
2011
RefSeq
Psychromonas
pin
Psychromonas ingrahamii
2006
RefSeq
Teredinibacter
ttu
Teredinibacter turnerae
2009
RefSeq
Ferrimonas
fbl
Ferrimonas balearica
2010
RefSeq
Coxiella
cbu
Coxiella burnetii RSA 493
2003
RefSeq
cbs
Coxiella burnetii RSA 331
2007
RefSeq
cbd
Coxiella burnetii Dugway 5J108-111
2007
RefSeq
cbg
Coxiella burnetii CbuG_Q212
2008
RefSeq
cbc
Coxiella burnetii CbuK_Q154
2008
RefSeq
Legionella
lpn
Legionella pneumophila Philadelphia 1
2004
RefSeq
lpf
Legionella pneumophila Lens
2004
RefSeq
lpp
Legionella pneumophila Paris
2004
RefSeq
lpc
Legionella pneumophila Corby
2007
RefSeq
lpa
Legionella pneumophila 2300/99 Alcoy
2010
RefSeq
llo
Legionella longbeachae
2010
RefSeq
Methylococcus
mca
Methylococcus capsulatus
2004
RefSeq
Methylomonas
mmt
Methylomonas methanica
2011
RefSeq
Methylomicrobium
mah
Methylomicrobium alcaliphilum
2011
RefSeq
Francisella
ftu
Francisella tularensis subsp. tularensis SCHU S4
2004
RefSeq
ftf
Francisella tularensis subsp. tularensis FSC 198
2006
RefSeq
ftw
Francisella tularensis subsp. tularensis WY96-3418
2007
RefSeq
ftl
Francisella tularensis subsp. holarctica LVS
2006
RefSeq
fth
Francisella tularensis subsp. holarctica OSU18
2006
RefSeq
fta
Francisella tularensis subsp. holarctica FTNF002-00
2007
RefSeq
ftm
Francisella tularensis subsp. mediasiatica FSC147
2008
RefSeq
ftn
Francisella novicida U112
2006
RefSeq
fph
Francisella philomiragia
2008
RefSeq
frt
Francisella sp. TX077308
2011
RefSeq
Thiomicrospira
tcx
Thiomicrospira crunogena
2005
RefSeq
Thioalkalimicrobium
tcy
Thioalkalimicrobium cyclicum
2011
RefSeq
Nitrosococcus
noc
Nitrosococcus oceani
2005
RefSeq
nhl
Nitrosococcus halophilus
2010
RefSeq
nwa
Nitrosococcus watsonii
2010
RefSeq
Allochromatium
alv
Allochromatium vinosum
2010
RefSeq
Alkalilimnicola
aeh
Alkalilimnicola ehrlichei
2006
RefSeq
Halorhodospira
hha
Halorhodospira halophila
2007
RefSeq
Thioalkalivibrio
tgr
Thioalkalivibrio sp. HL-EbGR7
2009
RefSeq
tkm
Thioalkalivibrio sp. K90mix
2010
RefSeq
Halothiobacillus
hna
Halothiobacillus neapolitanus
2009
RefSeq
Hahella
hch
Hahella chejuensis
2005
RefSeq
Chromohalobacter
csa
Chromohalobacter salexigens
2006
RefSeq
Halomonas
hel
Halomonas elongata
2010
RefSeq
Alcanivorax
abo
Alcanivorax borkumensis
2006
RefSeq
Kangiella
kko
Kangiella koreensis
2009
RefSeq
Marinomonas
mmw
Marinomonas sp. MWYL1
2007
RefSeq
mme
Marinomonas mediterranea
2011
RefSeq
mpc
Marinomonas posidonica
2011
RefSeq
Aeromonas
aha
Aeromonas hydrophila
2006
RefSeq
asa
Aeromonas salmonicida
2007
RefSeq
avr
Aeromonas veronii
2011
RefSeq
Tolumonas
tau
Tolumonas auensis
2009
RefSeq
Oceanimonas
oce
Oceanimonas sp. GK1
2012
RefSeq
Dichelobacter
dno
Dichelobacter nodosus
2007
RefSeq
Acidithiobacillus
afe
Acidithiobacillus ferrooxidans ATCC 53993
2008
RefSeq
afr
Acidithiobacillus ferrooxidans ATCC 23270
2008
RefSeq
acu
Acidithiobacillus caldus
2011
RefSeq
afi
Acidithiobacillus ferrivorans
2011
RefSeq
Baumannia
bci
Baumannia cicadellinicola
2006
RefSeq
Carsonella
crp
Candidatus Carsonella ruddii
2006
RefSeq
Ruthia
rma
Candidatus Ruthia magnifica
2006
RefSeq
Vesicomyosocius
vok
Candidatus Vesicomyosocius okutanii
2007
RefSeq
Unclassified Gammaproteobacteria
gpb
Gamma proteobacterium HdN1
2010
RefSeq
Betaproteobacteria
Neisseria
nma
Neisseria meningitidis Z2491 (serogroup A)
2000
RefSeq
nme
Neisseria meningitidis MC58 (serogroup B)
2000
RefSeq
nmc
Neisseria meningitidis FAM18 (serogroup C)
2007
RefSeq
nmn
Neisseria meningitidis 053442 (serogroup C)
2007
RefSeq
nmi
Neisseria meningitidis alpha14
2009
RefSeq
ngo
Neisseria gonorrhoeae FA 1090
2005
RefSeq
ngk
Neisseria gonorrhoeae NCCP11945
2008
RefSeq
nla
Neisseria lactamica
2010
RefSeq
Chromobacterium
cvi
Chromobacterium violaceum
2003
RefSeq
Laribacter
lhk
Laribacter hongkongensis
2009
RefSeq
Pseudogulbenkiania
pse
Pseudogulbenkiania sp. NH8B
2011
RefSeq
Ralstonia
rso
Ralstonia solanacearum GMI1000
2001
RefSeq
rsc
Ralstonia solanacearum CFBP2957
2010
RefSeq
rsl
Ralstonia solanacearum PSI07
2010
RefSeq
rpi
Ralstonia pickettii 12J
2008
RefSeq
rpf
Ralstonia pickettii 12D
2009
RefSeq
Cupriavidus
reu
Ralstonia eutropha JMP134
2005
RefSeq
reh
Ralstonia eutropha H16
2006
RefSeq
rme
Cupriavidus metallidurans
2006
RefSeq
cti
Cupriavidus taiwanensis
2008
RefSeq
cnc
Cupriavidus necator
2011
RefSeq
Burkholderia
bma
Burkholderia mallei ATCC 23344
2004
RefSeq
bmv
Burkholderia mallei SAVP1
2007
RefSeq
bml
Burkholderia mallei NCTC 10229
2007
RefSeq
bmn
Burkholderia mallei NCTC 10247
2007
RefSeq
bps
Burkholderia pseudomallei K96243
2004
RefSeq
bpm
Burkholderia pseudomallei 1710b
2005
RefSeq
bpl
Burkholderia pseudomallei 1106a
2007
RefSeq
bpd
Burkholderia pseudomallei 668
2007
RefSeq
bpr
Burkholderia pseudomallei MSHR346
2009
RefSeq
bte
Burkholderia thailandensis
2005
RefSeq
bvi
Burkholderia vietnamiensis
2007
RefSeq
bur
Burkholderia sp. 383
2005
RefSeq
bcn
Burkholderia cenocepacia AU1054
2006
RefSeq
bch
Burkholderia cenocepacia HI2424
2006
RefSeq
bcm
Burkholderia cenocepacia MC0-3
2008
RefSeq
bcj
Burkholderia cenocepacia J2315
2008
RefSeq
bam
Burkholderia ambifaria AMMD
2006
RefSeq
bac
Burkholderia ambifaria MC40-6
2008
RefSeq
bmu
Burkholderia multivorans ATCC 17616 (JGI)
2007
RefSeq
bmj
Burkholderia multivorans ATCC 17616 (Tohoku)
2008
RefSeq
bxe
Burkholderia xenovorans
2006
RefSeq
bph
Burkholderia phymatum
2008
RefSeq
bpy
Burkholderia phytofirmans
2008
RefSeq
bgl
Burkholderia glumae
2009
RefSeq
bug
Burkholderia sp. CCGE1001
2011
RefSeq
bge
Burkholderia sp. CCGE1002
2010
RefSeq
bgf
Burkholderia sp. CCGE1003
2010
RefSeq
brh
Burkholderia rhizoxinica
2010
RefSeq
bgd
Burkholderia gladioli
2011
RefSeq
buj
Stenotrophomonas maltophilia JV3
2011
RefSeq
Polynucleobacter
pnu
Polynucleobacter sp. QLW-P1DMWA-1
2007
RefSeq
pne
Polynucleobacter necessarius
2008
RefSeq
Bordetella
bpe
Bordetella pertussis
2003
RefSeq
bpa
Bordetella parapertussis
2003
RefSeq
bbr
Bordetella bronchiseptica
2003
RefSeq
bpt
Bordetella petrii
2007
RefSeq
bav
Bordetella avium
2008
RefSeq
Achromobacter
axy
Achromobacter xylosoxidans
2010
RefSeq
Taylorella
teq
Taylorella equigenitalis
2011
RefSeq
tas
Taylorella asinigenitalis
2011
RefSeq
Pusillimonas
put
Pusillimonas sp. T7-7
2011
RefSeq
Rhodoferax
rfr
Rhodoferax ferrireducens
2006
RefSeq
Polaromonas
pol
Polaromonas sp. JS666
2006
RefSeq
pna
Polaromonas naphthalenivorans
2007
RefSeq
Acidovorax
aav
Acidovorax avenae
2007
RefSeq
ajs
Acidovorax sp. JS42
2007
RefSeq
dia
Acidovorax ebreus
2009
RefSeq
aaa
Acidovorax avenae subsp. avenae ATCC 19860
2011
RefSeq
Verminephrobacter
vei
Verminephrobacter eiseniae
2007
RefSeq
Delftia
dac
Delftia acidovorans
2007
RefSeq
del
Delftia sp. Cs1-4
2011
RefSeq
Variovorax
vap
Variovorax paradoxus S110
2009
RefSeq
vpe
Variovorax paradoxus EPS
2011
RefSeq
Comamonas
ctt
Comamonas testosteroni
2009
RefSeq
Alicycliphilus
adn
Alicycliphilus denitrificans BC
2011
RefSeq
adk
Alicycliphilus denitrificans K601
2011
RefSeq
Ramlibacter
rta
Ramlibacter tataouinensis
2011
RefSeq
Methylibium
mpt
Methylibium petroleiphilum
2007
RefSeq
Herminiimonas
har
Herminiimonas arsenicoxydans
2007
RefSeq
Minibacterium
mms
Minibacterium massiliensis
2007
RefSeq
Herbaspirillum
hse
Herbaspirillum seropedicae
2010
RefSeq
Zinderia
zin
Candidatus Zinderia insecticola CARI
2010
RefSeq
Collimonas
cfu
Collimonas fungivorans
2011
RefSeq
Leptothrix
lch
Leptothrix cholodnii
2008
RefSeq
Thiomonas
tin
Thiomonas intermedia
2010
RefSeq
Nitrosomonas
neu
Nitrosomonas europaea
2003
RefSeq
net
Nitrosomonas eutropha
2006
RefSeq
nit
Nitrosomonas sp. AL212
2011
RefSeq
nii
Nitrosomonas sp. Is79A3
2011
RefSeq
Nitrosospira
nmu
Nitrosospira multiformis
2005
RefSeq
Aromatoleum
eba
Aromatoleum aromaticum EbN1
2004
RefSeq
Azoarcus
azo
Azoarcus sp. BH72
2006
RefSeq
Dechloromonas
dar
Dechloromonas aromatica
2005
RefSeq
Thauera
tmz
Thauera sp. MZ1T
2008
RefSeq
Azospira
dsu
Dechlorosoma suillum
2012
RefSeq
Thiobacillus
tbd
Thiobacillus denitrificans
2005
RefSeq
Methylobacillus
mfa
Methylobacillus flagellatus
2006
RefSeq
Methylotenera
mmb
Methylotenera mobilis
2009
RefSeq
meh
Methylotenera sp. 301
2010
RefSeq
Methylovorus
mei
Methylovorus glucosetrophus SIP3-4
2009
RefSeq
mep
Methylovorus sp. MP688
2010
RefSeq
Accumulibacter
app
Accumulibacter phosphatis
2009
RefSeq
Tremblaya
tpn
Candidatus Tremblaya princeps
2011
RefSeq
Sideroxydans
slt
Sideroxydans lithotrophicus
2010
RefSeq
Gallionella
gca
Gallionella capsiferriformans
2010
RefSeq
Epsilonproteobacteria
Helicobacter
hpy
Helicobacter pylori 26695
1997
RefSeq
hpj
Helicobacter pylori J99
1999
RefSeq
hpa
Helicobacter pylori HPAG1
2006
RefSeq
hps
Helicobacter pylori Shi470
2008
RefSeq
hpg
Helicobacter pylori G27
2008
RefSeq
hpp
Helicobacter pylori P12
2008
RefSeq
hpb
Helicobacter pylori B38
2009
RefSeq
hpl
Helicobacter pylori B8
2010
RefSeq
hpc
Helicobacter pylori PeCan4
2010
RefSeq
hpm
Helicobacter pylori SJM180
2010
RefSeq
hhe
Helicobacter hepaticus
2003
RefSeq
hac
Helicobacter acinonychis
2006
RefSeq
hms
Helicobacter mustelae
2010
RefSeq
hfe
Helicobacter felis
2010
RefSeq
hbi
Helicobacter bizzozeronii
2011
RefSeq
Wolinella
wsu
Wolinella succinogenes
2003
RefSeq
Sulfurimonas
tdn
Sulfurimonas denitrificans
2005
RefSeq
sua
Sulfurimonas autotrophica
2010
RefSeq
Sulfuricurvum
sku
Sulfuricurvum kujiense
2010
RefSeq
Campylobacter
cje
Campylobacter jejuni NCTC11168
2000
RefSeq
cjr
Campylobacter jejuni RM1221
2005
RefSeq
cjj
Campylobacter jejuni 81-176
2007
RefSeq
cju
Campylobacter jejuni 81116
2007
RefSeq
cjn
Campylobacter jejuni ICDCCJ07001
2010
RefSeq
cjd
Campylobacter jejuni subsp. doylei 269.97
2007
RefSeq
cff
Campylobacter fetus
2006
RefSeq
ccv
Campylobacter curvus
2007
RefSeq
cha
Campylobacter hominis ATCC BAA-381
2007
RefSeq
cco
Campylobacter concisus 13826
2007
RefSeq
cla
Campylobacter lari
2009
RefSeq
Arcobacter
abu
Arcobacter butzleri
2007
RefSeq
ant
Arcobacter nitrofigilis
2010
RefSeq
Sulfurospirillum
sdl
Sulfurospirillum deleyianum
2009
RefSeq
Nitratiruptor
nis
Nitratiruptor sp. SB155-2
2007
RefSeq
Sulfurovum
sun
Sulfurovum sp. NBC37-1
2007
RefSeq
Nitratifractor
nsa
Nitratifractor salsuginis
2011
RefSeq
Nautilia
nam
Nautilia profundicola
2009
RefSeq
Deltaproteobacteria
Geobacter
gsu
Geobacter sulfurreducens
2003
RefSeq
gme
Geobacter metallireducens
2005
RefSeq
gur
Geobacter uraniumreducens
2007
RefSeq
glo
Geobacter lovleyi
2008
RefSeq
gbm
Geobacter bemidjiensis
2008
RefSeq
geo
Geobacter sp. FRC-32
2009
RefSeq
gem
Geobacter sp. M21
2009
RefSeq
geb
Geobacter sp. M18
2011
RefSeq
Pelobacter
pca
Pelobacter carbinolicus
2005
RefSeq
ppd
Pelobacter propionicus
2006
RefSeq
Desulfovibrio
dvu
Desulfovibrio vulgaris Hildenborough
2004
RefSeq
dvl
Desulfovibrio vulgaris DP4
2007
RefSeq
dvm
Desulfovibrio vulgaris Miyazaki F
2009
RefSeq
dde
Desulfovibrio desulfuricans G20
2005
RefSeq
dds
Desulfovibrio desulfuricans ATCC 27774
2009
RefSeq
dma
Desulfovibrio magneticus
2009
RefSeq
dsa
Desulfovibrio salexigens
2009
RefSeq
das
Desulfovibrio aespoeensis
2011
RefSeq
daf
Desulfovibrio africanus
2012
RefSeq
Lawsonia
lip
Lawsonia intracellularis
2006
RefSeq
Desulfomicrobium
dba
Desulfomicrobium baculatum
2009
RefSeq
Desulfohalobium
drt
Desulfohalobium retbaense
2009
RefSeq
Bdellovibrio
bba
Bdellovibrio bacteriovorus
2004
RefSeq
Bacteriovorax
bmx
Bacteriovorax marinus SJ
2012
RefSeq
Desulfotalea
dps
Desulfotalea psychrophila
2004
RefSeq
Desulfurivibrio
dak
Desulfurivibrio alkaliphilus
2010
RefSeq
Desulfobulbus
dpr
Desulfobulbus propionicus
2011
RefSeq
Desulfococcus
dol
Candidatus Desulfococcus oleovorans
2007
RefSeq
Desulfatibacillum
dal
Desulfatibacillum alkenivorans
2009
RefSeq
Desulfobacterium
dat
Desulfobacterium autotrophicum
2009
RefSeq
Anaeromyxobacter
ade
Anaeromyxobacter dehalogenans 2CP-C
2006
RefSeq
acp
Anaeromyxobacter dehalogenans 2CP-1
2009
RefSeq
afw
Anaeromyxobacter sp. Fw109-5
2007
RefSeq
ank
Anaeromyxobacter sp. K
2008
RefSeq
Myxococcus
mxa
Myxococcus xanthus
2006
RefSeq
mfu
Myxococcus fulvus
2011
RefSeq
Stigmatella
sur
Stigmatella aurantiaca
2011
RefSeq
Sorangium
scl
Sorangium cellulosum
2007
RefSeq
Haliangium
hoh
Haliangium ochraceum
2009
RefSeq
Syntrophus
sat
Syntrophus aciditrophicus
2006
RefSeq
Desulfobacca
dao
Desulfobacca acetoxidans DSM 11109
2011
RefSeq
Syntrophobacter
sfu
Syntrophobacter fumaroxidans
2006
RefSeq
Desulfarculus
dbr
Desulfarculus baarsii
2010
RefSeq
Hippea
hmr
Hippea maritima
2011
RefSeq
Alphaproteobacteria
Rickettsia
rpr
Rickettsia prowazekii
1998
RefSeq
rty
Rickettsia typhi
2004
RefSeq
rcm
Rickettsia canadensis
2007
RefSeq
rco
Rickettsia conorii
2001
RefSeq
rfe
Rickettsia felis
2005
RefSeq
rak
Rickettsia akari
2007
RefSeq
rri
Rickettsia rickettsii Sheila Smith
2007
RefSeq
rrj
Rickettsia rickettsii Iowa
2008
RefSeq
rms
Rickettsia massiliae
2007
RefSeq
rpk
Rickettsia peacockii
2009
RefSeq
raf
Rickettsia africae
2009
RefSeq
rhe
Rickettsia heilongjiangensis
2011
RefSeq
rja
Rickettsia japonica
2011
RefSeq
rsv
Rickettsia slovaca
2012
RefSeq
rbe
Rickettsia bellii RML369-C
2006
RefSeq
rbo
Rickettsia bellii OSU 85-389
2007
RefSeq
Orientia
ots
Orientia tsutsugamushi Boryong
2007
RefSeq
ott
Orientia tsutsugamushi Ikeda
2008
RefSeq
Wolbachia
wol
Wolbachia wMel
2004
RefSeq
wbm
Wolbachia wBm
2005
RefSeq
wri
Wolbachia sp. wRi
2009
RefSeq
wpi
Wolbachia pipientis
2008
RefSeq
Anaplasma
ama
Anaplasma marginale St. Maries
2004
RefSeq
amf
Anaplasma marginale Florida
2009
RefSeq
acn
Anaplasma centrale
2009
RefSeq
aph
Anaplasma phagocytophilum
2006
RefSeq
Ehrlichia
eru
Ehrlichia ruminantium Welgevonden (South Africa)
2005
RefSeq
erw
Ehrlichia ruminantium Welgevonden (France)
2005
RefSeq
erg
Ehrlichia ruminantium Gardel
2005
RefSeq
ecn
Ehrlichia canis
2005
RefSeq
ech
Ehrlichia chaffeensis
2006
RefSeq
Neorickettsia
nse
Neorickettsia sennetsu
2006
RefSeq
nri
Neorickettsia risticii
2009
RefSeq
Pelagibacter
pub
Candidatus Pelagibacter ubique
2005
RefSeq
pel
Candidatus Pelagibacter sp. IMCC9063
2011
RefSeq
Midichloria
mmn
Candidatus Midichloria mitochondrii
2011
RefSeq
Mesorhizobium
mlo
Mesorhizobium loti
2000
RefSeq
mci
Mesorhizobium ciceri
2011
RefSeq
mop
Mesorhizobium opportunistum
2011
RefSeq
Chelativorans
mes
Mesorhizobium sp. BNC1
2006
RefSeq
Parvibaculum
pla
Parvibaculum lavamentivorans
2007
RefSeq
Sinorhizobium
sme
Sinorhizobium meliloti 1021
2001
RefSeq
smk
Sinorhizobium meliloti AK83
2011
RefSeq
smd
Sinorhizobium medicae
2007
RefSeq
rhi
Sinorhizobium fredii NGR234
2009
RefSeq
Agrobacterium
atu
Agrobacterium tumefaciens C58
2001
RefSeq
ara
Agrobacterium radiobacter K84
2009
RefSeq
avi
Agrobacterium vitis S4
2009
RefSeq
agr
Agrobacterium sp. H13-3
2011
RefSeq
Rhizobium
ret
Rhizobium etli CFN 42
2006
RefSeq
rec
Rhizobium etli CIAT 652
2008
RefSeq
rle
Rhizobium leguminosarum
2006
RefSeq
rlt
Rhizobium leguminosarum bv. trifolii WSM2304
2008
RefSeq
rlg
Rhizobium leguminosarum bv. trifolii WSM1325
2009
RefSeq
Liberibacter
las
Candidatus Liberibacter asiaticus
2009
RefSeq
lso
Candidatus Liberibacter solanacearum
2010
RefSeq
Brucella
bme
Brucella melitensis bv. 1 16M
2002
RefSeq
bmi
Brucella melitensis ATCC 23457
2009
RefSeq
bmf
Brucella melitensis biovar Abortus
2005
RefSeq
bmb
Brucella abortus 9-941
2005
RefSeq
bmc
Brucella abortus S19
2008
RefSeq
bms
Brucella suis 1330
2002
RefSeq
bmt
Brucella suis ATCC 23445
2007
RefSeq
bov
Brucella ovis
2007
RefSeq
bcs
Brucella canis
2007
RefSeq
bmr
Brucella microti
2009
RefSeq
bpp
Brucella pinnipedialis
2011
RefSeq
Ochrobactrum
oan
Ochrobactrum anthropi
2007
RefSeq
Bradyrhizobium
bja
Bradyrhizobium japonicum
2002
RefSeq
bra
Bradyrhizobium sp. ORS 278
2007
RefSeq
bbt
Bradyrhizobium sp. BTAi1
2007
RefSeq
Rhodopseudomonas
rpa
Rhodopseudomonas palustris CGA009
2003
RefSeq
rpb
Rhodopseudomonas palustris HaA2
2006
RefSeq
rpc
Rhodopseudomonas palustris BisB18
2006
RefSeq
rpd
Rhodopseudomonas palustris BisB5
2006
RefSeq
rpe
Rhodopseudomonas palustris BisA53
2006
RefSeq
rpt
Rhodopseudomonas palustris TIE-1
2008
RefSeq
rpx
Rhodopseudomonas palustris DX-1
2011
RefSeq
Nitrobacter
nwi
Nitrobacter winogradskyi
2005
RefSeq
nha
Nitrobacter hamburgensis
2006
RefSeq
Oligotropha
oca
Oligotropha carboxidovorans OM5 (Mississippi)
2008
RefSeq
ocg
Oligotropha carboxidovorans OM5 (Goettingen)
2011
RefSeq
Bartonella
bhe
Bartonella henselae
2004
RefSeq
bqu
Bartonella quintana
2004
RefSeq
bbk
Bartonella bacilliformis
2007
RefSeq
btr
Bartonella tribocorum
2007
RefSeq
bgr
Bartonella grahamii
2009
RefSeq
bcd
Bartonella clarridgeiae
2011
RefSeq
Xanthobacter
xau
Xanthobacter autotrophicus
2007
RefSeq
Azorhizobium
azc
Azorhizobium caulinodans
2007
RefSeq
Starkeya
sno
Starkeya novella
2010
RefSeq
Methylobacterium
mex
Methylobacterium extorquens
2007
RefSeq
mea
Methylobacterium extorquens AM1
2009
RefSeq
mdi
Methylobacterium extorquens DM4
2009
RefSeq
mrd
Methylobacterium radiotolerans
2008
RefSeq
met
Methylobacterium sp. 4-46
2008
RefSeq
mpo
Methylobacterium populi
2008
RefSeq
mch
Methylobacterium chloromethanicum
2008
RefSeq
mno
Methylobacterium nodulans
2009
RefSeq
Beijerinckia
bid
Beijerinckia indica
2008
RefSeq
Methylocella
msl
Methylocella silvestris
2008
RefSeq
Hyphomicrobium
hdn
Hyphomicrobium denitrificans
2010
RefSeq
hmc
Hyphomicrobium sp. MC1
2011
RefSeq
Rhodomicrobium
rva
Rhodomicrobium vannielii
2010
RefSeq
Pelagibacterium
phl
Pelagibacterium halotolerans
2011
RefSeq
Hodgkinia
hci
Candidatus Hodgkinia cicadicola
2009
RefSeq
Caulobacter
ccr
Caulobacter crescentus CB15
2001
RefSeq
ccs
Caulobacter crescentus NA1000
2009
RefSeq
cak
Caulobacter sp. K31
2008
RefSeq
cse
Caulobacter segnis
2010
RefSeq
Phenylobacterium
pzu
Phenylobacterium zucineum
2008
RefSeq
Brevundimonas
bsb
Brevundimonas subvibrioides
2010
RefSeq
Asticcacaulis
aex
Asticcacaulis excentricus
2011
RefSeq
Ruegeria
sil
Silicibacter pomeroyi
2004
RefSeq
sit
Ruegeria sp. TM1040
2006
RefSeq
Rhodobacter
rsp
Rhodobacter sphaeroides 2.4.1
2005
RefSeq
rsh
Rhodobacter sphaeroides ATCC 17029
2007
RefSeq
rsq
Rhodobacter sphaeroides ATCC 17025
2007
RefSeq
rsk
Rhodobacter sphaeroides KD131
2009
RefSeq
rcp
Rhodobacter capsulatus
2010
RefSeq
Jannaschia
jan
Jannaschia sp. CCS1
2006
RefSeq
Roseobacter
rde
Roseobacter denitrificans
2006
RefSeq
rli
Roseobacter litoralis Och 149
2011
RefSeq
Paracoccus
pde
Paracoccus denitrificans
2006
RefSeq
Dinoroseobacter
dsh
Dinoroseobacter shibae
2007
RefSeq
Ketogulonicigenium
kvu
Ketogulonicigenium vulgare
2010
RefSeq
Pseudovibrio
psf
Pseudovibrio sp. FO-BEG1
2012
RefSeq
Maricaulis
mmr
Maricaulis maris
2006
RefSeq
Hyphomonas
hne
Hyphomonas neptunium
2006
RefSeq
Hirschia
hba
Hirschia baltica
2009
RefSeq
Zymomonas
zmo
Zymomonas mobilis
2004
RefSeq
zmn
Zymomonas mobilis subsp. mobilis NCIMB 11163
2009
RefSeq
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
2011
RefSeq
Novosphingobium
nar
Novosphingobium aromaticivorans
2006
RefSeq
npp
Novosphingobium sp. PP1Y
2011
RefSeq
Sphingopyxis
sal
Sphingopyxis alaskensis
2006
RefSeq
Sphingomonas
swi
Sphingomonas wittichii
2007
RefSeq
Sphingobium
sjp
Sphingobium japonicum
2010
RefSeq
sch
Sphingobium chlorophenolicum
2011
RefSeq
ssy
Sphingobium sp. SYK-6
2011
RefSeq
Erythrobacter
eli
Erythrobacter litoralis
2006
RefSeq
Gluconobacter
gox
Gluconobacter oxydans
2005
RefSeq
Granulobacter
gbe
Granulibacter bethesdensis
2006
RefSeq
Acidiphilium
acr
Acidiphilium cryptum JF-5
2007
RefSeq
amv
Acidiphilium multivorum
2011
RefSeq
Gluconacetobacter
gdi
Gluconacetobacter diazotrophicus PAl 5 (Brazil)
2007
RefSeq
gdj
Gluconacetobacter diazotrophicus PAl 5 (JGI)
2008
RefSeq
gxy
Gluconacetobacter xylinus
2011
RefSeq
Acetobacter
apt
Acetobacter pasteurianus
2009
RefSeq
Rhodospirillum
rru
Rhodospirillum rubrum
2005
RefSeq
rce
Rhodospirillum centenum
2008
RefSeq
Magnetospirillum
mag
Magnetospirillum magneticum
2005
RefSeq
Azospirillum
azl
Azospirillum sp. B510
2010
RefSeq
ali
Azospirillum lipoferum 4B
2012
RefSeq
Parvularcula
pbr
Parvularcula bermudensis
2010
RefSeq
Puniceispirillum
apb
Candidatus Puniceispirillum marinum
2010
RefSeq
Unclassified Alphaproteobacteria
pgv
Polymorphum gilvum
2011
RefSeq
mai
Micavibrio aeruginosavorus
2011
RefSeq
Other proteobacteria
Magnetococcus
mgm
Magnetococcus sp. MC-1
2006
RefSeq
Chrysiogenetes
Desulfurispirillum
din
Desulfurispirillum indicum
2011
RefSeq
Firmicutes
Bacillus
bsu
Bacillus subtilis
1997
RefSeq
bss
Bacillus subtilis subsp. spizizenii W23
2010
RefSeq
bst
Bacillus subtilis subsp. spizizenii TU-B-10
2011
RefSeq
bsn
Bacillus subtilis BSn5
2011
RefSeq
bha
Bacillus halodurans
2000
RefSeq
ban
Bacillus anthracis Ames
2003
RefSeq
bar
Bacillus anthracis Ames 0581
2004
RefSeq
bat
Bacillus anthracis Sterne
2004
RefSeq
bah
Bacillus anthracis CDC 684
2009
RefSeq
bai
Bacillus anthracis A0248
2009
RefSeq
bal
Bacillus cereus biovar anthracis CI
2010
RefSeq
bce
Bacillus cereus ATCC 14579
2003
RefSeq
bca
Bacillus cereus ATCC 10987
2004
RefSeq
bcz
Bacillus cereus ZK
2004
RefSeq
bcr
Bacillus cereus AH187
2008
RefSeq
bcb
Bacillus cereus B4264
2008
RefSeq
bcu
Bacillus cereus AH820
2009
RefSeq
bcg
Bacillus cereus G9842
2009
RefSeq
bcq
Bacillus cereus Q1
2009
RefSeq
bcx
Bacillus cereus 03BB102
2009
RefSeq
bcy
Bacillus cytotoxicus NVH 391-98
2007
RefSeq
btk
Bacillus thuringiensis 97-27
2004
RefSeq
btl
Bacillus thuringiensis Al Hakam
2006
RefSeq
btb
Bacillus thuringiensis BMB171
2010
RefSeq
bwe
Bacillus weihenstephanensis
2008
RefSeq
bli
Bacillus licheniformis ATCC 14580
2004
RefSeq
bld
Bacillus licheniformis DSM13
2004
RefSeq
bay
Bacillus amyloliquefaciens FZB42
2007
RefSeq
bao
Bacillus amyloliquefaciens DSM 7
2010
RefSeq
bae
Bacillus atrophaeus
2010
RefSeq
bcl
Bacillus clausii
2005
RefSeq
bpu
Bacillus pumilus
2007
RefSeq
bpf
Bacillus pseudofirmus
2010
RefSeq
bmq
Bacillus megaterium QM B1551
2010
RefSeq
bmd
Bacillus megaterium DSM 319
2010
RefSeq
bse
Bacillus selenitireducens
2010
RefSeq
bco
Bacillus cellulosilyticus
2011
RefSeq
bck
Bacillus coagulans
2011
RefSeq
bag
Bacillus coagulans 36D1
2011
RefSeq
Oceanobacillus
oih
Oceanobacillus iheyensis
2002
RefSeq
Geobacillus
gka
Geobacillus kaustophilus
2004
RefSeq
gtn
Geobacillus thermodenitrificans
2007
RefSeq
gth
Geobacillus thermoglucosidasius
2011
RefSeq
gwc
Geobacillus sp. WCH70
2009
RefSeq
gyc
Geobacillus sp. Y412MC61
2009
RefSeq
gya
Geobacillus sp. Y412MC52
2011
RefSeq
gct
Geobacillus sp. C56-T3
2010
RefSeq
gmc
Geobacillus sp. Y4.1MC1
2010
RefSeq
Anoxybacillus
afl
Anoxybacillus flavithermus
2008
RefSeq
Staphylococcus
sau
Staphylococcus aureus N315 (MRSA/VSSA)
2001
RefSeq
sav
Staphylococcus aureus Mu50 (MRSA/VISA)
2001
RefSeq
saw
Staphylococcus aureus Mu3 (MRSA/hetero-VISA)
2007
RefSeq
sah
Staphylococcus aureus JH1 (MRSA/VSSA)
2007
RefSeq
saj
Staphylococcus aureus JH9 (MRSA/VRSA)
2007
RefSeq
sam
Staphylococcus aureus MW2 (CA-MRSA)
2002
RefSeq
sas
Staphylococcus aureus MSSA476 (MSSA)
2004
RefSeq
sar
Staphylococcus aureus MRSA252 (MRSA)
2004
RefSeq
sac
Staphylococcus aureus COL (MRSA)
2005
RefSeq
sax
Staphylococcus aureus USA300_TCH1516 (CA-MSSA)
2007
RefSeq
saa
Staphylococcus aureus USA300_FPR3757 (CA-MRSA)
2006
RefSeq
sao
Staphylococcus aureus NCTC8325
2006
RefSeq
sae
Staphylococcus aureus Newman
2007
RefSeq
sad
Staphylococcus aureus ED98
2009
RefSeq
sab
Staphylococcus aureus RF122
2005
RefSeq
sep
Staphylococcus epidermidis ATCC 12228
2003
RefSeq
ser
Staphylococcus epidermidis RP62A
2005
RefSeq
sha
Staphylococcus haemolyticus
2005
RefSeq
ssp
Staphylococcus saprophyticus
2005
RefSeq
sca
Staphylococcus carnosus
2009
RefSeq
slg
Staphylococcus lugdunensis
2010
RefSeq
ssd
Staphylococcus pseudintermedius
2011
RefSeq
Listeria
lmo
Listeria monocytogenes EGD-e
2001
RefSeq
lmf
Listeria monocytogenes F2365
2004
RefSeq
lmh
Listeria monocytogenes HCC23
2008
RefSeq
lmc
Listeria monocytogenes Clip81459
2009
RefSeq
lmn
Listeria monocytogenes 08-5578
2010
RefSeq
lmy
Listeria monocytogenes 08-5923
2010
RefSeq
lin
Listeria innocua
2001
RefSeq
lwe
Listeria welshimeri SLCC5334
2006
RefSeq
lsg
Listeria seeligeri
2010
RefSeq
liv
Listeria ivanovii
2011
RefSeq
Lysinibacillus
lsp
Lysinibacillus sphaericus
2008
RefSeq
Exiguobacterium
esi
Exiguobacterium sibiricum
2008
RefSeq
eat
Exiguobacterium sp. AT1b
2009
RefSeq
Macrococcus
mcl
Macrococcus caseolyticus
2009
RefSeq
Brevibacillus
bbe
Brevibacillus brevis
2009
RefSeq
Paenibacillus
pjd
Paenibacillus sp. JDR-2
2009
RefSeq
gym
Geobacillus sp. Y412MC10
2009
RefSeq
ppy
Paenibacillus polymyxa E681
2010
RefSeq
ppm
Paenibacillus polymyxa SC2
2010
RefSeq
pms
Paenibacillus mucilaginosus
2011
RefSeq
pta
Paenibacillus terrae
2012
RefSeq
Alicyclobacillus
aac
Alicyclobacillus acidocaldarius
2009
RefSeq
Kyrpidia
bts
Kyrpidia tusciae
2010
RefSeq
Lactococcus
lla
Lactococcus lactis subsp. lactis IL1403
2001
RefSeq
llk
Lactococcus lactis subsp. lactis KF147
2009
RefSeq
llc
Lactococcus lactis subsp. cremoris SK11
2006
RefSeq
llm
Lactococcus lactis subsp. cremoris MG1363
2007
RefSeq
lgr
Lactococcus garvieae
2011
RefSeq
Streptococcus
spy
Streptococcus pyogenes SF370 (serotype M1)
2001
RefSeq
spz
Streptococcus pyogenes MGAS5005 (serotype M1)
2005
RefSeq
spm
Streptococcus pyogenes MGAS8232 (serotype M18)
2002
RefSeq
spg
Streptococcus pyogenes MGAS315 (serotype M3)
2002
RefSeq
sps
Streptococcus pyogenes SSI-1 (serotype M3)
2003
RefSeq
sph
Streptococcus pyogenes MGAS10270 (serotype M2)
2006
RefSeq
spi
Streptococcus pyogenes MGAS10750 (serotype M4)
2006
RefSeq
spj
Streptococcus pyogenes MGAS2096 (serotype M12)
2006
RefSeq
spk
Streptococcus pyogenes MGAS9429 (serotype M12)
2006
RefSeq
spf
Streptococcus pyogenes Manfredo (serotype M5)
2007
RefSeq
spa
Streptococcus pyogenes MGAS10394 (serotype M6)
2004
RefSeq
spb
Streptococcus pyogenes MGAS6180 (serotype M28)
2005
RefSeq
soz
Streptococcus pyogenes NZ131 (serotype M49)
2008
RefSeq
spn
Streptococcus pneumoniae TIGR4 (virulent serotype 4)
2001
RefSeq
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
2006
RefSeq
spr
Streptococcus pneumoniae R6 (avirulent)
2001
RefSeq
spw
Streptococcus pneumoniae CGSP14 (serotype 14)
2008
RefSeq
spx
Streptococcus pneumoniae G54 (serotype 19F)
2008
RefSeq
sne
Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage)
2009
RefSeq
spv
Streptococcus pneumoniae Hungary19A 6
2008
RefSeq
snm
Streptococcus pneumoniae 70585
2009
RefSeq
sjj
Streptococcus pneumoniae JJA
2009
RefSeq
spp
Streptococcus pneumoniae P1031
2009
RefSeq
snt
Streptococcus pneumoniae Taiwan19F-14
2009
RefSeq
snc
Streptococcus pneumoniae TCH8431/19A
2010
RefSeq
snb
Streptococcus pneumoniae 670-6B
2010
RefSeq
snp
Streptococcus pneumoniae AP200
2010
RefSeq
sag
Streptococcus agalactiae 2603 (serotype V)
2002
RefSeq
san
Streptococcus agalactiae NEM316 (serotype III)
2002
RefSeq
sak
Streptococcus agalactiae A909 (serotype Ia)
2005
RefSeq
smu
Streptococcus mutans UA159
2002
RefSeq
smc
Streptococcus mutans NN2025
2010
RefSeq
stc
Streptococcus thermophilus CNRZ1066
2004
RefSeq
stl
Streptococcus thermophilus LMG18311
2004
RefSeq
ste
Streptococcus thermophilus LMD-9
2006
RefSeq
ssa
Streptococcus sanguinis
2007
RefSeq
ssu
Streptococcus suis 05ZYH33
2007
RefSeq
ssv
Streptococcus suis 98HAH33
2007
RefSeq
ssb
Streptococcus suis BM407
2009
RefSeq
ssi
Streptococcus suis P1/7
2009
RefSeq
sss
Streptococcus suis SC84
2009
RefSeq
sst
Streptococcus suis ST3
2011
RefSeq
sgo
Streptococcus gordonii
2007
RefSeq
seq
Streptococcus equi subsp. zooepidemicus H70
2009
RefSeq
sez
Streptococcus equi subsp. zooepidemicus MGCS10565
2008
RefSeq
seu
Streptococcus equi subsp. equi 4047
2009
RefSeq
sub
Streptococcus uberis
2009
RefSeq
sds
Streptococcus dysgalactiae
2009
RefSeq
sga
Streptococcus gallolyticus UCN34
2010
RefSeq
sgg
Streptococcus gallolyticus subsp. gallolyticus
2011
RefSeq
smb
Streptococcus mitis B6
2010
RefSeq
sor
Streptococcus oralis
2011
RefSeq
stk
Streptococcus parauberis
2011
RefSeq
stb
Streptococcus pasteurianus
2011
RefSeq
scp
Streptococcus parasanguinis
2011
RefSeq
ssr
Streptococcus salivarius
2011
RefSeq
std
Streptococcus pseudopneumoniae
2011
RefSeq
smn
Streptococcus macedonicus
2012
RefSeq
Lactobacillus
lpl
Lactobacillus plantarum WCFS1
2003
RefSeq
lpj
Lactobacillus plantarum JDM1
2009
RefSeq
lps
Lactobacillus plantarum subsp. plantarum ST-III
2010
RefSeq
ljo
Lactobacillus johnsonii NCC 533
2004
RefSeq
ljf
Lactobacillus johnsonii FI9785
2009
RefSeq
lac
Lactobacillus acidophilus NCFM
2005
RefSeq
lai
Lactobacillus acidophilus 30SC
2011
RefSeq
lsa
Lactobacillus sakei
2005
RefSeq
lsl
Lactobacillus salivarius
2006
RefSeq
ldb
Lactobacillus delbrueckii ATCC 11842
2006
RefSeq
lbu
Lactobacillus delbrueckii ATCC BAA-365
2006
RefSeq
lde
Lactobacillus delbrueckii subsp. bulgaricus ND02
2010
RefSeq
lbr
Lactobacillus brevis
2006
RefSeq
lca
Lactobacillus casei ATCC 334
2006
RefSeq
lcb
Lactobacillus casei BL23
2008
RefSeq
lcz
Lactobacillus casei Zhang
2010
RefSeq
lga
Lactobacillus gasseri
2006
RefSeq
lre
Lactobacillus reuteri DSM 20016
2007
RefSeq
lrf
Lactobacillus reuteri JCM 1112
2008
RefSeq
lru
Lactobacillus reuteri SD2112
2011
RefSeq
lhe
Lactobacillus helveticus
2007
RefSeq
lfe
Lactobacillus fermentum
2008
RefSeq
lrh
Lactobacillus rhamnosus GG
2009
RefSeq
lrl
Lactobacillus rhamnosus Lc 705
2009
RefSeq
lcr
Lactobacillus crispatus
2010
RefSeq
lam
Lactobacillus amylovorus
2010
RefSeq
lbh
Lactobacillus buchneri
2011
RefSeq
lke
Lactobacillus kefiranofaciens
2011
RefSeq
lrm
Lactobacillus ruminis
2011
RefSeq
lsn
Lactobacillus sanfranciscensis
2011
RefSeq
Pediococcus
ppe
Pediococcus pentosaceus
2006
RefSeq
Enterococcus
efa
Enterococcus faecalis
2003
RefSeq
Melissococcus
mps
Melissococcus plutonius
2011
RefSeq
Tetragenococcus
thl
Tetragenococcus halophilus
2011
RefSeq
Oenococcus
ooe
Oenococcus oeni
2006
RefSeq
Leuconostoc
lme
Leuconostoc mesenteroides
2006
RefSeq
lci
Leuconostoc citreum
2008
RefSeq
lki
Leuconostoc kimchii
2010
RefSeq
lgs
Leuconostoc gasicomitatum
2010
RefSeq
lec
Leuconostoc sp. C2
2011
RefSeq
Aerococcus
aur
Aerococcus urinae
2011
RefSeq
Carnobacterium
crn
Carnobacterium sp. 17-4
2011
RefSeq
Weissella
wko
Weissella koreensis
2011
RefSeq
Clostridium
cac
Clostridium acetobutylicum ATCC 824
2001
RefSeq
cae
Clostridium acetobutylicum DSM 1731
2011
RefSeq
cpe
Clostridium perfringens 13
2002
RefSeq
cpf
Clostridium perfringens ATCC 13124
2006
RefSeq
cpr
Clostridium perfringens SM101
2006
RefSeq
ctc
Clostridium tetani E88
2003
RefSeq
cno
Clostridium novyi
2006
RefSeq
cth
Clostridium thermocellum
2007
RefSeq
cdf
Clostridium difficile 630
2007
RefSeq
cdc
Clostridium difficile CD196
2009
RefSeq
cdl
Clostridium difficile R20291
2009
RefSeq
cbo
Clostridium botulinum A ATCC 3502
2007
RefSeq
cba
Clostridium botulinum A ATCC 19397
2007
RefSeq
cbh
Clostridium botulinum A Hall
2007
RefSeq
cby
Clostridium botulinum A2
2009
RefSeq
cbl
Clostridium botulinum A3 Loch Maree
2008
RefSeq
cbk
Clostridium botulinum B Eklund 17B
2008
RefSeq
cbb
Clostridium botulinum B1 Okra
2008
RefSeq
cbi
Clostridium botulinum Ba4
2009
RefSeq
cbn
Clostridium botulinum BKT015925
2011
RefSeq
cbt
Clostridium botulinum E3
2008
RefSeq
cbf
Clostridium botulinum F Langeland
2007
RefSeq
cbe
Clostridium beijerinckii
2007
RefSeq
ckl
Clostridium kluyveri DSM 555
2007
RefSeq
ckr
Clostridium kluyveri NBRC 12016
2009
RefSeq
cpy
Clostridium phytofermentans
2007
RefSeq
cce
Clostridium cellulolyticum
2009
RefSeq
clj
Clostridium ljungdahlii
2010
RefSeq
csh
Clostridium saccharolyticum
2010
RefSeq
ccb
Clostridium cellulovorans
2010
RefSeq
cst
Clostridium sticklandii
2010
RefSeq
cls
Clostridium sp. SY8519
2011
RefSeq
ccl
Clostridium clariflavum DSM 19732
2012
RefSeq
Alkaliphilus
amt
Alkaliphilus metalliredigens
2007
RefSeq
aoe
Alkaliphilus oremlandii
2007
RefSeq
Arthromitus
asf
Candidatus Arthromitus sp. SFB-mouse-Japan
2011
RefSeq
asb
Candidatus Arthromitus sp. SFB-rat-Yit
2011
RefSeq
Symbiobacterium
sth
Symbiobacterium thermophilum
2004
RefSeq
Syntrophomonas
swo
Syntrophomonas wolfei
2006
RefSeq
Syntrophothermus
slp
Syntrophothermus lipocalidus
2010
RefSeq
Desulfitobacterium
dsy
Desulfitobacterium hafniense Y51
2006
RefSeq
dhd
Desulfitobacterium hafniense DCB-2
2009
RefSeq
Desulfotomaculum
drm
Desulfotomaculum reducens
2007
RefSeq
dae
Desulfotomaculum acetoxidans
2009
RefSeq
dca
Desulfotomaculum carboxydivorans
2011
RefSeq
dku
Desulfotomaculum kuznetsovii
2011
RefSeq
dru
Desulfotomaculum ruminis
2011
RefSeq
Pelotomaculum
pth
Pelotomaculum thermopropionicum
2007
RefSeq
Desulforudis
dau
Candidatus Desulforudis audaxviator
2008
RefSeq
Thermincola
tjr
Thermincola potens JR
2010
RefSeq
Syntrophobotulus
sgy
Syntrophobotulus glycolicus
2011
RefSeq
Heliobacterium
hmo
Heliobacterium modesticaldum
2008
RefSeq
Finegoldia
fma
Finegoldia magna
2008
RefSeq
Anaerococcus
apr
Anaerococcus prevotii
2009
RefSeq
Eubacterium
eel
Eubacterium eligens
2009
RefSeq
ere
Eubacterium rectale
2009
RefSeq
elm
Eubacterium limosum
2010
RefSeq
Butyrivibrio
bpb
Butyrivibrio proteoclasticus
2010
RefSeq
Cellulosilyticum
cle
Clostridium lentocellum
2011
RefSeq
Roseburia
rho
Roseburia hominis
2011
RefSeq
Ethanoligenens
eha
Ethanoligenens harbinense
2011
RefSeq
Ruminococcus
ral
Ruminococcus albus
2011
RefSeq
Oscillibacter
ova
Oscillibacter valericigenes
2011
RefSeq
Thermaerobacter
tmr
Thermaerobacter marianensis
2011
RefSeq
Sulfobacillus
say
Sulfobacillus acidophilus
2011
RefSeq
Filifactor
faa
Filifactor alocis
2012
RefSeq
Unclassified Clostridiales
clo
Clostridiales genomosp. BVAB3
2010
RefSeq
Thermoanaerobacter
tte
Thermoanaerobacter tengcongensis
2002
RefSeq
tex
Thermoanaerobacter sp. X514
2008
RefSeq
thx
Thermoanaerobacter sp. X513
2010
RefSeq
tpd
Thermoanaerobacter pseudethanolicus
2008
RefSeq
tit
Thermoanaerobacter italicus
2010
RefSeq
tmt
Thermoanaerobacter mathranii
2010
RefSeq
tbo
Thermoanaerobacter brockii
2011
RefSeq
twi
Thermoanaerobacter wiegelii
2011
RefSeq
Carboxydothermus
chy
Carboxydothermus hydrogenoformans
2005
RefSeq
Tepidanaerobacter
tep
Tepidanaerobacter sp. Re1
2011
RefSeq
Moorella
mta
Moorella thermoacetica
2005
RefSeq
Ammonifex
adg
Ammonifex degensii
2009
RefSeq
Caldicellulosiruptor
csc
Caldicellulosiruptor saccharolyticus
2007
RefSeq
ate
Caldicellulosiruptor bescii
2009
RefSeq
cob
Caldicellulosiruptor obsidiansis
2010
RefSeq
chd
Caldicellulosiruptor hydrothermalis
2010
RefSeq
cow
Caldicellulosiruptor owensensis
2010
RefSeq
cki
Caldicellulosiruptor kristjanssonii
2010
RefSeq
ckn
Caldicellulosiruptor kronotskyensis
2010
RefSeq
clc
Caldicellulosiruptor lactoaceticus
2011
RefSeq
Thermosediminibacter
toc
Thermosediminibacter oceani
2010
RefSeq
Thermoanaerobacterium
ttm
Thermoanaerobacterium thermosaccharolyticum
2010
RefSeq
txy
Thermoanaerobacterium xylanolyticum
2011
RefSeq
Coprothermobacter
cpo
Coprothermobacter proteolyticus
2008
RefSeq
Thermodesulfobium
tnr
Thermodesulfobium narugense
2011
RefSeq
Mahella
mas
Mahella australiensis
2011
RefSeq
Natranaerobius
nth
Natranaerobius thermophilus
2008
RefSeq
Halothermothrix
hor
Halothermothrix orenii
2009
RefSeq
Halanaerobium
has
Halanaerobium hydrogeniformans
2010
RefSeq
Acetohalobium
aar
Acetohalobium arabaticum
2010
RefSeq
Veillonella
vpr
Veillonella parvula
2009
RefSeq
Selenomonas
ssg
Selenomonas sputigena
2011
RefSeq
Megasphaera
med
Megasphaera elsdenii
2011
RefSeq
Acidaminococcus
afn
Acidaminococcus fermentans
2010
RefSeq
ain
Acidaminococcus intestini
2011
RefSeq
Erysipelothrix
erh
Erysipelothrix rhusiopathiae
2011
RefSeq
Tenericutes
Mycoplasma
mge
Mycoplasma genitalium
1995
RefSeq
mpn
Mycoplasma pneumoniae
1997
RefSeq
mpu
Mycoplasma pulmonis
2001
RefSeq
mpe
Mycoplasma penetrans
2002
RefSeq
mga
Mycoplasma gallisepticum
2003
RefSeq
mmy
Mycoplasma mycoides subsp. mycoides SC PG1
2004
RefSeq
mml
Mycoplasma mycoides subsp. capri LC 95010
2011
RefSeq
mmo
Mycoplasma mobile
2004
RefSeq
mhy
Mycoplasma hyopneumoniae 232
2004
RefSeq
mhj
Mycoplasma hyopneumoniae J
2005
RefSeq
mhp
Mycoplasma hyopneumoniae 7448
2005
RefSeq
msy
Mycoplasma synoviae
2005
RefSeq
mcp
Mycoplasma capricolum
2005
RefSeq
maa
Mycoplasma agalactiae PG2
2007
RefSeq
mal
Mycoplasma agalactiae 5632
2010
RefSeq
mat
Mycoplasma arthritidis
2008
RefSeq
mco
Mycoplasma conjunctivae
2009
RefSeq
mho
Mycoplasma hominis
2009
RefSeq
mcd
Mycoplasma crocodyli
2010
RefSeq
mhr
Mycoplasma hyorhinis
2010
RefSeq
mfr
Mycoplasma fermentans JER
2010
RefSeq
mfm
Mycoplasma fermentans M64
2011
RefSeq
mbv
Mycoplasma bovis PG45
2010
RefSeq
mbh
Mycoplasma bovis Hubei-1
2011
RefSeq
mlc
Mycoplasma leachii
2010
RefSeq
mha
Mycoplasma haemofelis
2011
RefSeq
mss
Mycoplasma suis Illinois
2011
RefSeq
msk
Mycoplasma suis KI3806
2011
RefSeq
mpf
Mycoplasma putrefaciens
2011
RefSeq
mhe
Mycoplasma haemocanis
2012
RefSeq
Ureaplasma
uur
Ureaplasma parvum serovar 3 ATCC 700970
2000
RefSeq
upa
Ureaplasma parvum serovar 3 ATCC 27815
2008
RefSeq
uue
Ureaplasma urealyticum serovar 10 ATCC 33699
2008
RefSeq
Phytoplasma
poy
Phytoplasma OY
2003
RefSeq
ayw
Phytoplasma AYWB
2006
RefSeq
pml
Candidatus Phytoplasma mali
2008
RefSeq
pal
Candidatus Phytoplasma australiense
2008
RefSeq
Acholeplasma
acl
Acholeplasma laidlawii
2008
RefSeq
Mesoplasma
mfl
Mesoplasma florum
2004
RefSeq
Actinobacteria
Mycobacterium
mtu
Mycobacterium tuberculosis H37Rv
1998
RefSeq
mtc
Mycobacterium tuberculosis CDC1551
2001
RefSeq
mra
Mycobacterium tuberculosis H37Ra
2007
RefSeq
mtf
Mycobacterium tuberculosis F11
2007
RefSeq
mtb
Mycobacterium tuberculosis KZN 1435
2009
RefSeq
mbo
Mycobacterium bovis AF2122/97
2003
RefSeq
mbb
Mycobacterium bovis BCG Pasteur 1173P2
2007
RefSeq
mbt
Mycobacterium bovis BCG Tokyo 172
2009
RefSeq
maf
Mycobacterium africanum
2011
RefSeq
mce
Mycobacterium canettii
2011
RefSeq
mle
Mycobacterium leprae TN
2001
RefSeq
mlb
Mycobacterium leprae Br4923
2009
RefSeq
mpa
Mycobacterium avium paratuberculosis
2004
RefSeq
mav
Mycobacterium avium 104
2006
RefSeq
msm
Mycobacterium smegmatis
2006
RefSeq
mul
Mycobacterium ulcerans
2006
RefSeq
mva
Mycobacterium vanbaalenii
2006
RefSeq
mgi
Mycobacterium gilvum
2007
RefSeq
mab
Mycobacterium abscessus ATCC 19977
2008
RefSeq
mmc
Mycobacterium sp. MCS
2006
RefSeq
mkm
Mycobacterium sp. KMS
2006
RefSeq
mjl
Mycobacterium sp. JLS
2007
RefSeq
msp
Mycobacterium sp. Spyr1
2010
RefSeq
mjd
Mycobacterium sp. JDM601
2011
RefSeq
mmi
Mycobacterium marinum M
2008
RefSeq
Amycolicicoccus
asd
Amycolicicoccus subflavus
2011
RefSeq
Corynebacterium
cgl
Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko)
2002
RefSeq
cgb
Corynebacterium glutamicum ATCC 13032 (Bielefeld)
2005
RefSeq
cgt
Corynebacterium glutamicum R
2007
RefSeq
cef
Corynebacterium efficiens
2002
RefSeq
cdi
Corynebacterium diphtheriae
2003
RefSeq
cjk
Corynebacterium jeikeium
2005
RefSeq
cur
Corynebacterium urealyticum
2008
RefSeq
car
Corynebacterium aurimucosum
2009
RefSeq
ckp
Corynebacterium kroppenstedtii
2009
RefSeq
cpu
Corynebacterium pseudotuberculosis
2010
RefSeq
crd
Corynebacterium resistens
2011
RefSeq
cul
Corynebacterium ulcerans
2011
RefSeq
cva
Corynebacterium variabile
2011
RefSeq
Nocardia
nfa
Nocardia farcinica
2004
RefSeq
Rhodococcus
rha
Rhodococcus sp. RHA1
2006
RefSeq
rer
Rhodococcus erythropolis
2009
RefSeq
rop
Rhodococcus opacus
2009
RefSeq
req
Rhodococcus equi
2010
RefSeq
Gordonia
gbr
Gordonia bronchialis
2009
RefSeq
Tsukamurella
tpr
Tsukamurella paurometabola
2010
RefSeq
Segniliparus
srt
Segniliparus rotundus
2010
RefSeq
Streptomyces
sco
Streptomyces coelicolor
2002
RefSeq
sma
Streptomyces avermitilis
2003
RefSeq
sgr
Streptomyces griseus
2008
RefSeq
scb
Streptomyces scabiei
2010
RefSeq
ssx
Streptomyces sp. SirexAA-E
2011
RefSeq
svl
Streptomyces violaceusniger
2011
RefSeq
sct
Streptomyces cattleya
2011
RefSeq
sfa
Streptomyces flavogriseus
2011
RefSeq
Kitasatospora
ksk
Kitasatospora setae
2011
RefSeq
Tropheryma
twh
Tropheryma whipplei Twist
2003
RefSeq
tws
Tropheryma whipplei TW08/27
2003
RefSeq
Leifsonia
lxx
Leifsonia xyli xyli CTCB07
2004
RefSeq
Clavibacter
cmi
Clavibacter michiganensis subsp. michiganensis
2007
RefSeq
cms
Clavibacter michiganensis subsp. sepedonicus
2008
RefSeq
Microbacterium
mts
Microbacterium testaceum
2011
RefSeq
Arthrobacter
art
Arthrobacter sp. FB24
2006
RefSeq
aau
Arthrobacter aurescens
2006
RefSeq
ach
Arthrobacter chlorophenolicus
2009
RefSeq
aai
Arthrobacter arilaitensis
2010
RefSeq
apn
Arthrobacter phenanthrenivorans
2011
RefSeq
Renibacterium
rsa
Renibacterium salmoninarum
2007
RefSeq
Kocuria
krh
Kocuria rhizophila
2008
RefSeq
Micrococcus
mlu
Micrococcus luteus
2009
RefSeq
Rothia
rmu
Rothia mucilaginosa
2010
RefSeq
rdn
Rothia dentocariosa
2010
RefSeq
Beutenbergia
bcv
Beutenbergia cavernae
2009
RefSeq
Brachybacterium
bfa
Brachybacterium faecium
2009
RefSeq
Jonesia
jde
Jonesia denitrificans
2009
RefSeq
Kytococcus
kse
Kytococcus sedentarius
2009
RefSeq
Xylanimonas
xce
Xylanimonas cellulosilytica
2009
RefSeq
Isoptericola
iva
Isoptericola variabilis
2011
RefSeq
Sanguibacter
ske
Sanguibacter keddieii
2010
RefSeq
Cellulomonas
cfl
Cellulomonas flavigena
2010
RefSeq
cfi
Cellulomonas fimi
2011
RefSeq
Intrasporangium
ica
Intrasporangium calvum
2011
RefSeq
Propionibacterium
pac
Propionibacterium acnes KPA171202
2004
RefSeq
pak
Propionibacterium acnes SK137
2010
RefSeq
pav
Propionibacterium acnes TypeIA2 P.acn17
2012
RefSeq
pax
Propionibacterium acnes TypeIA2 P.acn31
2012
RefSeq
paz
Propionibacterium acnes TypeIA2 P.acn33
2012
RefSeq
pfr
Propionibacterium freudenreichii
2010
RefSeq
Microlunatus
mph
Microlunatus phosphovorus
2011
RefSeq
Nocardioides
nca
Nocardioides sp. JS614
2006
RefSeq
Kribbella
kfl
Kribbella flavida
2010