Search common motifs in selected sequences


  
Motifs : pf:ADK_lidAdenylate kinase, active site lid
 pf:Abp2ARS binding protein 2
 pf:Anti-TRAPTryptophan RNA-binding attenuator protein inhibitory protein
 pf:C1_1Phorbol esters/diacylglycerol binding domain (C1 domain)
 pf:CPxCG_zf
 pf:Cas_CXXC_CXXCCRISPR-associated protein (Cas_CXXC_CXXC)
 pf:ComJCompetence protein J (ComJ)
 pf:CpXCCpXC protein
 pf:Cys_rich_KTRCysteine-rich KTR
 pf:Cytochrom_CIIIClass III cytochrome C family
 pf:Cytochrome_C7Cytochrome c7 and related cytochrome c
 pf:DDE_Tnp_IS1595ISXO2-like transposase domain
 pf:DFF-CDNA Fragmentation factor 45kDa, C terminal domain
 pf:DNA_RNApol_7kDDNA directed RNA polymerase, 7 kDa subunit
 pf:DUF1281_C
 pf:DUF2089Protein of unknown function (DUF2089)
 pf:DUF2387Probable metal-binding protein (DUF2387)
 pf:DUF2752Protein of unknown function (DUF2752)
 pf:DUF4156Domain of unknown function (DUF4156)
 pf:DUF4428Domain of unknown function (DUF4428)
 pf:DUF5816
 pf:DZRDouble zinc ribbon
 pf:DZR_2
 pf:DpnIDam-replacing family
 pf:ENOD93Early nodulin 93 ENOD93 protein
 pf:Elf1Transcription elongation factor Elf1 like
 pf:Fe_dep_repressIron dependent repressor, N-terminal DNA binding domain
 pf:FrhB_FdhB_CCoenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
 pf:FtsK_gamma
 pf:GYF_2
 pf:Glyco_transf_24
 pf:HTH_11HTH domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_24Winged helix-turn-helix DNA-binding
 pf:HTH_Tnp_1Transposase
 pf:HTH_microHTH-like
 pf:HVO_2753_ZBP
 pf:HscB_4_cys
 pf:Hydant_A_C
 pf:HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA
 pf:Jiv90Cleavage inducing molecular chaperone
 pf:KORATrfB plasmid transcriptional repressor
 pf:Lar_restr_allevRestriction alleviation protein Lar
 pf:NADH_Oxid_Nqo15NADH-quinone oxidoreductase chain 15
 pf:Nairovirus_NSm
 pf:Opy2Opy2 protein
 pf:OrfB_Zn_ribbonPutative transposase DNA-binding domain
 pf:Prim_Zn_RibbonZinc-binding domain of primase-helicase
 pf:QueG_DUF1730
 pf:RNA_POL_M_15KDRNA polymerases M/15 Kd subunit
 pf:RNaseH_likeRibonuclease H-like
 pf:Ribosomal_L37aeRibosomal L37ae protein family
 pf:RubredoxinRubredoxin
 pf:Rubredoxin_2
 pf:SGSH_C
 pf:Sgf11Sgf11 (transcriptional regulation protein)
 pf:TA0956Thermoplasma acidophilum protein TA0956
 pf:TFIIS_CTranscription factor S-II (TFIIS)
 pf:TP2Nuclear transition protein 2
 pf:Tmemb_55ATransmembrane protein 55A
 pf:UreE_CUreE urease accessory protein, C-terminal domain
 pf:VSPGiardia variant-specific surface protein
 pf:YjdM_Zn_Ribbon
 pf:ZF-HD_dimerZF-HD protein dimerisation region
 pf:Zn-ribbon_8Zinc ribbon domain
 pf:Zn_Tnp_IS1595Transposase zinc-ribbon domain
 pf:Zn_Tnp_IS91Transposase zinc-binding domain
 pf:Zn_ribbon_SprT
 pf:Zn_ribbon_recomRecombinase zinc beta ribbon domain
 pf:zf-BEDBED zinc finger
 pf:zf-C2H2_10C2H2 zinc-finger
 pf:zf-DNA_PolDNA Polymerase alpha zinc finger
 pf:zf-LITAF-likeLITAF-like zinc ribbon domain
 pf:zf-RRN7Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
 pf:zf-Sec23_Sec24Sec23/Sec24 zinc finger
 pf:zf-TFIIBTranscription factor zinc-finger
 pf:zf_Rg

aaeo:BJI67_06500 pf:Zn_Tnp_IS1595 pf:Elf1 pf:zf-TFIIB pf:Lar_restr_allev pf:HTH_23 pf:DDE_Tnp_IS1595

aciy:MQE22_13120 pf:Zn_Tnp_IS1595 pf:TFIIS_C pf:YjdM_Zn_Ribbon pf:OrfB_Zn_ribbon pf:Fe_dep_repress pf:HTH_24 pf:DDE_Tnp_IS1595

acu:Atc_0493 pf:Zn_Tnp_IS1595 pf:TFIIS_C pf:YjdM_Zn_Ribbon pf:Fe_dep_repress pf:HTH_24 pf:DDE_Tnp_IS1595

acur:JZ785_03025 pf:Zn_Tnp_IS1595 pf:Elf1 pf:TFIIS_C pf:HTH_23 pf:HTH_11 pf:HTH_micro pf:DDE_Tnp_IS1595

acyc:JI721_03185 pf:Zn_Tnp_IS1595 pf:DUF4428 pf:Elf1 pf:TFIIS_C pf:zf-DNA_Pol pf:CpXC pf:CPxCG_zf pf:Sgf11 pf:DUF2089 pf:DDE_Tnp_IS1595

acz:Acaty_c0211 pf:Zn_Tnp_IS1595 pf:TFIIS_C pf:YjdM_Zn_Ribbon pf:Fe_dep_repress pf:HTH_24 pf:DDE_Tnp_IS1595

aea:C2U39_02050 pf:Zn_Tnp_IS1595 pf:DUF4428 pf:Ribosomal_L37ae pf:DDE_Tnp_IS1595 pf:ComJ pf:DUF4156 pf:UreE_C

aeo:O23A_p0445 pf:Zn_Tnp_IS1595 pf:DUF4428 pf:Ribosomal_L37ae pf:DDE_Tnp_IS1595 pf:ComJ pf:DUF4156 pf:UreE_C

aes:C2U30_22225 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:UreE_C

afe:Lferr_2077 pf:DDE_Tnp_IS1595

afx:JZ786_19975 pf:Zn_Tnp_IS1595 pf:Elf1 pf:TFIIS_C pf:CpXC pf:DUF2089 pf:HTH_11 pf:HTH_micro pf:DDE_Tnp_IS1595

afy:BW247_12280 pf:DDE_Tnp_IS1595

amed:B224_2820 pf:Zn_Tnp_IS1595 pf:DUF4428 pf:Ribosomal_L37ae pf:DDE_Tnp_IS1595 pf:ComJ pf:DUF4156 pf:UreE_C

amv:ACMV_19410 pf:Zn_Tnp_IS1595 pf:DZR_2 pf:zf_Rg pf:OrfB_Zn_ribbon pf:DDE_Tnp_IS1595 pf:Hydant_A_C

app:CAP2UW1_3876 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

arad:KI609_08650 pf:Zn_Tnp_IS1595 pf:ZF-HD_dimer pf:Glyco_transf_24 pf:HTH_11 pf:DDE_Tnp_IS1595

asaa:KXJ75_19010 pf:Zn_Tnp_IS1595 pf:DUF4428 pf:DDE_Tnp_IS1595 pf:DUF4156 pf:UreE_C

atep:Atep_14970 pf:Zn_Tnp_IS1595 pf:HypA pf:Elf1 pf:Zn-ribbon_8 pf:OrfB_Zn_ribbon pf:zf-TFIIB pf:DNA_RNApol_7kD pf:HTH_11 pf:DDE_Tnp_IS1595

awd:AWOD_II_0868 pf:Zn_Tnp_IS1595 pf:Zn_Tnp_IS91 pf:HTH_23 pf:HTH_24 pf:HTH_11 pf:DDE_Tnp_IS1595

boz:DBV39_02230 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

btd:BTI_2209 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:zf-TFIIB pf:HTH_11 pf:DFF-C pf:DDE_Tnp_IS1595

dcb:C3Y92_00460 pf:Zn_Tnp_IS1595 pf:YjdM_Zn_Ribbon pf:DDE_Tnp_IS1595

ddu:GF1_25230 pf:Zn_Tnp_IS1595 pf:HypA pf:DZR pf:Rubredoxin pf:HscB_4_cys pf:OrfB_Zn_ribbon pf:HTH_11 pf:DDE_Tnp_IS1595

ddz:DSYM_01700 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:HVO_2753_ZBP pf:Elf1 pf:ADK_lid pf:Zn_ribbon_recom pf:zf-TFIIB pf:DDE_Tnp_IS1595

deu:DBW_0341 pf:DpnI pf:Zn_Tnp_IS1595 pf:DUF2752 pf:zf-TFIIB pf:DDE_Tnp_IS1595 pf:ENOD93

doe:DENOEST_2739 pf:Ribosomal_L37ae pf:OrfB_Zn_ribbon pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:NADH_Oxid_Nqo15

eff:skT53_08160 pf:Zn_Tnp_IS1595 pf:Cytochrome_C7 pf:Cytochrom_CIII pf:DDE_Tnp_IS1595

enw:MJO57_00870 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:Abp2

gbi:PG2T_06155 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

glo:Glov_0915 pf:DpnI pf:Zn_Tnp_IS1595 pf:zf-TFIIB pf:RNA_POL_M_15KD pf:CpXC pf:DDE_Tnp_IS1595

gps:C427_0365 pf:Zn_Tnp_IS1595 pf:HypA pf:Jiv90 pf:Tmemb_55A pf:Zn_ribbon_SprT pf:OrfB_Zn_ribbon pf:DDE_Tnp_IS1595

gsb:GSUB_09325 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

gur:Gura_0069 pf:Zn_Tnp_IS1595 pf:Elf1 pf:DDE_Tnp_IS1595

hch:HCH_01459 pf:Zn_Tnp_IS1595 pf:Elf1 pf:Opy2 pf:DDE_Tnp_IS1595 pf:TA0956

hpis:P1P91_12725 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:HypA pf:zf-RRN7 pf:HVO_2753_ZBP pf:HTH_23 pf:HTH_11 pf:HTH_24 pf:DDE_Tnp_IS1595

ifl:C1H71_03905 pf:Zn_Tnp_IS1595 pf:Ribosomal_L37ae pf:zf-TFIIB pf:CpXC pf:DDE_Tnp_IS1595

kpz:KPNIH27_28385 pf:Zn_Tnp_IS1595 pf:DUF4428 pf:Ribosomal_L37ae pf:DDE_Tnp_IS1595 pf:ComJ pf:DUF4156

leg:ABH19_04190 pf:Zn_Tnp_IS1595 pf:zf-RRN7 pf:DUF5816 pf:Opy2 pf:DDE_Tnp_IS1595

lfi:LFML04_1799 pf:Zn_Tnp_IS1595 pf:HTH_Tnp_1 pf:DDE_Tnp_IS1595

lpro:PQO03_02105 pf:Zn_Tnp_IS1595 pf:CpXC pf:DDE_Tnp_IS1595

mah:MEALZ_2261 pf:Zn_Tnp_IS1595 pf:C1_1 pf:Elf1 pf:Zn_ribbon_SprT pf:CPxCG_zf pf:DDE_Tnp_IS1595

mbur:EQU24_20190 pf:Zn_Tnp_IS1595 pf:C1_1 pf:Elf1 pf:Zn_ribbon_SprT pf:CPxCG_zf pf:DDE_Tnp_IS1595

mdh:AYM39_08720 pf:Zn_Tnp_IS1595 pf:Cas_CXXC_CXXC pf:DDE_Tnp_IS1595

mell:IVG45_02395 pf:Zn_Tnp_IS1595 pf:DUF2387 pf:DDE_Tnp_IS1595

mesl:KKZ03_06170 pf:Zn_Tnp_IS1595 pf:Nairovirus_NSm pf:zf-C2H2_10 pf:DDE_Tnp_IS1595

mict:FIU95_15420 pf:Zn_Tnp_IS1595 pf:HTH_24 pf:DDE_Tnp_IS1595

mko:MKLM6_1815 pf:Cas_CXXC_CXXC pf:DDE_Tnp_IS1595

mmai:sS8_3743 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:Elf1 pf:zf-TFIIB pf:Zn_ribbon_recom pf:Zn_ribbon_SprT pf:zf-BED pf:HTH_11 pf:DDE_Tnp_IS1595 pf:GYF_2

mmot:QZJ86_02370 pf:Zn_Tnp_IS1595 pf:HVO_2753_ZBP pf:OrfB_Zn_ribbon pf:DDE_Tnp_IS1595

msze:MSZNOR_1046 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:Elf1 pf:zf-TFIIB pf:Zn_ribbon_recom pf:Zn_ribbon_SprT pf:zf-BED pf:HTH_11 pf:DDE_Tnp_IS1595 pf:GYF_2

mtw:CQW49_07990 pf:HypA pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:HVO_2753_ZBP pf:DDE_Tnp_IS1595

mvs:MVIS_1184 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:Opy2 pf:HTH_24 pf:DDE_Tnp_IS1595 pf:ENOD93

narc:NTG6680_3091 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:Zn_ribbon_recom pf:zf-TFIIB pf:DDE_Tnp_IS1595

nax:HC341_02750 pf:Zn_Tnp_IS1595 pf:HTH_23 pf:DDE_Tnp_IS1595

nim:W01_08940 pf:Zn_Tnp_IS1595 pf:DUF2387 pf:ADK_lid pf:OrfB_Zn_ribbon pf:Lar_restr_allev pf:zf-TFIIB pf:HTH_11 pf:DDE_Tnp_IS1595

nit:NAL212_1363 pf:Zn_Tnp_IS1595 pf:Elf1 pf:OrfB_Zn_ribbon pf:Fe_dep_repress pf:HTH_24 pf:DDE_Tnp_IS1595

ojd:NP439_08655 pf:Zn_Tnp_IS1595 pf:DUF2387 pf:DDE_Tnp_IS1595

ome:OLMES_4344 pf:Zn_Tnp_IS1595 pf:Opy2 pf:HTH_23 pf:FtsK_gamma pf:DDE_Tnp_IS1595

otd:J1M35_03530 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

paeu:BN889_06881 pf:Zn_Tnp_IS1595 pf:Cys_rich_KTR pf:Prim_Zn_Ribbon pf:zf-TFIIB pf:KORA pf:DUF1281_C pf:DDE_Tnp_IS1595

parb:CJU94_00125 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:HypA pf:DUF2387 pf:zf-TFIIB pf:DDE_Tnp_IS1595

pkp:SK3146_04620 pf:Zn_Tnp_IS1595 pf:Elf1 pf:DUF2387 pf:TFIIS_C pf:zf-TFIIB pf:DDE_Tnp_IS1595 pf:Anti-TRAP

psd:DSC_11385 pf:DpnI pf:Zn_Tnp_IS1595 pf:DUF4428 pf:Rubredoxin_2 pf:DDE_Tnp_IS1595

rth:LRK53_06985 pf:DpnI pf:Zn_Tnp_IS1595 pf:zf-TFIIB pf:DDE_Tnp_IS1595 pf:SGSH_C

rug:QC826_17525 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:zf-TFIIB pf:DDE_Tnp_IS1595

scia:HUG15_03170 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

sdeo:D0436_24780 pf:Zn_Tnp_IS1595 pf:Opy2 pf:CpXC pf:DDE_Tnp_IS1595 pf:FrhB_FdhB_C

shai:LMH63_06005 pf:Zn_Tnp_IS1595 pf:HTH_23 pf:DDE_Tnp_IS1595

slj:EGC82_02465 pf:Zn_Tnp_IS1595 pf:DUF2387 pf:DDE_Tnp_IS1595

syny:BM449_00885 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

tak:Tharo_0211 pf:Zn_Tnp_IS1595 pf:Lar_restr_allev pf:DDE_Tnp_IS1595

tbog:LT988_17655 pf:HypA pf:Zn_Tnp_IS1595 pf:Elf1 pf:zf-Sec23_Sec24 pf:CPxCG_zf pf:DDE_Tnp_IS1595

tfri:Thiofri_03513 pf:Zn_Tnp_IS1595 pf:HypA pf:Elf1 pf:Zn-ribbon_8 pf:OrfB_Zn_ribbon pf:DDE_Tnp_IS1595

thim:KFB96_18725 pf:Zn_Tnp_IS1595 pf:zf-Sec23_Sec24 pf:Lar_restr_allev pf:DDE_Tnp_IS1595

tni:TVNIR_1137 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

tti:THITH_05225 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

tvr:TVD_01090 pf:Zn_Tnp_IS1595 pf:HypA pf:HTH_11 pf:DDE_Tnp_IS1595

twg:Thiowin_04003 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:Lar_restr_allev pf:DDE_Tnp_IS1595

vjp:NP165_17795 pf:Zn_Tnp_IS1595 pf:Ribosomal_L37ae pf:TP2 pf:Opy2 pf:DDE_Tnp_IS1595 pf:QueG_DUF1730

wez:IC757_09455 pf:Zn_Tnp_IS1595 pf:Elf1 pf:Opy2 pf:HTH_23 pf:DDE_Tnp_IS1595

xax:XACM_2135 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

xbc:ELE36_04625 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:HVO_2753_ZBP pf:DUF2387 pf:zf-LITAF-like pf:Zn_ribbon_SprT pf:OrfB_Zn_ribbon pf:zf-TFIIB pf:HTH_11 pf:DDE_Tnp_IS1595

xca:xcc-b100_2467 pf:Zn_Tnp_IS1595 pf:Prim_Zn_Ribbon pf:zf-TFIIB pf:RNaseH_like pf:DDE_Tnp_IS1595

xcb:XC_3034 pf:Zn_Tnp_IS1595 pf:Prim_Zn_Ribbon pf:zf-TFIIB pf:RNaseH_like pf:DDE_Tnp_IS1595

xcc:XCC2107 pf:Zn_Tnp_IS1595 pf:Prim_Zn_Ribbon pf:zf-TFIIB pf:RNaseH_like pf:DDE_Tnp_IS1595

xcv:XCV2436 pf:Zn_Tnp_IS1595 pf:Cys_rich_KTR pf:DDE_Tnp_IS1595

xcz:EBN15_04465 pf:Zn_Tnp_IS1595 pf:Cys_rich_KTR pf:zf-TFIIB pf:KORA pf:DDE_Tnp_IS1595

xga:BI317_07565 pf:Zn_Tnp_IS1595 pf:Prim_Zn_Ribbon pf:zf-TFIIB pf:RNaseH_like pf:DDE_Tnp_IS1595

xhr:XJ27_03710 pf:Zn_Tnp_IS1595 pf:Prim_Zn_Ribbon pf:zf-TFIIB pf:RNaseH_like pf:DDE_Tnp_IS1595

xhy:FZ025_03275 pf:Zn_Tnp_IS1595 pf:zf-TFIIB pf:DDE_Tnp_IS1595

xom:XOO4037 pf:Ribosomal_L37ae pf:Zn_Tnp_IS1595 pf:Zn_ribbon_recom pf:zf-TFIIB pf:DDE_Tnp_IS1595

xoo:XOO2883 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_recom pf:zf-TFIIB pf:HTH_11 pf:DDE_Tnp_IS1595

xop:PXO_00040 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_recom pf:zf-TFIIB pf:DDE_Tnp_IS1595

xor:XOC_2502 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_recom pf:zf-TFIIB pf:DDE_Tnp_IS1595

xoy:AZ54_09795 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_recom pf:zf-TFIIB pf:DDE_Tnp_IS1595

xoz:BE73_04915 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_recom pf:zf-TFIIB pf:DDE_Tnp_IS1595

xpe:BJD13_14845 pf:Zn_Tnp_IS1595 pf:zf-TFIIB pf:DDE_Tnp_IS1595

xpr:MUG10_20815 pf:Zn_Tnp_IS1595 pf:VSP pf:DDE_Tnp_IS1595

xth:G4Q83_03260 pf:Zn_Tnp_IS1595 pf:Elf1 pf:Opy2 pf:HTH_23 pf:DDE_Tnp_IS1595

xtn:FD63_03145 pf:Zn_Tnp_IS1595 pf:Cys_rich_KTR pf:DDE_Tnp_IS1595

xve:BJD12_08015 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595