Search common motifs in selected sequences


  
Motifs : pf:AAA_19 (1)AAA domain
 pf:ADD_DNMT3 (1)
 pf:Alp7A_like_C (1)
 pf:Borrelia_P83 (3)Borrelia P83/100 protein
 pf:C1_2 (2)C1 domain
 pf:C1_4 (1)TFIIH C1-like domain
 pf:CPxCG_zf (5)
 pf:Cas_CXXC_CXXC (1)CRISPR-associated protein (Cas_CXXC_CXXC)
 pf:CpXC (1)CpXC protein
 pf:Cys_rich_CPXG (4)Cysteine-rich CPXCG
 pf:Cys_rich_KTR (1)Cysteine-rich KTR
 pf:DDE_Tnp_IS1595 (100)ISXO2-like transposase domain
 pf:DDE_Tnp_IS240 (10)DDE domain
 pf:DDE_Tnp_IS66 (1)Transposase IS66 family
 pf:DJC28_CD (4)
 pf:DUF2387 (6)Probable metal-binding protein (DUF2387)
 pf:DUF35_N (19)Rubredoxin-like zinc ribbon domain (DUF35_N)
 pf:DUF4379 (1)Probable Zinc-ribbon domain
 pf:DUF4503 (1)Domain of unknown function (DUF4503)
 pf:DUF5841 (1)
 pf:DUF6729 (1)
 pf:DZR (1)Double zinc ribbon
 pf:DmmA-like_C (2)
 pf:DpnI (4)Dam-replacing family
 pf:Elf1 (14)Transcription elongation factor Elf1 like
 pf:Glyco_transf_7N (1)N-terminal region of glycosyl transferase group 7
 pf:HTH_1 (1)Bacterial regulatory helix-turn-helix protein, lysR family
 pf:HTH_10 (1)HTH DNA binding domain
 pf:HTH_11 (3)HTH domain
 pf:HTH_23 (6)Homeodomain-like domain
 pf:HTH_24 (1)Winged helix-turn-helix DNA-binding
 pf:HTH_micro (1)HTH-like
 pf:HTH_psq (1)helix-turn-helix, Psq domain
 pf:HypA (2)Hydrogenase/urease nickel incorporation, metallochaperone, hypA
 pf:IBR_1 (2)
 pf:Jiv90 (1)Cleavage inducing molecular chaperone
 pf:Lar_restr_allev (15)Restriction alleviation protein Lar
 pf:MRP-L27 (2)Mitochondrial ribosomal protein L27
 pf:Mu-like_Com (1)Mu-like prophage protein Com
 pf:NNH1 (1)
 pf:Ogr_Delta (2)Ogr/Delta-like zinc finger
 pf:OrfB_Zn_ribbon (7)Putative transposase DNA-binding domain
 pf:PHD_ash2p_like (1)
 pf:Prim_Zn_Ribbon (3)Zinc-binding domain of primase-helicase
 pf:RIM2a_ZnF (1)
 pf:RNHCP (5)RNHCP domain
 pf:SH3_7 (1)SH3 domain of SH3b2 type
 pf:SNAPC3 (2)
 pf:Sigma70_r4_2 (3)Sigma-70, region 4
 pf:SocA_Panacea (1)
 pf:TFIIB_Zn-ribbon_Tryp (6)
 pf:TF_Zn_Ribbon (1)TFIIB zinc-binding
 pf:Thio2_N (2)
 pf:Tmemb_55A (2)Transmembrane protein 55A
 pf:UvrD-helicase (1)UvrD/REP helicase N-terminal domain
 pf:Vps62 (1)
 pf:YhfH (1)YhfH-like protein
 pf:YjdM_Zn_Ribbon (4)
 pf:ZNF512_C2HC (1)
 pf:Zn-ribbon_8 (19)Zinc ribbon domain
 pf:Zn_Tnp_IS1595 (99)Transposase zinc-ribbon domain
 pf:Zn_Tnp_IS91 (2)Transposase zinc-binding domain
 pf:Zn_ribbon_SprT (13)
 pf:Zn_ribbon_recom (1)Recombinase zinc beta ribbon domain
 pf:rve_2 (2)Integrase core domain
 pf:rve_3 (1)Integrase core domain
 pf:tRNA-synt_1f (7)tRNA synthetases class I (K)
 pf:zf-BED (1)BED zinc finger
 pf:zf-C2H2_6 (1)C2H2-type zinc finger
 pf:zf-DNL (1)DNL zinc finger
 pf:zf-Dof (3)Dof domain, zinc finger
 pf:zf-LITAF-like (2)LITAF-like zinc ribbon domain
 pf:zf-RRN7 (2)Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
 pf:zf-RanBP (1)Zn-finger in Ran binding protein and others
 pf:zinc_ribbon_4 (2)zinc-ribbon domain
 pf:zinc_ribbon_5 (2)zinc-ribbon domain
 pf:zinc_ribbon_6 (1)Zinc-ribbon

aagg:ETAA8_68330 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:YjdM_Zn_Ribbon pf:Elf1 pf:Lar_restr_allev pf:Prim_Zn_Ribbon pf:DDE_Tnp_IS1595

acut:MRB58_09380 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_SprT pf:DDE_Tnp_IS1595 pf:Borrelia_P83

anj:AMD1_0748 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

balb:M8231_07995 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

beba:BWI17_11345 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_SprT pf:zf-Dof pf:OrfB_Zn_ribbon pf:Lar_restr_allev pf:DDE_Tnp_IS1595 pf:rve_2

bos:BSY19_2898 pf:Zn_Tnp_IS1595 pf:HTH_23 pf:DDE_Tnp_IS1595


brea:HZ989_05965 pf:Zn_Tnp_IS1595 pf:tRNA-synt_1f pf:Elf1 pf:zf-RanBP pf:DDE_Tnp_IS1595

brk:CWS35_10165 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

bvc:CEP68_02305 pf:Zn_Tnp_IS1595 pf:DUF2387 pf:Zn_ribbon_SprT pf:C1_2 pf:TF_Zn_Ribbon pf:HTH_24 pf:DDE_Tnp_IS1595 pf:HTH_psq

bvit:JIP62_08620 pf:Zn_Tnp_IS1595 pf:ZNF512_C2HC pf:DDE_Tnp_IS1595

bvr:BVIR_10 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:DUF2387 pf:Jiv90 pf:DDE_Tnp_IS1595

cauf:CSW63_16070 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DDE_Tnp_IS1595

cgc:Cyagr_3370 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

cij:WG74_02100 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DDE_Tnp_IS1595

cmet:K6K41_09555 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_SprT pf:DDE_Tnp_IS1595

cna:AB433_09475 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

con:TQ29_06880 pf:Zn_Tnp_IS1595 pf:RNHCP pf:DDE_Tnp_IS1595

daa:AKL17_4627 pf:Zn_Tnp_IS1595 pf:RNHCP pf:DDE_Tnp_IS1595

dsu:Dsui_3353 pf:Zn_Tnp_IS1595 pf:Elf1 pf:DDE_Tnp_IS1595

ecul:PVA46_08265 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:MRP-L27 pf:DDE_Tnp_IS66

ery:CP97_10180 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DUF35_N pf:Elf1 pf:Lar_restr_allev pf:zinc_ribbon_6 pf:HTH_11 pf:DDE_Tnp_IS1595

fil:BN1229_v1_2255 pf:Zn_Tnp_IS1595 pf:SNAPC3 pf:Sigma70_r4_2 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

fiy:BN1229_v1_2254 pf:Zn_Tnp_IS1595 pf:SNAPC3 pf:Sigma70_r4_2 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

gak:X907_2739 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:Elf1 pf:DDE_Tnp_IS1595

grw:FTO74_01150 pf:HypA pf:Zn_Tnp_IS1595 pf:OrfB_Zn_ribbon pf:DmmA-like_C pf:HTH_micro pf:HTH_1 pf:DDE_Tnp_IS1595

hadh:FRZ61_37330 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Zn_ribbon_SprT pf:Lar_restr_allev pf:DDE_Tnp_IS1595

hdh:G5B40_11180 pf:Zn_Tnp_IS1595 pf:DUF2387 pf:zf-Dof pf:DDE_Tnp_IS1595

hdn:Hden_3213 pf:SocA_Panacea pf:Zn_Tnp_IS1595 pf:DUF35_N pf:DDE_Tnp_IS1595

hdt:HYPDE_32083 pf:Zn_Tnp_IS1595 pf:Lar_restr_allev pf:Elf1 pf:DDE_Tnp_IS1595

hmc:HYPMC_4502 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:DDE_Tnp_IS1595

htq:FRZ44_14130 pf:Zn_Tnp_IS1595 pf:DJC28_CD pf:DDE_Tnp_IS1595

lri:NCTC12151_02696 pf:Zn_Tnp_IS1595 pf:zinc_ribbon_4 pf:HTH_10 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

malu:KU6B_48860 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:Borrelia_P83

mam:Mesau_00203 pf:Zn_Tnp_IS1595 pf:Glyco_transf_7N pf:DJC28_CD pf:DDE_Tnp_IS1595 pf:SH3_7

mamo:A6B35_15385 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

mbry:B1812_14185 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_recom pf:HTH_23 pf:DJC28_CD pf:DDE_Tnp_IS1595

mcg:GL4_0454 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DUF35_N pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

mci:Mesci_1495 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Lar_restr_allev pf:DDE_Tnp_IS1595

mdi:METDI1696 pf:DDE_Tnp_IS1595

medk:QEV83_15980 pf:Zn_Tnp_IS1595 pf:tRNA-synt_1f pf:IBR_1 pf:Lar_restr_allev pf:DZR pf:DDE_Tnp_IS1595

meso:BSQ44_24180 pf:Zn_Tnp_IS1595 pf:tRNA-synt_1f pf:zf-LITAF-like pf:CPxCG_zf pf:C1_4 pf:DDE_Tnp_IS1595 pf:Vps62

mesr:FGU64_16320 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

mesw:A9K65_000960 pf:Zn_Tnp_IS1595 pf:zf-RRN7 pf:YjdM_Zn_Ribbon pf:DDE_Tnp_IS1595

metg:HT051_06330 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:Alp7A_like_C

meti:DK427_05245 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

metp:C1M51_01995 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DDE_Tnp_IS1595

mgin:FRZ54_22205 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

mgos:DIU38_000825 pf:Zn_Tnp_IS1595 pf:zinc_ribbon_5 pf:OrfB_Zn_ribbon pf:DUF6729 pf:DDE_Tnp_IS1595

miwa:SS37A_32120 pf:Zn_Tnp_IS1595 pf:Cys_rich_CPXG pf:CPxCG_zf pf:Elf1 pf:DDE_Tnp_IS1595 pf:MRP-L27

mjr:EB229_01035 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:zf-RRN7 pf:YjdM_Zn_Ribbon pf:DJC28_CD pf:DDE_Tnp_IS1595

mld:U0023_10245 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Zn_ribbon_SprT pf:DDE_Tnp_IS1595

mmei:LRP31_00990 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

mop:Mesop_3960 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Zn_ribbon_SprT pf:Elf1 pf:DDE_Tnp_IS1595

mox:DAMO_1178 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:Elf1 pf:Ogr_Delta pf:zinc_ribbon_4 pf:zf-DNL pf:CPxCG_zf pf:DDE_Tnp_IS1595 pf:NNH1

mpo:Mpop_0131 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Lar_restr_allev pf:DDE_Tnp_IS1595

msc:BN69_3093 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Ogr_Delta pf:Cys_rich_CPXG pf:Cys_rich_KTR pf:DDE_Tnp_IS1595

mtun:MTUNDRAET4_1584 pf:Zn_Tnp_IS1595 pf:tRNA-synt_1f pf:Elf1 pf:CPxCG_zf pf:DDE_Tnp_IS1595

mup:A0256_11355 pf:Zn_Tnp_IS1595 pf:Cas_CXXC_CXXC pf:DDE_Tnp_IS1595 pf:rve_3 pf:rve_2

nif:W02_29610 pf:Zn_Tnp_IS1595 pf:Elf1 pf:PHD_ash2p_like pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

niy:FQ775_12380 pf:Zn_Tnp_IS1595 pf:tRNA-synt_1f pf:zf-LITAF-like pf:Cys_rich_CPXG pf:zf-Dof pf:CPxCG_zf pf:Zn-ribbon_8 pf:DDE_Tnp_IS1595

nog:GKE62_05975 pf:Zn_Tnp_IS1595 pf:HTH_23 pf:DDE_Tnp_IS1595

nur:ATY38_14210 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DpnI pf:YhfH pf:Lar_restr_allev pf:Tmemb_55A pf:Zn_Tnp_IS91 pf:IBR_1 pf:OrfB_Zn_ribbon pf:Zn_ribbon_SprT pf:YjdM_Zn_Ribbon pf:DDE_Tnp_IS1595

nwi:Nwi_0081 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

palg:HFP57_08715 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:DDE_Tnp_IS1595

pem:OF122_16435 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DDE_Tnp_IS1595

pzu:PHZ_c3523 pf:tRNA-synt_1f pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Zn-ribbon_8 pf:DUF2387 pf:CpXC pf:zf-C2H2_6 pf:DDE_Tnp_IS1595 pf:DUF5841

rbm:TEF_03235 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

rhz:RHPLAN_02780 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

rlac:QMO75_05290 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

rmt:IAI58_17830 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

ros:CTJ15_14305 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_SprT pf:DDE_Tnp_IS1595

rpb:RPB_3478 pf:Zn_Tnp_IS1595 pf:Zn_ribbon_SprT pf:Prim_Zn_Ribbon pf:Elf1 pf:Lar_restr_allev pf:DDE_Tnp_IS1595

rpod:E0E05_14805 pf:Zn_Tnp_IS1595 pf:TFIIB_Zn-ribbon_Tryp pf:Lar_restr_allev pf:Prim_Zn_Ribbon pf:DDE_Tnp_IS1595 pf:Borrelia_P83

sami:SAMIE_1015730 pf:Zn_Tnp_IS1595 pf:OrfB_Zn_ribbon pf:DUF2387 pf:C1_2 pf:Zn_ribbon_SprT pf:DDE_Tnp_IS1595 pf:AAA_19

schy:GVO57_13500 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

sfla:SPHFLASMR4Y_00476 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:OrfB_Zn_ribbon pf:Zn_ribbon_SprT pf:Zn_Tnp_IS91 pf:Tmemb_55A pf:Lar_restr_allev pf:RIM2a_ZnF pf:DDE_Tnp_IS1595

sgi:SGRAN_0859 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

skr:BRX40_08035 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DUF35_N pf:TFIIB_Zn-ribbon_Tryp pf:DDE_Tnp_IS1595

smic:SmB9_23950 pf:Zn_Tnp_IS1595 pf:TFIIB_Zn-ribbon_Tryp pf:Zn_ribbon_SprT pf:Thio2_N pf:zinc_ribbon_5 pf:DDE_Tnp_IS1595

sno:Snov_0696 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

soj:K6301_03810 pf:Zn_Tnp_IS1595 pf:tRNA-synt_1f pf:Cys_rich_CPXG pf:DDE_Tnp_IS1595

spai:FPZ24_03210 pf:Zn_Tnp_IS1595 pf:TFIIB_Zn-ribbon_Tryp pf:DDE_Tnp_IS1595

spha:D3Y57_07215 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

sphd:HY78_02900 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:Thio2_N pf:Zn-ribbon_8 pf:DDE_Tnp_IS1595

sphy:CHN51_07145 pf:Zn_Tnp_IS1595 pf:HypA pf:ADD_DNMT3 pf:OrfB_Zn_ribbon pf:DpnI pf:Elf1 pf:DUF4503 pf:DmmA-like_C pf:RNHCP pf:HTH_23 pf:HTH_11 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

spii:G7077_11245 pf:Zn_Tnp_IS1595 pf:DpnI pf:RNHCP pf:DDE_Tnp_IS1595

splm:BXU08_15815 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:zf-BED pf:HTH_23 pf:DDE_Tnp_IS1595

spmi:K663_08440 pf:Zn_Tnp_IS1595 pf:DUF2387 pf:DDE_Tnp_IS1595

spph:KFK14_20050 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Lar_restr_allev pf:DDE_Tnp_IS1595

spzr:G5C33_00300 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Zn-ribbon_8 pf:DDE_Tnp_IS1595

srad:LLW23_08140 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Mu-like_Com pf:DDE_Tnp_IS1595

srhi:H9L12_07195 pf:Zn_Tnp_IS1595 pf:Elf1 pf:HTH_23 pf:Sigma70_r4_2 pf:DDE_Tnp_IS1595

ssau:H8M03_04250 pf:Zn_Tnp_IS1595 pf:DpnI pf:RNHCP pf:DDE_Tnp_IS1595

ssy:SLG_06430 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Zn-ribbon_8 pf:Lar_restr_allev pf:HTH_11 pf:DDE_Tnp_IS1595

suld:B5M07_14595 pf:Zn_Tnp_IS1595 pf:TFIIB_Zn-ribbon_Tryp pf:DDE_Tnp_IS1595

sva:SVA_0781 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

thar:T8K17_00025 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

thes:FHQ07_12825 pf:Zn_Tnp_IS1595 pf:Lar_restr_allev pf:DUF4379 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:UvrD-helicase

tmd:KUV46_11165 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

tsv:DSM104635_00822 pf:Zn_Tnp_IS1595 pf:TFIIB_Zn-ribbon_Tryp pf:DDE_Tnp_IS1595