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Motifs : | pf:56B_RHH | |
| pf:ANT | Phage antirepressor protein KilAC domain
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| pf:A_thal_3526 | Plant protein 1589 of unknown function (A_thal_3526)
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| pf:Aconitase_B_N | Aconitate B N-terminal domain
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| pf:Aldo_ket_red | Aldo/keto reductase family
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| pf:Arg_repressor | Arginine repressor, DNA binding domain
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| pf:AroM | AroM protein
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| pf:ArsR | ArsR transcriptional regulator
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| pf:Bot1p | Eukaryotic mitochondrial regulator protein
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| pf:CENP-B_N | CENP-B N-terminal DNA-binding domain
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| pf:CFAP91 | |
| pf:Clr5 | Clr5 domain
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| pf:DDE_1 | DDE superfamily endonuclease
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| pf:DDE_3 | DDE superfamily endonuclease
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| pf:DDE_Tnp_ISAZ013 | Rhodopirellula transposase DDE domain
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| pf:DUF1580 | Protein of unknown function (DUF1580)
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| pf:DUF1804 | Protein of unknown function (DUF1804)
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| pf:DUF2089 | Protein of unknown function (DUF2089)
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| pf:DUF2124 | Uncharacterized protein conserved in archaea (DUF2124)
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| pf:DUF3427 | Domain of unknown function (DUF3427)
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| pf:DUF4224 | Domain of unknown function (DUF4224)
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| pf:DUF4817 | Domain of unknown function (DUF4817)
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| pf:DUF6471 | |
| pf:DUF746 | Domain of Unknown Function (DUF746)
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| pf:E3_UFM1_ligase | |
| pf:Emfourin | |
| pf:FUR | Ferric uptake regulator family
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| pf:FaeA | FaeA-like protein
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| pf:FapA_N | |
| pf:Fe_dep_repress | Iron dependent repressor, N-terminal DNA binding domain
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| pf:FeoC | FeoC like transcriptional regulator
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| pf:FoP_duplication | C-terminal duplication domain of Friend of PRMT1
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| pf:GP63 | |
| pf:Glyco_hydro_57 | Glycosyl hydrolase family 57
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| pf:GntR | Bacterial regulatory proteins, gntR family
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| pf:HEPN_RES_NTD1 | |
| pf:HSCB_C | HSCB C-terminal oligomerisation domain
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| pf:HTH_1 | Bacterial regulatory helix-turn-helix protein, lysR family
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| pf:HTH_10 | HTH DNA binding domain
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| pf:HTH_11 | HTH domain
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| pf:HTH_17 | Helix-turn-helix domain
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| pf:HTH_20 | Helix-turn-helix domain
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| pf:HTH_21 | HTH-like domain
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| pf:HTH_22 | HTH domain
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| pf:HTH_23 | Homeodomain-like domain
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| pf:HTH_24 | Winged helix-turn-helix DNA-binding
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| pf:HTH_26 | Cro/C1-type HTH DNA-binding domain
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| pf:HTH_27 | Winged helix DNA-binding domain
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| pf:HTH_28 | Helix-turn-helix domain
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| pf:HTH_29 | Winged helix-turn helix
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| pf:HTH_3 | Helix-turn-helix
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| pf:HTH_30 | PucR C-terminal helix-turn-helix domain
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| pf:HTH_31 | Helix-turn-helix domain
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| pf:HTH_32 | Homeodomain-like domain
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| pf:HTH_33 | Winged helix-turn helix
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| pf:HTH_35 | Winged helix-turn-helix DNA-binding
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| pf:HTH_36 | Helix-turn-helix domain
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| pf:HTH_37 | Helix-turn-helix domain
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| pf:HTH_38 | Helix-turn-helix domain
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| pf:HTH_40 | Helix-turn-helix domain
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| pf:HTH_5 | Bacterial regulatory protein, arsR family
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| pf:HTH_50 | |
| pf:HTH_6 | Helix-turn-helix domain, rpiR family
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| pf:HTH_7 | Helix-turn-helix domain of resolvase
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| pf:HTH_ABP1_N | |
| pf:HTH_AraC | Bacterial regulatory helix-turn-helix proteins, AraC family
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| pf:HTH_AsnC-type | AsnC-type helix-turn-helix domain
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| pf:HTH_Crp_2 | Crp-like helix-turn-helix domain
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| pf:HTH_DeoR | DeoR-like helix-turn-helix domain
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| pf:HTH_IclR | IclR helix-turn-helix domain
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| pf:HTH_PafC | |
| pf:HTH_Tnp_1 | Transposase
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| pf:HTH_Tnp_1_2 | Helix-turn-helix of insertion element transposase
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| pf:HTH_Tnp_4 | Helix-turn-helix of DDE superfamily endonuclease
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| pf:HTH_Tnp_IS1 | InsA C-terminal domain
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| pf:HTH_Tnp_IS630 | Transposase
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| pf:HTH_Tnp_ISL3 | Helix-turn-helix domain of transposase family ISL3
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| pf:HTH_Tnp_Tc3_2 | Transposase
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| pf:HTH_Tnp_Tc5 | Tc5 transposase DNA-binding domain
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| pf:HTH_WhiA | WhiA C-terminal HTH domain
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| pf:HTH_psq | helix-turn-helix, Psq domain
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| pf:KfrA_N | Plasmid replication region DNA-binding N-term
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| pf:LZ_Tnp_IS481 | leucine-zipper of insertion element IS481
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| pf:LacI | Bacterial regulatory proteins, lacI family
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| pf:LexA_DNA_bind | LexA DNA binding domain
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| pf:Lge1 | Transcriptional regulatory protein LGE1
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| pf:MRP-L20 | Mitochondrial ribosomal protein subunit L20
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| pf:MarR | MarR family
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| pf:MarR_2 | MarR family
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| pf:MerR | MerR family regulatory protein
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| pf:MerR_1 | MerR HTH family regulatory protein
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| pf:Mga | Mga helix-turn-helix domain
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| pf:MgtC_SapB_C | |
| pf:Mor | Mor transcription activator family
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| pf:OTU1_UBXL | |
| pf:PAX | 'Paired box' domain
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| pf:PPP5 | PPP5 TPR repeat region
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| pf:PaaX | PaaX-like protein
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| pf:Penicillinase_R | Penicillinase repressor
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| pf:Phage_CI_repr | Bacteriophage CI repressor helix-turn-helix domain
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| pf:Phage_Mu_Gp27 | |
| pf:Phage_NinH | Phage NinH protein
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| pf:Phage_int_SAM_1 | Phage integrase, N-terminal SAM-like domain
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| pf:RBD | Raf-like Ras-binding domain
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| pf:Raf1_HTH | |
| pf:Rho_GDI | RHO protein GDP dissociation inhibitor
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| pf:Ribosomal_L13e | Ribosomal protein L13e
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| pf:Rrf2 | Transcriptional regulator
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| pf:SAP | SAP domain
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| pf:Sigma54_DBD | Sigma-54, DNA binding domain
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| pf:Sigma70_ECF | ECF sigma factor
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| pf:Sigma70_r4 | Sigma-70, region 4
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| pf:Sigma70_r4_2 | Sigma-70, region 4
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| pf:Slx4 | Slx4 endonuclease
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| pf:SocA_Panacea | |
| pf:SpoIIID | Stage III sporulation protein D
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| pf:Stirrup | Stirrup
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| pf:SurA_N | SurA N-terminal domain
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| pf:TUG-UBL1 | TUG ubiquitin-like domain
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| pf:Tam41_Mmp37 | |
| pf:Terminase_5 | Putative ATPase subunit of terminase (gpP-like)
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| pf:ThiS | ThiS family
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| pf:Tn7_Tnp_TnsA_C | TnsA endonuclease C terminal
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| pf:TnsD | Tn7-like transposition protein D
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| pf:TonB_2 | TonB C terminal
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| pf:Translin | Translin family
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| pf:TrmB | Sugar-specific transcriptional regulator TrmB
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| pf:Trp_repressor | Trp repressor protein
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| pf:UPF0122 | Putative helix-turn-helix protein, YlxM / p13 like
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| pf:UPF0154 | Uncharacterised protein family (UPF0154)
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| pf:UPF0175 | Uncharacterised protein family (UPF0175)
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| pf:XPG_I_2 | XPG domain containing
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| pf:YdaS_toxin | |
| pf:YfeC-like | |
| pf:bact_SelB_WH_2nd | |