Search common motifs in selected sequences


  
Motifs : pf:ABC_membraneABC transporter transmembrane region
 pf:ABC_tranABC transporter
 pf:Adeno_E3_CR2Adenovirus E3 region protein CR2
 pf:Baculo_11_kDaBaculovirus 11 kDa family
 pf:C1-setImmunoglobulin C1-set domain
 pf:C2-set_2CD80-like C2-set immunoglobulin domain
 pf:CEND1Cell cycle exit and neuronal differentiation protein 1
 pf:Cadherin_C_2Cadherin cytoplasmic C-terminal
 pf:CcmDHeme exporter protein D (CcmD)
 pf:DAG1Dystroglycan (Dystrophin-associated glycoprotein 1)
 pf:DUF202Domain of unknown function (DUF202)
 pf:DUF2627Protein of unknown function (DUF2627)
 pf:DUF3042Protein of unknown function (DUF3042)
 pf:DUF3180Protein of unknown function (DUF3180)
 pf:DUF3188Protein of unknown function (DUF3188)
 pf:DUF4017Protein of unknown function (DUF4017)
 pf:DUF4381Domain of unknown function (DUF4381)
 pf:DUF4405Domain of unknown function (DUF4405)
 pf:DUF5325
 pf:DUF5337
 pf:DUF5353
 pf:DUF5511
 pf:DUF5957
 pf:DUF6007
 pf:DUF6338
 pf:DUF6405
 pf:DUF6479
 pf:DUF6676
 pf:DarcyninDarcynin, domain of unknown function
 pf:ESR1_COestrogen-type nuclear receptor final C-terminal
 pf:EphA2_TMEphrin type-A receptor 2 transmembrane domain
 pf:EssAWXG100 protein secretion system (Wss), protein EssA
 pf:FeoB_associated
 pf:FixQCbb3-type cytochrome oxidase component FixQ
 pf:Fox-1_CCalcitonin gene-related peptide regulator C terminal
 pf:GBS_Bsp-likeGBS Bsp-like repeat
 pf:Gag_p24_C
 pf:Glycophorin_AGlycophorin A
 pf:Gram_pos_anchorGram positive anchor
 pf:HCV_NS4aHepatitis C virus non-structural protein NS4a
 pf:HTH_32Homeodomain-like domain
 pf:I-setImmunoglobulin I-set domain
 pf:Ig_2Immunoglobulin domain
 pf:Ig_3Immunoglobulin domain
 pf:Insulin_TMD
 pf:LapA_dom
 pf:MATalpha_HMGboxMating-type protein MAT alpha 1 HMG-box
 pf:MHC_IClass I Histocompatibility antigen, domains alpha 1 and 2
 pf:MHC_II_alphaClass II histocompatibility antigen, alpha domain
 pf:MHC_II_betaClass II histocompatibility antigen, beta domain
 pf:MHC_I_2Class I Histocompatibility antigen, NKG2D ligand, domains 1 and 2
 pf:MHC_I_3MHC-I family domain
 pf:MHC_I_CMHC_I C-terminus
 pf:ODV-E18Occlusion-derived virus envelope protein ODV-E18
 pf:PTCRAPre-T-cell antigen receptor
 pf:PepSY_TMPepSY-associated TM region
 pf:Phage_fiber_CPutative prophage tail fibre C-terminus
 pf:Phage_holin_2_4Bacteriophage holin family, superfamily II-like
 pf:Phage_holin_3_6Putative Actinobacterial Holin-X, holin superfamily III
 pf:Phage_holin_5_2Phage holin family Hol44, in holin superfamily V
 pf:Pilin_NArchaeal Type IV pilin, N-terminal
 pf:PodoplaninPodoplanin
 pf:ProtocadherinProtocadherin
 pf:Psg1
 pf:RAMPReceptor activity modifying family
 pf:RAMP4Ribosome associated membrane protein RAMP4
 pf:RIFIN
 pf:RNA_pol_Rpa2_4RNA polymerase I, Rpa2 specific domain
 pf:SCFStem cell factor
 pf:Sec16_NVesicle coat trafficking protein Sec16 N-terminus
 pf:Stevor
 pf:SyndecanSyndecan domain
 pf:TM_ErbB1
 pf:TctBTripartite tricarboxylate transporter TctB family
 pf:TrbCTrbC/VIRB2 family
 pf:Trp_oprn_chpTryptophan-associated transmembrane protein (Trp_oprn_chp)
 pf:VSPGiardia variant-specific surface protein
 pf:VpuVpu protein
 pf:YabA
 pf:dsrmDouble-stranded RNA binding motif
 pf:igImmunoglobulin domain
 pf:stn_TNFRSF12ATumour necrosis factor receptor stn_TNFRSF12A_TNFR domain

aam:106489919 pf:MHC_I pf:MHC_I_3 pf:HTH_32 pf:ig pf:Ig_3 pf:C1-set pf:MHC_I pf:MHC_I_3 pf:HTH_32 pf:ig pf:Ig_3 pf:C1-set pf:Psg1 pf:DUF6007

achc:115338300 pf:MHC_I pf:MHC_II_alpha pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:ig pf:Psg1 pf:FixQ

acs:100554718 pf:MHC_I pf:MHC_I_3 pf:Psg1 pf:C1-set pf:Ig_2 pf:Insulin_TMD pf:Podoplanin

acun:113490617 pf:MHC_I pf:MHC_I_3 pf:ig pf:C1-set pf:Ig_2

acyg:125181878 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:HTH_32 pf:C2-set_2 pf:Ig_3 pf:I-set pf:C1-set pf:ig pf:Ig_2 pf:DUF3180 pf:VSP

aful:116500261 pf:MHC_I pf:MHC_I_3 pf:MHC_I_2 pf:C2-set_2 pf:Ig_3 pf:C1-set pf:ig

afz:127561629 pf:MHC_I pf:MHC_I_3 pf:MHC_I_2 pf:Ig_3 pf:Ig_2 pf:C1-set pf:ig pf:C2-set_2 pf:I-set pf:MHC_I_C

agen:126034962 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:ig pf:I-set pf:Psg1 pf:ODV-E18

anu:117716636 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:Ig_2 pf:C1-set pf:I-set pf:TM_ErbB1

apla:119715258 pf:MHC_I pf:MHC_I_3 pf:C2-set_2 pf:Ig_3 pf:I-set pf:C1-set pf:Ig_2 pf:ig pf:DUF3180 pf:VSP

apri:131189845 pf:MHC_I pf:MHC_I_3 pf:Ig_2 pf:C1-set pf:Insulin_TMD

arow:112963734 pf:MHC_I pf:MHC_I_3 pf:ig pf:Ig_3 pf:C1-set pf:Ig_2 pf:stn_TNFRSF12A

arut:117434206 pf:MHC_I pf:MHC_I_2 pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:Ig_2 pf:Psg1 pf:DUF6405 pf:PepSY_TM pf:Protocadherin pf:EphA2_TM pf:DUF3042

asao:132765334 pf:MHC_I pf:MHC_I_3 pf:C1-set pf:Insulin_TMD

asn:102380209 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:Ig_3 pf:Ig_2 pf:C1-set pf:I-set pf:Insulin_TMD

cabi:116838521 pf:MHC_I pf:MHC_I_3 pf:C1-set pf:Ig_3 pf:Ig_2 pf:ig pf:I-set pf:stn_TNFRSF12A pf:Podoplanin

cata:118260299 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:C2-set_2 pf:Ig_3 pf:I-set pf:C1-set pf:Ig_2 pf:ig pf:VSP

cbrc:103617075 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:Ig_3 pf:C1-set pf:Ig_2 pf:ig pf:Psg1

ccae:111922139 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:ig pf:C1-set pf:Psg1

ccay:125621130 pf:MHC_I pf:ig pf:Ig_2 pf:C1-set pf:DUF4381 pf:DUF5337 pf:CcmD

ccw:120412176 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:C1-set pf:ig pf:Baculo_11_kDa

cfa:474836 pf:MHC_I pf:C2-set_2 pf:Ig_3 pf:C1-set pf:ig pf:Ig_2 pf:Psg1 pf:VSP pf:Insulin_TMD pf:MHC_I_C

cjo:107321530 pf:MHC_I pf:MHC_I_3 pf:MHC_I pf:MHC_I_3 pf:C1-set

clv:102084942 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:Ig_2 pf:C1-set pf:ig pf:I-set

cmy:102930327 pf:MHC_I pf:MHC_II_beta pf:MHC_I_3 pf:MHC_II_beta pf:C1-set pf:ig pf:Insulin_TMD pf:EphA2_TM pf:DUF3042

cpea:104385235 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:Ig_3 pf:C1-set pf:Ig_2 pf:Psg1

cpic:101951445 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:Ig_3 pf:C1-set pf:ig pf:I-set pf:Psg1 pf:Podoplanin pf:SCF pf:stn_TNFRSF12A

csyr:103273536 pf:MHC_I pf:Sec16_N pf:Ig_3 pf:ig pf:C1-set pf:C2-set_2 pf:Ig_2 pf:Psg1 pf:MHC_I_C

ctig:120301599 pf:MHC_I pf:Ig_2 pf:C1-set pf:ig

cuca:104060504 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:C2-set_2 pf:ig pf:I-set pf:GBS_Bsp-like

cvf:104292679 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:MHC_I_2 pf:Ig_3 pf:C1-set pf:ig pf:stn_TNFRSF12A

dcc:119854956 pf:MHC_I pf:YabA pf:MHC_I_3 pf:C1-set pf:Ig_3 pf:ig pf:Ig_2 pf:RAMP pf:Podoplanin pf:SCF

dne:112995101 pf:MHC_I pf:MHC_I_3 pf:C1-set pf:Ig_3 pf:ig pf:Ig_2 pf:Psg1 pf:RAMP pf:stn_TNFRSF12A

dsp:122111318 pf:MHC_I pf:MATalpha_HMGbox pf:Ig_3 pf:C2-set_2 pf:C1-set pf:ig pf:Ig_2 pf:Psg1 pf:FixQ pf:MHC_I_C

egz:104126843 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:Ig_2 pf:I-set pf:ABC_membrane pf:ABC_membrane pf:ABC_tran

emc:129327985 pf:MHC_I pf:MHC_I_3 pf:C1-set pf:Ig_2 pf:Ig_3 pf:ig pf:MHC_I pf:C1-set pf:Ig_2 pf:I-set pf:Ig_3 pf:DUF5957

etl:114072777 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set

fab:101808190 pf:MHC_I pf:ig pf:C1-set pf:Psg1 pf:EphA2_TM

fch:102052467 pf:MHC_I pf:MHC_I_3 pf:C1-set

fpg:101924893 pf:MHC_I pf:MHC_II_beta pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:GBS_Bsp-like pf:DUF6338

gfr:102034923 pf:MHC_I pf:DUF5511 pf:Ig_3 pf:ig pf:C1-set

gga:107049124 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:Ig_3 pf:C1-set pf:ig pf:Ig_2 pf:RAMP

gja:107106868 pf:MHC_I pf:C1-set pf:Ig_2 pf:Ig_3 pf:I-set pf:Psg1 pf:Insulin_TMD

gsh:117350101 pf:DUF3188 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:Psg1 pf:Ig_3 pf:C1-set pf:SCF pf:EssA pf:EphA2_TM

hcg:128343240 pf:MHC_I pf:MHC_II_alpha pf:MHC_I_3 pf:C1-set pf:Ig_2 pf:PepSY_TM pf:DUF202 pf:Syndecan pf:DUF4405 pf:Gram_pos_anchor

hle:104834124 pf:MHC_I pf:MHC_II_alpha pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:ig pf:I-set pf:Psg1 pf:Vpu pf:FixQ

hrt:120747691 pf:MHC_I pf:Ig_3 pf:C1-set pf:Psg1 pf:Syndecan pf:Cadherin_C_2

lmut:125686244 pf:MHC_I pf:MHC_II_beta pf:MHC_I_3 pf:MHC_II_beta pf:Ig_3 pf:I-set pf:C1-set pf:ig pf:Ig_2 pf:PTCRA pf:Phage_fiber_C pf:DUF5353 pf:FeoB_associated

lruf:124528160 pf:MHC_I pf:Darcynin pf:C2-set_2 pf:Ig_3 pf:C1-set pf:ig pf:Ig_2 pf:MHC_I_C

mcc:100426197 pf:MHC_I pf:Ig_3 pf:C2-set_2 pf:C1-set pf:ig pf:HCV_NS4a pf:MHC_I_C

mdo:100024719 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C2-set_2 pf:C1-set pf:Ig_2 pf:MHC_I_C

mgp:104916485 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:I-set pf:C1-set pf:ig pf:Ig_2 pf:PTCRA pf:FeoB_associated

mlf:102433344 pf:MHC_I pf:Ig_3 pf:C2-set_2 pf:C1-set pf:Ig_2 pf:ig pf:MHC_I_C

mlk:131834384 pf:MHC_I pf:C2-set_2 pf:C1-set pf:Ig_3 pf:ig pf:stn_TNFRSF12A pf:MHC_I_C

mmea:130587875 pf:MHC_I pf:DUF5511 pf:MHC_I_3 pf:MHC_II_beta pf:C1-set pf:ig pf:Psg1

mmyo:118655123 pf:MHC_I pf:Ig_3 pf:C2-set_2 pf:C1-set pf:Ig_2 pf:ig pf:MHC_I_C

mni:105466487 pf:MHC_I pf:MATalpha_HMGbox pf:C2-set_2 pf:Ig_3 pf:C1-set pf:ig pf:MHC_I_C

mrv:120393307 pf:MHC_I pf:MHC_I_3 pf:MHC_I_2 pf:Ig_3 pf:ig pf:C1-set pf:Ig_2

mun:110563249 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:I-set

nmel:110406685 pf:MHC_I pf:MHC_II_beta pf:MHC_I_3 pf:HTH_32 pf:Ig_3 pf:C1-set pf:ig pf:CEND1

nnt:104406923 pf:MHC_I pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:Ig_2 pf:ig pf:Psg1 pf:RIFIN pf:DUF6479 pf:Stevor pf:EphA2_TM

npd:112954975 pf:MHC_I pf:MHC_I_3 pf:C2-set_2 pf:Ig_3 pf:ig pf:C1-set pf:Ig_2 pf:Insulin_TMD pf:DUF6479

npo:129512639 pf:MHC_I pf:MHC_I_3 pf:MATalpha_HMGbox pf:C2-set_2 pf:Ig_3 pf:C1-set pf:ig pf:Ig_2 pf:Psg1 pf:VSP pf:DAG1 pf:MHC_I_C

nss:113425375 pf:MHC_I pf:C1-set pf:Ig_2 pf:ig

oga:100956897 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C2-set_2 pf:C1-set pf:ig pf:Ig_2 pf:Psg1 pf:MHC_I_C

oha:104339332 pf:MHC_I pf:RNA_pol_Rpa2_4 pf:MHC_I pf:Ig_3 pf:C1-set pf:Psg1 pf:Trp_oprn_chp

oma:130255441 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:ig pf:C1-set pf:Ig_2 pf:Psg1

otc:121343095 pf:MHC_I pf:Ig_3 pf:ig pf:C1-set

padl:103914226 pf:MHC_II_beta pf:MHC_I pf:MHC_I pf:Ig_3 pf:C1-set pf:Ig_2 pf:ig pf:I-set

panu:101002482 pf:MHC_I pf:Ig_3 pf:C2-set_2 pf:C1-set pf:ig pf:MHC_I_C

pbi:103057400 pf:MHC_I pf:MHC_I_3 pf:ig pf:Ig_2 pf:C1-set pf:Phage_holin_5_2

pcoc:116236755 pf:MHC_I pf:MHC_II_alpha pf:MHC_I_3 pf:MHC_II_beta pf:Ig_3 pf:C2-set_2 pf:Ig_2 pf:ig pf:I-set pf:C1-set pf:CEND1 pf:TctB pf:Insulin_TMD pf:Podoplanin pf:Adeno_E3_CR2 pf:DUF5325

pcri:104025148 pf:MHC_I pf:Ig_3 pf:ig pf:C1-set pf:I-set

pcw:110203128 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C2-set_2 pf:Ig_2 pf:ig pf:C1-set pf:I-set pf:MHC_I_C

pgut:117658380 pf:MHC_I pf:Ig_2 pf:C1-set pf:ig

phi:102113351 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:Psg1 pf:Insulin_TMD

plet:104623202 pf:MHC_I pf:Ig_3 pf:I-set pf:ig pf:C1-set pf:Psg1

plop:125352790 pf:MHC_I pf:Ig_3 pf:C2-set_2 pf:C1-set pf:ig pf:Ig_2 pf:Psg1 pf:MHC_I_C

pmua:114591071 pf:MHC_I pf:MHC_I_3 pf:C1-set pf:MHC_I pf:MHC_I_3 pf:MHC_I_2 pf:C1-set

pmur:107296725 pf:MHC_I pf:MHC_II_alpha pf:C1-set pf:Ig_2 pf:ig

praf:128409440 pf:MHC_I pf:MHC_I_3 pf:C1-set pf:Ig_2 pf:Ig_3 pf:Podoplanin pf:Syndecan pf:DUF4017 pf:Glycophorin_A pf:TM_ErbB1

pteh:111534256 pf:MHC_I pf:C2-set_2 pf:Ig_3 pf:C1-set pf:ig pf:MHC_I_C

ptex:113450374 pf:MHC_I pf:Ig_3 pf:C1-set pf:Ig_2 pf:ig pf:TrbC

pvt:110070500 pf:ESR1_C pf:MHC_I pf:MHC_I_3 pf:C1-set pf:I-set pf:Ig_2 pf:Ig_3 pf:ig pf:Insulin_TMD

rtd:128901664 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:C1-set pf:ig pf:Psg1 pf:Phage_holin_3_6

scam:104152267 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:ig

scan:108963687 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:Ig_3 pf:ig pf:C1-set pf:I-set pf:Psg1

shab:115603445 pf:Gag_p24_C pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:ig pf:Psg1 pf:Phage_holin_2_4

shon:118996659 pf:MHC_I pf:C2-set_2 pf:Ig_3 pf:C1-set pf:Ig_2 pf:ig pf:MHC_I_C

shr:105750614 pf:MHC_I pf:Ig_3 pf:Ig_2 pf:C2-set_2 pf:ig pf:C1-set pf:MHC_I_C

stow:125424436 pf:MHC_I pf:MHC_I_3 pf:C1-set pf:Ig_2 pf:Ig_3 pf:I-set

sund:121923018 pf:MHC_I pf:MHC_I_3 pf:C1-set pf:Ig_2 pf:Ig_3 pf:I-set pf:Insulin_TMD

tala:116963341 pf:MHC_I pf:MHC_I_3 pf:MHC_II_beta pf:C1-set pf:I-set pf:ig pf:Psg1 pf:Insulin_TMD

teo:104372145 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:Ig_2 pf:ig pf:I-set pf:Psg1 pf:LapA_dom pf:PepSY_TM

tgu:100231469 pf:MHC_I pf:MHC_II_alpha pf:Ig_3 pf:Ig_2 pf:C1-set pf:ig

tpai:128074267 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:I-set pf:C1-set pf:Ig_2 pf:ig pf:PTCRA pf:Syndecan pf:DUF5353 pf:FeoB_associated

tst:117878436 pf:Fox-1_C pf:MHC_I pf:YabA pf:MHC_I_3 pf:C1-set pf:Ig_3 pf:ig pf:I-set pf:SCF

vko:123024639 pf:MHC_I pf:MHC_I_3 pf:Ig_3 pf:C1-set pf:Ig_2 pf:I-set pf:Syndecan pf:EphA2_TM

vpc:102541374 pf:MHC_I pf:C2-set_2 pf:C1-set pf:ig pf:Ig_2 pf:Psg1 pf:DUF6676 pf:RAMP4 pf:Pilin_N pf:DUF2627 pf:MHC_I_C

zab:102067888 pf:MHC_I pf:MHC_II_beta pf:MHC_I_3 pf:MHC_II_beta pf:Ig_3 pf:ig pf:C1-set pf:DUF4381

zvi:118081335 pf:dsrm pf:MHC_I pf:MHC_I_3 pf:C1-set pf:Ig_3 pf:Syndecan pf:TM_ErbB1