Search common motifs in selected sequences


  
Motifs : pf:DNA_pol_ADNA polymerase family A
 pf:DUF3458_C
 pf:DUF3606Protein of unknown function (DUF3606)
 pf:DUF5677
 pf:GP3_packageDNA-packaging protein gp3
 pf:HTH_1Bacterial regulatory helix-turn-helix protein, lysR family
 pf:HTH_19Helix-turn-helix domain
 pf:HTH_26Cro/C1-type HTH DNA-binding domain
 pf:HTH_28Helix-turn-helix domain
 pf:HTH_29Winged helix-turn helix
 pf:HTH_3Helix-turn-helix
 pf:HTH_31Helix-turn-helix domain
 pf:HTH_35Winged helix-turn-helix DNA-binding
 pf:HTH_6Helix-turn-helix domain, rpiR family
 pf:HTH_7Helix-turn-helix domain of resolvase
 pf:HTH_8Bacterial regulatory protein, Fis family
 pf:HTH_Crp_2Crp-like helix-turn-helix domain
 pf:HTH_IclRIclR helix-turn-helix domain
 pf:HTH_Tnp_1Transposase
 pf:ImmE5Colicin-E5 Imm protein
 pf:LZ_Tnp_IS481leucine-zipper of insertion element IS481
 pf:LacIBacterial regulatory proteins, lacI family
 pf:MgsA_CMgsA AAA+ ATPase C terminal
 pf:MtrHTetrahydromethanopterin S-methyltransferase MtrH subunit
 pf:NUFIP1Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)
 pf:PCC
 pf:ParE_toxinParE toxin of type II toxin-antitoxin system, parDE
 pf:Phage_CI_reprBacteriophage CI repressor helix-turn-helix domain
 pf:Phage_CP76Phage regulatory protein CII (CP76)
 pf:RPTA repeated domain in UCH-protein
 pf:SIP1Survival motor neuron (SMN) interacting protein 1 (SIP1)
 pf:TetR_C_28
 pf:TetR_NBacterial regulatory proteins, tetR family
 pf:YdaS_toxin
 pf:YidB
 pf:ZnuAZinc-uptake complex component A periplasmic
 pf:dnstrm_HI1420

aaqu:D3M96_14765 pf:dnstrm_HI1420 pf:PCC pf:HTH_19 pf:HTH_3 pf:HTH_26 pf:HTH_7 pf:HTH_31

afe:Lferr_1332 pf:dnstrm_HI1420 pf:PCC pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_26

afj:AFERRID_24210 pf:dnstrm_HI1420 pf:PCC pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_26

afq:AFA_13905 pf:dnstrm_HI1420 pf:PCC pf:HTH_19 pf:HTH_3 pf:HTH_26 pf:HTH_7 pf:HTH_31

afr:AFE_1631 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_26

atw:C0099_14805 pf:dnstrm_HI1420 pf:PCC pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_31 pf:HTH_26

avd:AvCA6_40590 pf:dnstrm_HI1420 pf:PCC pf:HTH_19 pf:HTH_3 pf:HTH_31 pf:HTH_26 pf:HTH_7

avl:AvCA_40590 pf:dnstrm_HI1420 pf:PCC pf:HTH_19 pf:HTH_3 pf:HTH_31 pf:HTH_26 pf:HTH_7

avn:Avin_40590 pf:dnstrm_HI1420 pf:PCC pf:HTH_19 pf:HTH_3 pf:HTH_31 pf:HTH_26 pf:HTH_7

bac:BamMC406_3672 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

baen:L3V59_33865 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bam:Bamb_5507 pf:dnstrm_HI1420 pf:DUF3458_C pf:HTH_3 pf:HTH_26

bced:DM42_4271 pf:dnstrm_HI1420 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

bcen:DM39_4360 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bceo:I35_4713 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcep:APZ15_20355 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcew:DM40_3787 pf:dnstrm_HI1420 pf:DUF3458_C pf:RPT pf:HTH_3 pf:HTH_26

bch:Bcen2424_3780 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcj:BCAM0815 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcm:Bcenmc03_3743 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcon:NL30_21735 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bct:GEM_4985 pf:dnstrm_HI1420 pf:DUF3458_C pf:HTH_3 pf:HTH_26

bdf:WI26_17710 pf:dnstrm_HI1420 pf:DUF3458_C pf:HTH_3 pf:HTH_26

bgm:CAL15_05685 pf:dnstrm_HI1420 pf:PCC pf:HTH_19 pf:HTH_3 pf:HTH_31 pf:HTH_26 pf:HTH_7

bhz:ACR54_02005 pf:dnstrm_HI1420 pf:PCC

blat:WK25_21515 pf:dnstrm_HI1420 pf:DUF3458_C pf:RPT pf:HTH_3 pf:HTH_26

bmec:WJ16_23050 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bpsl:WS57_09955 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bpyr:ABD05_17705 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

brh:RBRH_01171 pf:dnstrm_HI1420 pf:MgsA_C

bstg:WT74_23115 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bstl:BBJ41_31755 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

btei:WS51_02395 pf:dnstrm_HI1420 pf:DUF3458_C pf:HTH_3 pf:HTH_26

bub:BW23_4538 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

cabk:NK8_22350 pf:dnstrm_HI1420 pf:RPT

cbx:Cenrod_2065 pf:dnstrm_HI1420 pf:PCC pf:HTH_3

chel:AL346_13755 pf:dnstrm_HI1420 pf:PCC pf:HTH_35 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_7

cof:FOZ74_02920 pf:dnstrm_HI1420 pf:PCC pf:HTH_3 pf:HTH_19 pf:HTH_31 pf:HTH_26 pf:HTH_7

cwa:CwatDRAFT_0690 pf:dnstrm_HI1420 pf:HTH_8 pf:Phage_CP76 pf:HTH_35 pf:HTH_3 pf:HTH_26

dcs:ISN74_00165 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_26

fpho:SHINM1_009430 pf:dnstrm_HI1420 pf:HTH_19 pf:HTH_3 pf:HTH_31 pf:HTH_26 pf:HTH_7

hash:HXW73_04655 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

hnp:SR894_13485 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

hol:HORIV_46550 pf:dnstrm_HI1420 pf:NUFIP1 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

hpro:LMS44_15235 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

htt:HZS52_12885 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

jes:JHS3_14030 pf:dnstrm_HI1420 pf:PCC pf:HTH_3 pf:HTH_19 pf:HTH_26 pf:HTH_31 pf:HTH_7

jie:OH818_28035 pf:dnstrm_HI1420 pf:ImmE5 pf:DUF3606 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

jri:P9875_06820 pf:dnstrm_HI1420 pf:RPT pf:HTH_26 pf:HTH_3 pf:HTH_19 pf:HTH_31 pf:HTH_7

kim:G3T16_06770 pf:dnstrm_HI1420 pf:GP3_package pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_19 pf:HTH_3 pf:HTH_26 pf:Phage_CI_repr pf:TetR_N pf:HTH_31 pf:HTH_7

kro:BVG79_p3000008 pf:dnstrm_HI1420 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

lih:L63ED372_00103 pf:dnstrm_HI1420 pf:PCC pf:HTH_3 pf:HTH_26

lue:DCD74_02135 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_7

maad:AZF01_23210 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_Crp_2 pf:HTH_26 pf:HTH_31

mlut:JET14_21120 pf:dnstrm_HI1420 pf:HTH_26 pf:HTH_35 pf:HTH_Crp_2 pf:HTH_3 pf:HTH_31

mmed:Mame_04993 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_Crp_2 pf:HTH_26 pf:HTH_31

nmv:NITMOv2_1048 pf:ParE_toxin pf:dnstrm_HI1420

noc:Noc_0449 pf:dnstrm_HI1420 pf:ZnuA pf:HTH_8 pf:HTH_3 pf:HTH_26

orn:DV701_01420 pf:dnstrm_HI1420 pf:DNA_pol_A pf:SIP1 pf:TetR_C_28 pf:HTH_35 pf:Phage_CP76 pf:HTH_28 pf:HTH_8 pf:HTH_3 pf:HTH_31 pf:TetR_N

paex:JHW48_18235 pf:dnstrm_HI1420 pf:PCC

palv:KSS97_03220 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_19 pf:HTH_26 pf:HTH_31

pay:PAU_01829 pf:dnstrm_HI1420

pcas:LOY40_02345 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_19 pf:HTH_26 pf:HTH_31

pfg:AB870_24475 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_31

pfo:Pfl01_0420 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_26 pf:HTH_31 pf:HTH_7

phl:KKY_686 pf:dnstrm_HI1420 pf:PCC pf:Phage_CP76 pf:HTH_35 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

pke:DLD99_02405 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_26 pf:HTH_31 pf:HTH_7

plq:AA042_12105 pf:dnstrm_HI1420 pf:HTH_31 pf:HTH_35 pf:HTH_8 pf:HTH_3 pf:HTH_19 pf:TetR_N pf:HTH_26 pf:HTH_7

plu:plu2706 pf:dnstrm_HI1420 pf:HTH_IclR pf:Phage_CP76 pf:HTH_3 pf:HTH_19 pf:HTH_7 pf:HTH_31 pf:HTH_26

plum:A4R40_13475 pf:dnstrm_HI1420 pf:HTH_IclR pf:Phage_CP76 pf:HTH_3 pf:HTH_19 pf:HTH_7 pf:HTH_31 pf:HTH_26

pmed:E3Z27_02160 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_19 pf:HTH_31 pf:HTH_26

pmeh:JWJ88_13085 pf:dnstrm_HI1420 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

pmex:H4W19_14505 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

ppsh:G5J76_01270 pf:dnstrm_HI1420

psil:PMA3_01555 pf:dnstrm_HI1420 pf:HTH_1 pf:HTH_35 pf:HTH_8 pf:TetR_N pf:HTH_3 pf:HTH_31 pf:HTH_26 pf:HTH_7 pf:HTH_19

pstw:DSJ_17530 pf:dnstrm_HI1420 pf:HTH_Tnp_1 pf:Phage_CP76 pf:YdaS_toxin pf:LZ_Tnp_IS481 pf:HTH_8 pf:HTH_3 pf:HTH_19 pf:TetR_N pf:HTH_31 pf:LacI pf:HTH_7 pf:HTH_26

ptt:VY86_13890 pf:dnstrm_HI1420 pf:DUF5677 pf:HTH_35 pf:Phage_CP76 pf:HTH_29 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31 pf:HTH_7

ptw:TUM18999_41670 pf:dnstrm_HI1420 pf:HTH_IclR pf:HTH_3 pf:HTH_19 pf:HTH_31 pf:HTH_26 pf:HTH_7

ptz:HU718_003125 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_31 pf:HTH_26 pf:HTH_7

pus:CKA81_05990 pf:dnstrm_HI1420 pf:PCC pf:HTH_19 pf:HTH_3 pf:HTH_26 pf:HTH_31 pf:HTH_7

rant:RHODO2019_18885 pf:dnstrm_HI1420 pf:YidB pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_31 pf:HTH_7

rhd:R2APBS1_2214 pf:dnstrm_HI1420 pf:HTH_3 pf:TetR_N

rin:ACS15_5529 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

rpm:RSPPHO_00073 pf:dnstrm_HI1420 pf:PCC pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

rpu:CDC45_17960 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_31

rse:F504_3548 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_31

rsg:JK151_22845 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_7

rsl:RPSI07_mp0060 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_7

rso:RSp0076 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_31

rsy:RSUY_32640 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

sbd:ATN00_21795 pf:dnstrm_HI1420 pf:YidB pf:HTH_29 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

sdf:ACG33_07305 pf:dnstrm_HI1420

sphd:HY78_29725 pf:dnstrm_HI1420 pf:YidB pf:HTH_29 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

tun:J9260_10105 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_7

xce:Xcel_3267 pf:dnstrm_HI1420 pf:HTH_Tnp_1 pf:Phage_CP76 pf:HTH_8 pf:HTH_26 pf:TetR_N pf:HTH_3 pf:Phage_CI_repr pf:HTH_7 pf:HTH_31 pf:HTH_6

xfa:XF_1702 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xff:XFLM_11700 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xfl:P303_08740 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xfn:XfasM23_1254 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xfs:D934_06750 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xft:PD_1177 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31