Search common motifs in selected sequences
Motifs :
pf:AAA_19
(1)
AAA domain
pf:ADD_DNMT3
(1)
pf:Alp7A_like_C
(1)
pf:Borrelia_P83
(3)
Borrelia P83/100 protein
pf:C1_2
(2)
C1 domain
pf:C1_4
(1)
TFIIH C1-like domain
pf:CPxCG_zf
(5)
pf:Cas_CXXC_CXXC
(1)
CRISPR-associated protein (Cas_CXXC_CXXC)
pf:CpXC
(1)
CpXC protein
pf:Cys_rich_CPXG
(4)
Cysteine-rich CPXCG
pf:Cys_rich_KTR
(1)
Cysteine-rich KTR
pf:DDE_Tnp_IS1595
(100)
ISXO2-like transposase domain
pf:DDE_Tnp_IS240
(10)
DDE domain
pf:DDE_Tnp_IS66
(1)
Transposase IS66 family
pf:DJC28_CD
(4)
pf:DUF2387
(6)
Probable metal-binding protein (DUF2387)
pf:DUF35_N
(19)
Rubredoxin-like zinc ribbon domain (DUF35_N)
pf:DUF4379
(1)
Probable Zinc-ribbon domain
pf:DUF4503
(1)
Domain of unknown function (DUF4503)
pf:DUF5841
(1)
pf:DUF6729
(1)
pf:DZR
(1)
Double zinc ribbon
pf:DmmA-like_C
(2)
pf:DpnI
(4)
Dam-replacing family
pf:Elf1
(14)
Transcription elongation factor Elf1 like
pf:Glyco_transf_7N
(1)
N-terminal region of glycosyl transferase group 7
pf:HTH_1
(1)
Bacterial regulatory helix-turn-helix protein, lysR family
pf:HTH_10
(1)
HTH DNA binding domain
pf:HTH_11
(3)
HTH domain
pf:HTH_23
(6)
Homeodomain-like domain
pf:HTH_24
(1)
Winged helix-turn-helix DNA-binding
pf:HTH_micro
(1)
HTH-like
pf:HTH_psq
(1)
helix-turn-helix, Psq domain
pf:HypA
(2)
Hydrogenase/urease nickel incorporation, metallochaperone, hypA
pf:IBR_1
(2)
pf:Jiv90
(1)
Cleavage inducing molecular chaperone
pf:Lar_restr_allev
(15)
Restriction alleviation protein Lar
pf:MRP-L27
(2)
Mitochondrial ribosomal protein L27
pf:Mu-like_Com
(1)
Mu-like prophage protein Com
pf:NNH1
(1)
pf:Ogr_Delta
(2)
Ogr/Delta-like zinc finger
pf:OrfB_Zn_ribbon
(7)
Putative transposase DNA-binding domain
pf:PHD_ash2p_like
(1)
pf:Prim_Zn_Ribbon
(3)
Zinc-binding domain of primase-helicase
pf:RIM2a_ZnF
(1)
pf:RNHCP
(5)
RNHCP domain
pf:SH3_7
(1)
SH3 domain of SH3b2 type
pf:SNAPC3
(2)
pf:Sigma70_r4_2
(3)
Sigma-70, region 4
pf:SocA_Panacea
(1)
pf:TFIIB_Zn-ribbon_Tryp
(6)
pf:TF_Zn_Ribbon
(1)
TFIIB zinc-binding
pf:Thio2_N
(2)
pf:Tmemb_55A
(2)
Transmembrane protein 55A
pf:UvrD-helicase
(1)
UvrD/REP helicase N-terminal domain
pf:Vps62
(1)
pf:YhfH
(1)
YhfH-like protein
pf:YjdM_Zn_Ribbon
(4)
pf:ZNF512_C2HC
(1)
pf:Zn-ribbon_8
(19)
Zinc ribbon domain
pf:Zn_Tnp_IS1595
(99)
Transposase zinc-ribbon domain
pf:Zn_Tnp_IS91
(2)
Transposase zinc-binding domain
pf:Zn_ribbon_SprT
(13)
pf:Zn_ribbon_recom
(1)
Recombinase zinc beta ribbon domain
pf:rve_2
(2)
Integrase core domain
pf:rve_3
(1)
Integrase core domain
pf:tRNA-synt_1f
(7)
tRNA synthetases class I (K)
pf:zf-BED
(1)
BED zinc finger
pf:zf-C2H2_6
(1)
C2H2-type zinc finger
pf:zf-DNL
(1)
DNL zinc finger
pf:zf-Dof
(3)
Dof domain, zinc finger
pf:zf-LITAF-like
(2)
LITAF-like zinc ribbon domain
pf:zf-RRN7
(2)
Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
pf:zf-RanBP
(1)
Zn-finger in Ran binding protein and others
pf:zinc_ribbon_4
(2)
zinc-ribbon domain
pf:zinc_ribbon_5
(2)
zinc-ribbon domain
pf:zinc_ribbon_6
(1)
Zinc-ribbon