Search common motifs in selected sequences


  
Motifs : pf:2-Hacid_dh_CD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
 pf:AAA_14AAA domain
 pf:ADH_zinc_NZinc-binding dehydrogenase
 pf:AdoHcyase_NADS-adenosyl-L-homocysteine hydrolase, NAD binding domain
 pf:AlaDh_PNT_CAlanine dehydrogenase/PNT, C-terminal domain
 pf:CYP38_PsbQ-like
 pf:CbiACobQ/CobB/MinD/ParA nucleotide binding domain
 pf:Cytochrom_C552Cytochrome c552
 pf:DUF2326Uncharacterised protein conserved in bacteria (DUF2326)
 pf:DUF364Putative heavy-metal chelation
 pf:DUF3726Protein of unknown function (DUF3726)
 pf:Flexi_CP_NCarlavirus coat
 pf:GelsolinGelsolin repeat
 pf:Glyco_hydro_7Glycosyl hydrolase family 7
 pf:HcgC
 pf:IlvNAcetohydroxy acid isomeroreductase, NADPH-binding domain
 pf:Methyltransf_11Methyltransferase domain
 pf:Methyltransf_23Methyltransferase domain
 pf:MurD-like_N
 pf:Mur_ligaseMur ligase family, catalytic domain
 pf:Mur_ligase_CMur ligase family, glutamate ligase domain
 pf:Mur_ligase_MMur ligase middle domain
 pf:NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenase
 pf:NAD_binding_7Putative NAD(P)-binding
 pf:Oxidored_nitroNitrogenase component 1 type Oxidoreductase
 pf:Oxysterol_BPOxysterol-binding protein
 pf:PGA_capBacterial capsule synthesis protein PGA_cap
 pf:PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit
 pf:Pyr_redoxPyridine nucleotide-disulphide oxidoreductase
 pf:Pyr_redox_3Pyridine nucleotide-disulphide oxidoreductase
 pf:Shikimate_DHShikimate / quinate 5-dehydrogenase
 pf:SsgAStreptomyces sporulation and cell division protein, SsgA
 pf:TPP_enzyme_MThiamine pyrophosphate enzyme, central domain
 pf:Topo-VIb_transTopoisomerase VI B subunit, transducer
 pf:TrkA_NTrkA-N domain
 pf:XdhC_CXdhC Rossmann domain
 pf:adh_shortshort chain dehydrogenase

aamy:GFC30_1419 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:Oxidored_nitro pf:AlaDh_PNT_C pf:MurD-like_N pf:Pyr_redox pf:XdhC_C pf:Mur_ligase_M pf:Mur_ligase_C pf:DUF364 pf:Methyltransf_23

acai:ISX45_02885 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:IlvN pf:MurD-like_N pf:Pyr_redox pf:TrkA_N pf:Methyltransf_11 pf:Mur_ligase pf:Mur_ligase_M pf:DUF2326 pf:Mur_ligase_C pf:DUF364

acit:HPK19_10035 pf:Shikimate_DH pf:AlaDh_PNT_C pf:2-Hacid_dh_C pf:IlvN pf:MurD-like_N pf:adh_short pf:Mur_ligase_M pf:Mur_ligase_C pf:TPP_enzyme_M

afl:Aflv_1832 pf:AdoHcyase_NAD pf:2-Hacid_dh_C pf:IlvN pf:MurD-like_N pf:AlaDh_PNT_C pf:Mur_ligase_M pf:Mur_ligase_C

alkl:MM271_17125 pf:Pyr_redox_3 pf:MurD-like_N pf:Mur_ligase_M pf:Glyco_hydro_7 pf:Cytochrom_C552 pf:Mur_ligase_C

and:GRQ40_06220 pf:Pyr_redox_3 pf:Oxidored_nitro pf:2-Hacid_dh_C pf:NAD_binding_7 pf:MurD-like_N pf:AlaDh_PNT_C pf:Pyr_redox pf:TrkA_N pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C pf:DUF364 pf:PTS_IIB

anl:GFC29_301 pf:Pyr_redox_3 pf:AdoHcyase_NAD pf:2-Hacid_dh_C pf:Oxidored_nitro pf:NAD_binding_7 pf:MurD-like_N pf:AlaDh_PNT_C pf:Pyr_redox pf:TrkA_N pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C pf:DUF364 pf:PTS_IIB

anm:GFC28_1326 pf:Pyr_redox_3 pf:AdoHcyase_NAD pf:2-Hacid_dh_C pf:Oxidored_nitro pf:NAD_binding_7 pf:MurD-like_N pf:AlaDh_PNT_C pf:Pyr_redox pf:TrkA_N pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C pf:DUF364 pf:PTS_IIB

baca:FAY30_08715 pf:Pyr_redox_3 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bacl:BS34A_16820 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bacq:DOE78_07710 pf:Pyr_redox_3 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Gelsolin pf:Mur_ligase_C

bard:QRY57_19335 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bcab:EFK13_08425 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bcal:CWI35_04625 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

bcef:BcrFT9_03030 pf:AlaDh_PNT_C pf:2-Hacid_dh_C pf:HcgC pf:MurD-like_N pf:Mur_ligase pf:SsgA pf:Mur_ligase_M pf:Mur_ligase_C

bcir:C2I06_02960 pf:MurD-like_N pf:Mur_ligase_M pf:CbiA pf:Mur_ligase_C

bcoh:BC6307_13055 pf:2-Hacid_dh_C pf:AdoHcyase_NAD pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

bda:FSZ17_09380 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:MurD-like_N pf:Pyr_redox pf:Mur_ligase_M pf:Mur_ligase_C pf:PTS_IIB

bfx:BC359_06345 pf:AlaDh_PNT_C pf:2-Hacid_dh_C pf:MurD-like_N pf:XdhC_C pf:ADH_zinc_N pf:Mur_ligase_M pf:Mur_ligase_C

bgi:BGM20_01990 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bhk:B4U37_09480 pf:Shikimate_DH pf:2-Hacid_dh_C pf:AdoHcyase_NAD pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

bht:DIC78_01795 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

biq:AN935_07950 pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

bit:BIS30_18440 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bmd:BMD_4265 pf:2-Hacid_dh_C pf:AdoHcyase_NAD pf:IlvN pf:AlaDh_PNT_C pf:MurD-like_N pf:XdhC_C pf:ADH_zinc_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bmeg:BG04_1196 pf:Shikimate_DH pf:2-Hacid_dh_C pf:AdoHcyase_NAD pf:IlvN pf:AlaDh_PNT_C pf:MurD-like_N pf:XdhC_C pf:TrkA_N pf:ADH_zinc_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bmet:BMMGA3_05660 pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

bmh:BMWSH_0949 pf:2-Hacid_dh_C pf:AdoHcyase_NAD pf:IlvN pf:AlaDh_PNT_C pf:MurD-like_N pf:XdhC_C pf:ADH_zinc_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bmq:BMQ_4277 pf:2-Hacid_dh_C pf:AdoHcyase_NAD pf:IlvN pf:AlaDh_PNT_C pf:MurD-like_N pf:XdhC_C pf:ADH_zinc_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bmur:ABE28_007510 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bmyc:DJ92_1003 pf:AlaDh_PNT_C pf:2-Hacid_dh_C pf:MurD-like_N pf:Mur_ligase pf:SsgA pf:Mur_ligase_M pf:Mur_ligase_C

bnt:GSN03_18495 pf:AlaDh_PNT_C pf:2-Hacid_dh_C pf:MurD-like_N pf:Mur_ligase pf:SsgA pf:Mur_ligase_M pf:Mur_ligase_C pf:PTS_IIB

bon:A361_09195 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:Flexi_CP_N

bou:I5818_16270 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

bry:M0696_08280 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bsh:BSU6051_15200 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bsj:UP17_07310 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bsl:A7A1_0506 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bsm:BSM4216_1486 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:Pyr_redox pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bsn:BSn5_19705 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bso:BSNT_08031 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bsp:U712_08010 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bsq:B657_15200 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bsr:I33_1706 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bss:BSUW23_07830 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bst:GYO_1866 pf:IlvN pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Oxysterol_BP pf:Mur_ligase_C

bsu:BSU15200 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bsul:BSUA_01650 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bsus:Q433_08720 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bsut:BSUB_01650 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

bteq:G4P54_07955 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:CYP38_PsbQ-like

bwe:BcerKBAB4_3739 pf:AlaDh_PNT_C pf:2-Hacid_dh_C pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

bww:bwei_1042 pf:AlaDh_PNT_C pf:2-Hacid_dh_C pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

cfir:NAF01_08700 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

cgot:J1899_09165 pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

cpss:M5V91_12360 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:Flexi_CP_N

csoa:LIS82_10775 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:PTS_IIB

cspg:LS684_07730 pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

csua:IM538_10370 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:MurD-like_N pf:AlaDh_PNT_C pf:TrkA_N pf:Mur_ligase_M pf:Mur_ligase_C pf:AAA_14

ecto:MUG87_06335 pf:AlaDh_PNT_C pf:2-Hacid_dh_C pf:AdoHcyase_NAD pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C pf:PTS_IIB

fec:QNH15_10650 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AdoHcyase_NAD pf:MurD-like_N pf:AlaDh_PNT_C pf:TrkA_N pf:Mur_ligase_M pf:Mur_ligase_C pf:PTS_IIB

gaj:MY490_15150 pf:Shikimate_DH pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:IlvN pf:MurD-like_N pf:adh_short pf:TrkA_N pf:ADH_zinc_N pf:Mur_ligase_M pf:Mur_ligase_C

gct:GC56T3_2455 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gea:GARCT_01138 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:TrkA_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

gej:A0V43_02755 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gel:IB49_15860 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:TrkA_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

ggh:GHH_c10550 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gjf:M493_05680 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

gka:GK1118 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gli:GLN3_15930 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:TrkA_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

gmc:GY4MC1_2778 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:TrkA_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

gse:GT50_03020 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gst:HW35_16320 pf:MurD-like_N pf:Mur_ligase pf:Topo-VIb_trans pf:Mur_ligase_M pf:Mur_ligase_C

gte:GTCCBUS3UF5_13030 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gth:Geoth_2798 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:TrkA_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:DUF364

gtk:GT3570_05285 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gtm:GT3921_13900 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gtn:GTNG_0983 pf:MurD-like_N pf:2-Hacid_dh_C pf:Mur_ligase_M pf:Mur_ligase_C

gwc:GWCH70_1019 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:DUF364

gya:GYMC52_1018 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gyc:GYMC61_1891 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

gza:IC807_01255 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:NAD_binding_7 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

mdg:K8L98_10475 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:NAD_binding_7 pf:MurD-like_N pf:adh_short pf:Pyr_redox pf:TrkA_N pf:XdhC_C pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

meku:HUW50_19275 pf:2-Hacid_dh_C pf:MurD-like_N pf:AlaDh_PNT_C pf:Pyr_redox pf:TrkA_N pf:NAD_binding_2 pf:Mur_ligase_M pf:Mur_ligase_C

mjo:FOF60_08265 pf:Pyr_redox_3 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

msem:GMB29_17905 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:MurD-like_N pf:AlaDh_PNT_C pf:adh_short pf:Pyr_redox pf:TrkA_N pf:ADH_zinc_N pf:Mur_ligase_M pf:Mur_ligase_C pf:PTS_IIB

msut:LC048_13385 pf:Pyr_redox_3 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

ncm:QNK12_08630 pf:Pyr_redox_3 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

ndt:L1999_08230 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

nmk:CHR53_09230 pf:Pyr_redox_3 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:DUF3726 pf:Mur_ligase_C

nnv:QNH39_09200 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C

ntx:NQZ71_15365 pf:Pyr_redox_3 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

parg:PspKH34_27010 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:TrkA_N pf:Mur_ligase pf:Mur_ligase_M pf:DUF2326 pf:Mur_ligase_C pf:DUF364

pbut:DTO10_20075 pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

pcal:BV455_00745 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase_M pf:Cytochrom_C552 pf:Mur_ligase_C pf:DUF364

pfri:L8956_07940 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

pks:IE339_17660 pf:AlaDh_PNT_C pf:2-Hacid_dh_C pf:MurD-like_N pf:XdhC_C pf:Mur_ligase pf:PGA_cap pf:Mur_ligase_M pf:Mur_ligase_C pf:PTS_IIB

ppsr:I6J18_07135 pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C

prd:F7984_06360 pf:MurD-like_N pf:Mur_ligase_M pf:Mur_ligase_C

ptb:DER53_09670 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:IlvN pf:AlaDh_PNT_C pf:MurD-like_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C pf:DUF364

ptl:AOT13_08600 pf:Pyr_redox_3 pf:2-Hacid_dh_C pf:AlaDh_PNT_C pf:MurD-like_N pf:TrkA_N pf:Mur_ligase pf:Mur_ligase_M pf:Mur_ligase_C