Search common motifs in selected sequences


  
Motifs : pf:2-Hacid_dhD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
 pf:ABC_sub_bindABC transporter substrate binding protein
 pf:AIRSAIR synthase related protein, N-terminal domain
 pf:Bflower_2
 pf:BmpABC transporter substrate-binding protein PnrA-like
 pf:CENP-B_NCENP-B N-terminal DNA-binding domain
 pf:CbiJPrecorrin-6x reductase CbiJ/CobK
 pf:CoA_binding_3CoA-binding domain
 pf:CroCro
 pf:CrpBacterial regulatory proteins, crp family
 pf:DD_K
 pf:DUF1331
 pf:DUF2058Uncharacterized protein conserved in bacteria (DUF2058)
 pf:DUF2529Domain of unknown function (DUF2529)
 pf:DUF3853Protein of unknown function (DUF3853)
 pf:DUF434Protein of unknown function (DUF434)
 pf:DUF5319
 pf:DUF5634
 pf:Fe-ADH_2Iron-containing alcohol dehydrogenase
 pf:Fe_dep_repressIron dependent repressor, N-terminal DNA binding domain
 pf:GHL6Hypothetical glycosyl hydrolase 6
 pf:GerEBacterial regulatory proteins, luxR family
 pf:HNH_repeat
 pf:HTH_10HTH DNA binding domain
 pf:HTH_11HTH domain
 pf:HTH_15Helix-turn-helix domain of alkylmercury lyase
 pf:HTH_17Helix-turn-helix domain
 pf:HTH_19Helix-turn-helix domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_24Winged helix-turn-helix DNA-binding
 pf:HTH_26Cro/C1-type HTH DNA-binding domain
 pf:HTH_28Helix-turn-helix domain
 pf:HTH_29Winged helix-turn helix
 pf:HTH_3Helix-turn-helix
 pf:HTH_31Helix-turn-helix domain
 pf:HTH_35Winged helix-turn-helix DNA-binding
 pf:HTH_38Helix-turn-helix domain
 pf:HTH_5Bacterial regulatory protein, arsR family
 pf:HTH_6Helix-turn-helix domain, rpiR family
 pf:HTH_7Helix-turn-helix domain of resolvase
 pf:HTH_AraCBacterial regulatory helix-turn-helix proteins, AraC family
 pf:HTH_AsnC-typeAsnC-type helix-turn-helix domain
 pf:HTH_Crp_2Crp-like helix-turn-helix domain
 pf:HTH_IclRIclR helix-turn-helix domain
 pf:HTH_Tnp_ISL3Helix-turn-helix domain of transposase family ISL3
 pf:HTH_Tnp_Tc3_2Transposase
 pf:IF2_NTranslation initiation factor IF-2, N-terminal region
 pf:LacIBacterial regulatory proteins, lacI family
 pf:Leader_ErmErm Leader peptide
 pf:Linker_histonelinker histone H1 and H5 family
 pf:Lipase_bact_NBacterial virulence factor lipase N-terminal
 pf:MEF2_bindingMEF2 binding
 pf:Mad3_BUB1_IIMad3/BUB1 homology region 2
 pf:MarRMarR family
 pf:MarR_2MarR family
 pf:MerRMerR family regulatory protein
 pf:MgaMga helix-turn-helix domain
 pf:Myb_DNA-bindingMyb-like DNA-binding domain
 pf:NLBHNeuraminyllactose-binding hemagglutinin precursor (NLBH)
 pf:OmpHOuter membrane protein (OmpH-like)
 pf:Orthopox_A47Orthopoxvirus A47 protein
 pf:PASTAPASTA domain
 pf:PF0610-like_N
 pf:PFKPhosphofructokinase
 pf:Parvo_NS1Parvovirus non-structural protein NS1
 pf:Peripla_BP_1Periplasmic binding proteins and sugar binding domain of LacI family
 pf:Peripla_BP_3Periplasmic binding protein-like domain
 pf:Peripla_BP_4Periplasmic binding protein domain
 pf:Peripla_BP_6Periplasmic binding protein
 pf:Rav1p_CRAVE protein 1 C terminal
 pf:Sigma54_DBDSigma-54, DNA binding domain
 pf:Sigma70_r3Sigma-70 region 3
 pf:Sigma70_r4Sigma-70, region 4
 pf:Sigma70_r4_2Sigma-70, region 4
 pf:SpoIIIDStage III sporulation protein D
 pf:TetR_NBacterial regulatory proteins, tetR family
 pf:TnsDTn7-like transposition protein D
 pf:TrmBSugar-specific transcriptional regulator TrmB
 pf:Trp_repressorTrp repressor protein
 pf:Xre-like-HTH

aamy:GFC30_400 pf:HTH_Tnp_ISL3 pf:SpoIIID pf:LacI pf:HTH_38 pf:HTH_7 pf:HTH_3 pf:MerR pf:HTH_31 pf:Trp_repressor pf:HTH_23 pf:TnsD pf:DUF3853 pf:HTH_Crp_2 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:Peripla_BP_3

afl:Aflv_2673 pf:HTH_Tnp_ISL3 pf:LacI pf:HTH_38 pf:HTH_7 pf:HTH_31 pf:MerR pf:HTH_3 pf:Trp_repressor pf:TnsD pf:HTH_23 pf:DUF3853 pf:HTH_Crp_2 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:CbiJ pf:Peripla_BP_6 pf:Peripla_BP_3

aft:BBF96_10370 pf:TnsD pf:HTH_6 pf:HTH_11 pf:Trp_repressor pf:HTH_24 pf:HTH_10 pf:TetR_N pf:Sigma54_DBD pf:HTH_23 pf:HTH_Crp_2 pf:MarR pf:MarR_2 pf:LacI pf:HTH_7 pf:HTH_3 pf:HTH_Tnp_ISL3 pf:HTH_38 pf:CENP-B_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:CoA_binding_3 pf:Peripla_BP_3

amij:EQM06_09145 pf:Trp_repressor pf:HTH_3 pf:HTH_10 pf:TnsD pf:MarR pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

and:GRQ40_17395 pf:HTH_Tnp_ISL3 pf:LacI pf:HTH_38 pf:HTH_7 pf:HTH_3 pf:MerR pf:HTH_31 pf:Trp_repressor pf:HTH_23 pf:TnsD pf:DUF3853 pf:HTH_Crp_2 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:Peripla_BP_3

anl:GFC29_2573 pf:HTH_Tnp_ISL3 pf:LacI pf:HTH_38 pf:HTH_7 pf:HTH_3 pf:MerR pf:HTH_31 pf:Trp_repressor pf:HTH_23 pf:TnsD pf:DUF3853 pf:HTH_Crp_2 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:Peripla_BP_3

anm:GFC28_2861 pf:HTH_Tnp_ISL3 pf:LacI pf:HTH_38 pf:HTH_7 pf:HTH_3 pf:MerR pf:HTH_31 pf:Trp_repressor pf:HTH_23 pf:TnsD pf:DUF3853 pf:HTH_Crp_2 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:Peripla_BP_3

asoc:CB4_03676 pf:HTH_Tnp_ISL3 pf:LacI pf:MerR pf:HTH_23 pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

bah:BAMEG_3922 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_31 pf:DUF3853 pf:TnsD pf:HTH_26 pf:HTH_17 pf:HTH_IclR pf:HTH_28 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bai:BAA_0748 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_31 pf:DUF3853 pf:TnsD pf:HTH_26 pf:HTH_17 pf:HTH_IclR pf:HTH_28 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bal:BACI_c06740 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

balu:QRY64_05665 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

ban:BA_0664 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_31 pf:DUF3853 pf:TnsD pf:HTH_26 pf:HTH_17 pf:HTH_IclR pf:HTH_28 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

banh:HYU01_03585 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_31 pf:DUF3853 pf:TnsD pf:HTH_26 pf:HTH_17 pf:HTH_IclR pf:HTH_28 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

banr:A16R_07330 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_31 pf:DUF3853 pf:TnsD pf:HTH_26 pf:HTH_17 pf:HTH_IclR pf:HTH_28 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bans:BAPAT_0642 pf:HTH_3 pf:HTH_31 pf:HTH_Tnp_Tc3_2 pf:HTH_26 pf:HTH_35 pf:HTH_28 pf:HTH_10 pf:HTH_Tnp_ISL3 pf:DUF3853 pf:HTH_IclR pf:TnsD pf:HTH_29 pf:HTH_6 pf:HTH_7 pf:MarR_2 pf:DD_K pf:LacI pf:HTH_38 pf:HTH_23 pf:MerR pf:HTH_17 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bant:A16_57815 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_31 pf:DUF3853 pf:TnsD pf:HTH_26 pf:HTH_17 pf:HTH_IclR pf:HTH_28 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

banv:DJ46_5123 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_31 pf:DUF3853 pf:TnsD pf:HTH_26 pf:HTH_17 pf:HTH_IclR pf:HTH_28 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bar:GBAA_0664 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_31 pf:DUF3853 pf:TnsD pf:HTH_26 pf:HTH_17 pf:HTH_IclR pf:HTH_28 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bard:QRY57_05115 pf:HTH_Tnp_ISL3 pf:DD_K pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:DUF3853 pf:HTH_31 pf:HTH_26 pf:TnsD pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bat:BAS0631 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_31 pf:DUF3853 pf:TnsD pf:HTH_26 pf:HTH_17 pf:HTH_IclR pf:HTH_28 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bax:H9401_0636 pf:HTH_3 pf:HTH_31 pf:HTH_Tnp_Tc3_2 pf:HTH_26 pf:HTH_35 pf:HTH_28 pf:HTH_10 pf:HTH_Tnp_ISL3 pf:DUF3853 pf:HTH_IclR pf:TnsD pf:HTH_29 pf:HTH_6 pf:HTH_7 pf:MarR_2 pf:DD_K pf:LacI pf:HTH_38 pf:HTH_23 pf:MerR pf:HTH_17 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bca:BCE_0732 pf:HTH_Tnp_ISL3 pf:DD_K pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bce:BC0659 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:DUF3853 pf:HTH_26 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bcef:BcrFT9_00605 pf:HTH_Tnp_ISL3 pf:DD_K pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bcer:BCK_04825 pf:HTH_Tnp_ISL3 pf:DD_K pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bcf:bcf_03410 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bcg:BCG9842_B4642 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bcq:BCQ_0732 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bcr:BCAH187_A0793 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bcu:BCAH820_0721 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bcx:BCA_0702 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bcz:BCE33L0574 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bmob:MLA2C4_03505 pf:HTH_Tnp_ISL3 pf:DD_K pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bmyo:BG05_5262 pf:HTH_Tnp_ISL3 pf:DD_K pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bnc:BCN_0641 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bpab:PSE45_20750 pf:MarR pf:TetR_N pf:HTH_6 pf:HTH_23 pf:HTH_3 pf:HTH_26 pf:HTH_7 pf:MarR_2 pf:HTH_11 pf:HTH_24 pf:Sigma54_DBD pf:HTH_Crp_2 pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_38 pf:Trp_repressor pf:Peripla_BP_1 pf:AIRS pf:Peripla_BP_4 pf:Peripla_BP_3

bpac:LMD38_22745 pf:HTH_Tnp_ISL3 pf:DD_K pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bpan:NLJ82_03550 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bshi:LGQ02_19030 pf:HTH_3 pf:HTH_11 pf:MarR pf:HTH_Crp_2 pf:HTH_24 pf:HTH_23 pf:HTH_7 pf:TnsD pf:MarR_2 pf:Trp_repressor pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_38 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Bflower_2 pf:Peripla_BP_3

btb:BMB171_C0578 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:DUF3853 pf:HTH_26 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

btf:YBT020_03590 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bti:BTG_17840 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

btk:BT9727_0575 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

btl:BALH_0606 pf:HTH_3 pf:HTH_7 pf:HTH_31 pf:HTH_26 pf:HTH_Tnp_Tc3_2 pf:DUF3853 pf:HTH_IclR pf:HTH_10 pf:HTH_Tnp_ISL3 pf:HTH_28 pf:TnsD pf:HTH_6 pf:DD_K pf:LacI pf:HTH_38 pf:HTH_23 pf:MerR pf:HTH_Crp_2 pf:HTH_17 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

btm:MC28_5387 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

btn:BTF1_01025 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

btro:FJR70_25585 pf:HTH_Tnp_ISL3 pf:DD_K pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

btw:BF38_1911 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bty:Btoyo_3337 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

bwd:CT694_03745 pf:HTH_Tnp_ISL3 pf:DD_K pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:HTH_23 pf:MerR pf:HTH_26 pf:DUF3853 pf:TnsD pf:HTH_31 pf:HTH_17 pf:HTH_38 pf:HTH_Crp_2 pf:Crp pf:Peripla_BP_1 pf:Peripla_BP_4 pf:OmpH pf:Peripla_BP_3

cale:FDN13_05465 pf:HTH_3 pf:TetR_N pf:HTH_10 pf:HTH_Tnp_ISL3 pf:HTH_7 pf:MarR_2 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

carg:RSJ17_07580 pf:HTH_6 pf:HTH_10 pf:TnsD pf:Trp_repressor pf:HTH_3 pf:HTH_24 pf:HTH_11 pf:LacI pf:HTH_Tnp_ISL3 pf:MarR pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

cbar:PATL70BA_2152 pf:HTH_Crp_2 pf:HTH_23 pf:LacI pf:Orthopox_A47 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

cbei:LF65_03960 pf:Sigma54_DBD pf:TetR_N pf:SpoIIID pf:HTH_24 pf:HTH_3 pf:HTH_10 pf:HTH_Tnp_ISL3 pf:HTH_11 pf:Fe_dep_repress pf:MarR pf:MarR_2 pf:HTH_AsnC-type pf:HTH_23 pf:LacI pf:GerE pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

cbn:CbC4_1908 pf:HTH_10 pf:HTH_3 pf:TetR_N pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

cbut:ATN24_18375 pf:HTH_24 pf:HTH_AsnC-type pf:HTH_3 pf:HTH_10 pf:TetR_N pf:Fe_dep_repress pf:HTH_7 pf:Sigma54_DBD pf:MarR_2 pf:HTH_Crp_2 pf:HTH_11 pf:HTH_23 pf:MarR pf:Sigma70_r4 pf:LacI pf:HTH_Tnp_ISL3 pf:GerE pf:MEF2_binding pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PFK pf:Peripla_BP_3

cck:Ccar_20305 pf:TetR_N pf:HTH_10 pf:Fe_dep_repress pf:MarR_2 pf:HTH_Crp_2 pf:LacI pf:HTH_3 pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

ccl:Clocl_2436 pf:HTH_26 pf:HTH_3 pf:HTH_Crp_2 pf:HTH_7 pf:MarR_2 pf:MarR pf:HTH_23 pf:HTH_24 pf:HTH_11 pf:Sigma54_DBD pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_38 pf:HTH_IclR pf:HTH_17 pf:CENP-B_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

ceu:A7L45_18490 pf:TetR_N pf:Sigma54_DBD pf:SpoIIID pf:HTH_26 pf:HTH_24 pf:HTH_3 pf:HTH_10 pf:HTH_Tnp_ISL3 pf:HTH_11 pf:MarR pf:HTH_AsnC-type pf:MarR_2 pf:HTH_23 pf:HTH_Crp_2 pf:LacI pf:GerE pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

cgel:psyc5s11_00750 pf:Sigma54_DBD pf:Cro pf:HTH_3 pf:HTH_10 pf:HTH_19 pf:SpoIIID pf:HTH_24 pf:TetR_N pf:HTH_Tnp_ISL3 pf:HTH_11 pf:MarR pf:MarR_2 pf:HTH_AsnC-type pf:HTH_23 pf:LacI pf:GerE pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:NLBH pf:PFK pf:Peripla_BP_3

cno:NT01CX_0161 pf:Sigma54_DBD pf:TetR_N pf:HTH_3 pf:HTH_10 pf:MarR_2 pf:HTH_IclR pf:HTH_Crp_2 pf:MarR pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

cpo:COPRO5265_1470 pf:HTH_Tnp_ISL3 pf:LacI pf:HTH_26 pf:MerR pf:HTH_23 pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:DUF1331 pf:Peripla_BP_3

cras:KVH43_00115 pf:HTH_3 pf:HTH_Crp_2 pf:HTH_24 pf:TnsD pf:HTH_10 pf:HTH_7 pf:MarR pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

crs:FQB35_00605 pf:HTH_Crp_2 pf:HTH_26 pf:HTH_10 pf:TnsD pf:Xre-like-HTH pf:HTH_3 pf:HTH_23 pf:MarR_2 pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_38 pf:HTH_7 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:DUF2058 pf:Peripla_BP_3 pf:Mad3_BUB1_II

cspo:QNI18_02075 pf:SpoIIID pf:HTH_Crp_2 pf:HTH_3 pf:HTH_26 pf:HTH_19 pf:HTH_10 pf:HTH_7 pf:HTH_24 pf:HTH_23 pf:TnsD pf:MarR_2 pf:MarR pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_38 pf:Parvo_NS1 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:DUF434 pf:Peripla_BP_3

csq:CSCA_4199 pf:TetR_N pf:HTH_10 pf:HTH_3 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

cst:CLOST_2415 pf:HTH_Crp_2 pf:TetR_N pf:HTH_6 pf:HTH_3 pf:HTH_31 pf:LacI pf:Lipase_bact_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

drg:H9K76_01645 pf:HTH_Tnp_ISL3 pf:HTH_3 pf:DUF3853 pf:HTH_7 pf:LacI pf:HTH_31 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

eac:EAL2_c14070 pf:HTH_3 pf:HTH_26 pf:HTH_Crp_2 pf:HTH_23 pf:MarR_2 pf:HTH_24 pf:HTH_7 pf:HTH_AsnC-type pf:HTH_11 pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_38 pf:MerR pf:CENP-B_N pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:ABC_sub_bind

gjf:M493_16900 pf:HTH_Tnp_ISL3 pf:TetR_N pf:SpoIIID pf:LacI pf:HTH_38 pf:HTH_3 pf:HTH_31 pf:HTH_7 pf:HTH_23 pf:TnsD pf:MerR pf:Trp_repressor pf:HTH_26 pf:HTH_IclR pf:HTH_24 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

gtn:GTNG_3175 pf:HTH_Tnp_ISL3 pf:TetR_N pf:Linker_histone pf:LacI pf:HTH_38 pf:HTH_3 pf:HTH_7 pf:HTH_31 pf:HTH_23 pf:Trp_repressor pf:MerR pf:HTH_26 pf:TnsD pf:HTH_IclR pf:HTH_24 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

hhw:NCTC503_00260 pf:HTH_26 pf:HTH_Crp_2 pf:Trp_repressor pf:TetR_N pf:HTH_3 pf:HTH_23 pf:MarR_2 pf:LacI pf:HTH_7 pf:MarR pf:Sigma70_r3 pf:Rav1p_C pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:2-Hacid_dh

hor:Hore_04570 pf:HTH_Crp_2 pf:HTH_11 pf:MarR pf:Sigma54_DBD pf:HTH_15 pf:TnsD pf:HTH_26 pf:TetR_N pf:LacI pf:HTH_3 pf:HTH_38 pf:HTH_7 pf:HTH_Tnp_ISL3 pf:HTH_24 pf:Trp_repressor pf:HTH_23 pf:CENP-B_N pf:PASTA pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:DUF5634

hpk:Hprae_1127 pf:HTH_26 pf:IF2_N pf:TnsD pf:TetR_N pf:HTH_3 pf:HTH_24 pf:HTH_11 pf:MarR pf:Trp_repressor pf:HTH_23 pf:Sigma54_DBD pf:LacI pf:HTH_7 pf:HTH_Tnp_ISL3 pf:HTH_38 pf:CENP-B_N pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Mga pf:Peripla_BP_3

hprf:HLPR_08260 pf:HTH_3 pf:SpoIIID pf:HTH_26 pf:HTH_19 pf:HTH_23 pf:MarR_2 pf:MarR pf:LacI pf:HTH_Tnp_ISL3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

lek:hrd7_05420 pf:HTH_26 pf:TetR_N pf:SpoIIID pf:HTH_Crp_2 pf:HTH_10 pf:HTH_6 pf:HTH_IclR pf:MarR_2 pf:HTH_23 pf:HTH_31 pf:HTH_3 pf:MarR pf:HTH_29 pf:HTH_28 pf:TrmB pf:HTH_24 pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_7 pf:HTH_38 pf:HTH_5 pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

llb:R6U77_01425 pf:IF2_N pf:HTH_AraC pf:TetR_N pf:HTH_Tnp_ISL3 pf:HTH_23 pf:HTH_24 pf:HTH_7 pf:HTH_19 pf:HTH_26 pf:HTH_3 pf:TnsD pf:Trp_repressor pf:HTH_10 pf:MarR pf:HTH_Crp_2 pf:MarR_2 pf:HTH_IclR pf:LacI pf:HTH_38 pf:CENP-B_N pf:Leader_Erm pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Bmp pf:Peripla_BP_3

mta:Moth_2273 pf:HTH_Tnp_ISL3 pf:HTH_23 pf:HTH_17 pf:HTH_IclR pf:HTH_10 pf:MarR_2 pf:TetR_N pf:LacI pf:HTH_31 pf:HTH_3 pf:HTH_7 pf:HTH_AraC pf:HTH_38 pf:HTH_26 pf:HTH_Crp_2 pf:Xre-like-HTH pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Fe-ADH_2 pf:Peripla_BP_3

nth:Nther_2690 pf:HTH_10 pf:TetR_N pf:LacI pf:HTH_19 pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:HNH_repeat

ntm:BTDUT50_02640 pf:HTH_Tnp_ISL3 pf:LacI pf:HTH_38 pf:HTH_7 pf:HTH_3 pf:HTH_31 pf:MerR pf:Trp_repressor pf:HTH_23 pf:TnsD pf:DUF3853 pf:HTH_Crp_2 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:Peripla_BP_3

ocw:OW730_09855 pf:Sigma54_DBD pf:HTH_10 pf:TetR_N pf:MarR_2 pf:LacI pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pbif:KXZ80_07215 pf:HTH_Tnp_ISL3 pf:HTH_10 pf:MarR_2 pf:HTH_23 pf:HTH_17 pf:TetR_N pf:HTH_IclR pf:LacI pf:HTH_3 pf:HTH_Crp_2 pf:HTH_7 pf:HTH_26 pf:TrmB pf:HTH_31 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pcal:BV455_02032 pf:HTH_Tnp_ISL3 pf:LacI pf:HTH_3 pf:HTH_38 pf:HTH_31 pf:HTH_7 pf:HTH_23 pf:TnsD pf:MerR pf:Trp_repressor pf:HTH_26 pf:DUF3853 pf:HTH_Crp_2 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:GHL6

plig:NAG76_09620 pf:HTH_Tnp_ISL3 pf:HTH_6 pf:LacI pf:HTH_3 pf:HTH_7 pf:MerR pf:HTH_26 pf:HTH_23 pf:HTH_38 pf:TnsD pf:HTH_Crp_2 pf:Trp_repressor pf:Peripla_BP_1 pf:Peripla_BP_4 pf:DUF2529 pf:Peripla_BP_3

pow:IJ21_01200 pf:HTH_3 pf:DUF3853 pf:HTH_Crp_2 pf:TnsD pf:HTH_23 pf:HTH_24 pf:MarR pf:MarR_2 pf:LacI pf:HTH_Tnp_ISL3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

proq:P6M73_08380 pf:HTH_Crp_2 pf:HTH_26 pf:HTH_10 pf:LacI pf:HTH_3 pf:HTH_38 pf:HTH_23 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

ssm:Spirs_1169 pf:HTH_Crp_2 pf:HTH_26 pf:HTH_23 pf:HTH_3 pf:Crp pf:HTH_24 pf:HTH_AraC pf:MarR_2 pf:HTH_28 pf:HTH_31 pf:Trp_repressor pf:HTH_IclR pf:Sigma54_DBD pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_38 pf:DUF3853 pf:HTH_29 pf:HTH_7 pf:Sigma70_r4_2 pf:HTH_17 pf:MerR pf:CENP-B_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

tbo:Thebr_2088 pf:HTH_23 pf:HTH_Crp_2 pf:MarR pf:Sigma54_DBD pf:HTH_26 pf:TnsD pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_7 pf:HTH_3 pf:HTH_24 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

teb:T8CH_2383 pf:Xre-like-HTH pf:HTH_3 pf:HTH_23 pf:HTH_7 pf:HTH_24 pf:HTH_26 pf:HTH_19 pf:HTH_38 pf:TnsD pf:MarR pf:HTH_31 pf:HTH_10 pf:HTH_Crp_2 pf:MarR_2 pf:LacI pf:HTH_Tnp_ISL3 pf:MerR pf:CENP-B_N pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

tex:Teth514_0161 pf:HTH_23 pf:HTH_Crp_2 pf:HTH_26 pf:MarR pf:Sigma54_DBD pf:TnsD pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_7 pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

tfr:BR63_13985 pf:TetR_N pf:HTH_26 pf:MarR_2 pf:HTH_IclR pf:HTH_Crp_2 pf:MarR pf:TnsD pf:LacI pf:HTH_23 pf:HTH_Tnp_ISL3 pf:HTH_3 pf:HTH_7 pf:Trp_repressor pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

thx:Thet_0198 pf:HTH_23 pf:HTH_Crp_2 pf:HTH_26 pf:MarR pf:Sigma54_DBD pf:TnsD pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_7 pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

tiz:RBU61_16825 pf:HTH_Crp_2 pf:HTH_3 pf:HTH_26 pf:HTH_31 pf:TetR_N pf:MarR_2 pf:LacI pf:HTH_23 pf:HTH_Tnp_ISL3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

tki:TKV_c08400 pf:HTH_Tnp_ISL3 pf:TetR_N pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:DUF5319 pf:Peripla_BP_3

tmt:Tmath_0260 pf:HTH_23 pf:HTH_Crp_2 pf:HTH_26 pf:MarR pf:Sigma54_DBD pf:TnsD pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_7 pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

tpd:Teth39_2043 pf:HTH_23 pf:HTH_Crp_2 pf:MarR pf:Sigma54_DBD pf:HTH_26 pf:TnsD pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_7 pf:HTH_3 pf:HTH_24 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

tte:TTE0201 pf:HTH_23 pf:HTH_26 pf:Sigma54_DBD pf:HTH_Crp_2 pf:LacI pf:HTH_Tnp_ISL3 pf:HTH_7 pf:HTH_38 pf:HTH_3 pf:HTH_28 pf:Myb_DNA-binding pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

ttm:Tthe_1727 pf:MarR pf:HTH_3 pf:TnsD pf:HTH_7 pf:HTH_24 pf:LacI pf:HTH_Tnp_ISL3 pf:CENP-B_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

vpy:HZI73_17760 pf:HTH_26 pf:HTH_6 pf:HTH_3 pf:Sigma54_DBD pf:HTH_24 pf:HTH_7 pf:HTH_11 pf:MarR pf:HTH_23 pf:MarR_2 pf:LacI pf:HTH_Tnp_ISL3 pf:Trp_repressor pf:TetR_N pf:PF0610-like_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

whj:H9Q79_09725 pf:HTH_19 pf:HTH_10 pf:HTH_IclR pf:Trp_repressor pf:HTH_Tnp_ISL3 pf:HTH_23 pf:HTH_24 pf:MarR_2 pf:HTH_AraC pf:TetR_N pf:HTH_11 pf:HTH_31 pf:TnsD pf:Sigma54_DBD pf:MarR pf:LacI pf:HTH_3 pf:Sigma70_r4_2 pf:CENP-B_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3