Search common motifs in selected sequences
Motifs :
pf:CHASE3
(11)
CHASE3 domain
pf:Crp
(2)
Bacterial regulatory proteins, crp family
pf:DUF1492
(8)
Protein of unknown function (DUF1492)
pf:DUF1804
(1)
Protein of unknown function (DUF1804)
pf:DUF2089
(2)
Protein of unknown function (DUF2089)
pf:DUF3489
(2)
Protein of unknown function (DUF3489)
pf:DUF434
(1)
Protein of unknown function (DUF434)
pf:DUF6115
(2)
pf:DUF6362
(3)
pf:GerE
(99)
Bacterial regulatory proteins, luxR family
pf:Glyco_transf_9
(1)
Glycosyltransferase family 9 (heptosyltransferase)
pf:GntR
(4)
Bacterial regulatory proteins, gntR family
pf:HTH_10
(57)
HTH DNA binding domain
pf:HTH_11
(86)
HTH domain
pf:HTH_17
(16)
Helix-turn-helix domain
pf:HTH_20
(76)
Helix-turn-helix domain
pf:HTH_22
(1)
HTH domain
pf:HTH_23
(101)
Homeodomain-like domain
pf:HTH_24
(99)
Winged helix-turn-helix DNA-binding
pf:HTH_26
(3)
Cro/C1-type HTH DNA-binding domain
pf:HTH_28
(77)
Helix-turn-helix domain
pf:HTH_29
(54)
Winged helix-turn helix
pf:HTH_3
(30)
Helix-turn-helix
pf:HTH_31
(22)
Helix-turn-helix domain
pf:HTH_32
(1)
Homeodomain-like domain
pf:HTH_36
(20)
Helix-turn-helix domain
pf:HTH_38
(63)
Helix-turn-helix domain
pf:HTH_40
(89)
Helix-turn-helix domain
pf:HTH_5
(49)
Bacterial regulatory protein, arsR family
pf:HTH_7
(63)
Helix-turn-helix domain of resolvase
pf:HTH_AsnC-type
(8)
AsnC-type helix-turn-helix domain
pf:HTH_Crp_2
(24)
Crp-like helix-turn-helix domain
pf:HTH_DeoR
(11)
DeoR-like helix-turn-helix domain
pf:HTH_IclR
(69)
IclR helix-turn-helix domain
pf:HTH_Tnp_4
(4)
Helix-turn-helix of DDE superfamily endonuclease
pf:HTH_Tnp_IS1
(1)
InsA C-terminal domain
pf:HTH_Tnp_ISL3
(30)
Helix-turn-helix domain of transposase family ISL3
pf:KorB
(10)
KorB domain
pf:LacI
(20)
Bacterial regulatory proteins, lacI family
pf:MarR
(23)
MarR family
pf:MarR_2
(22)
MarR family
pf:Phage_NinH
(11)
Phage NinH protein
pf:Phage_terminase
(2)
Phage terminase small subunit
pf:PhyR_sigma-like
(60)
pf:RWP-RK
(20)
RWP-RK domain
pf:Rv2175c_wHTH
(10)
pf:Sigma70_ECF
(101)
ECF sigma factor
pf:Sigma70_r2
(101)
Sigma-70 region 2
pf:Sigma70_r3
(3)
Sigma-70 region 3
pf:Sigma70_r4
(101)
Sigma-70, region 4
pf:Sigma70_r4_2
(101)
Sigma-70, region 4
pf:Terminase_5
(3)
Putative ATPase subunit of terminase (gpP-like)
pf:TetR_N
(10)
Bacterial regulatory proteins, tetR family
pf:TnsD
(91)
Tn7-like transposition protein D
pf:Trp_repressor
(52)
Trp repressor protein
pf:UCH
(1)
Ubiquitin carboxyl-terminal hydrolase
pf:VHL_C
(1)
VHL box domain
pf:Xre-like-HTH
(64)