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Motifs : | pf:4HB_MCP_1 | Four helix bundle sensory module for signal transduction
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| pf:5_3_exonuc | 5'-3' exonuclease, C-terminal SAM fold
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| pf:5_3_exonuc_N | 5'-3' exonuclease, N-terminal resolvase-like domain
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| pf:AAA | ATPase family associated with various cellular activities (AAA)
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| pf:AAA_14 | AAA domain
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| pf:AAA_16 | AAA ATPase domain
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| pf:AAA_22 | AAA domain
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| pf:AAA_23 | AAA domain
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| pf:AAA_27 | AAA domain
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| pf:AAA_29 | P-loop containing region of AAA domain
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| pf:ACC_epsilon | Acyl-CoA carboxylase epsilon subunit
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| pf:AC_1 | |
| pf:ALF | Short repeats of unknown function
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| pf:ALTTAQ_rpt | |
| pf:ATPase_2 | ATPase domain predominantly from Archaea
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| pf:AcetylCoA_hyd_C | Acetyl-CoA hydrolase/transferase C-terminal domain
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| pf:Ad_Cy_reg | Adenylate cyclase regulatory domain
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| pf:Aminotran_3 | Aminotransferase class-III
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| pf:Aminotran_5 | Aminotransferase class-V
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| pf:Arg_decarbox_C | |
| pf:Autotransporter | Autotransporter beta-domain
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| pf:Beta_elim_lyase | Beta-eliminating lyase
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| pf:BibA_N | |
| pf:Brr6_like_C_C | Di-sulfide bridge nucleocytoplasmic transport domain
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| pf:CD4-extracel | CD4, extracellular
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| pf:CH | Calponin homology (CH) domain
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| pf:CPSF100_C | Cleavage and polyadenylation factor 2 C-terminal
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| pf:Chi-conotoxin | |
| pf:CoA_trans | Coenzyme A transferase
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| pf:Cys_Met_Meta_PP | Cys/Met metabolism PLP-dependent enzyme
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| pf:DNA_pol_A | DNA polymerase family A
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| pf:DNA_pol_A_exo1 | 3'-5' exonuclease
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| pf:DO-GTPase2 | |
| pf:DUF2460 | Conserved hypothetical protein 2217 (DUF2460)
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| pf:DUF3626 | Protein of unknown function (DUF3626)
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| pf:DUF5609 | |
| pf:DUF575 | Protein of unknown function (DUF575)
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| pf:DUF621 | Protein of unknown function (DUF621)
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| pf:DUF746 | Domain of Unknown Function (DUF746)
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| pf:DegT_DnrJ_EryC1 | DegT/DnrJ/EryC1/StrS aminotransferase family
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| pf:E1-E2_ATPase | E1-E2 ATPase
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| pf:Erf4 | Golgin subfamily A member 7/ERF4 family
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| pf:ErmC | 23S rRNA methylase leader peptide (ErmC)
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| pf:FAP | Fibronectin-attachment protein (FAP)
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| pf:FGF | Fibroblast growth factor
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| pf:FRG1 | FRG1-like domain
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| pf:Fascin | Fascin domain
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| pf:GAS2 | Growth-Arrest-Specific Protein 2 Domain
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| pf:GDC-P | Glycine cleavage system P-protein
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| pf:GatB_Yqey | GatB domain
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| pf:GerE | Bacterial regulatory proteins, luxR family
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| pf:Glyco_hydro_36C | Glycosyl hydrolase family 36 C-terminal domain
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| pf:Glycophorin_A | Glycophorin A
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| pf:HAD | haloacid dehalogenase-like hydrolase
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| pf:HAD_2 | Haloacid dehalogenase-like hydrolase
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| pf:HHH_2 | Helix-hairpin-helix motif
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| pf:HHH_5 | Helix-hairpin-helix domain
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| pf:HMA | Heavy-metal-associated domain
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| pf:HTH_1 | Bacterial regulatory helix-turn-helix protein, lysR family
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| pf:HTH_11 | HTH domain
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| pf:HTH_17 | Helix-turn-helix domain
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| pf:HTH_23 | Homeodomain-like domain
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| pf:HTH_26 | Cro/C1-type HTH DNA-binding domain
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| pf:HTH_28 | Helix-turn-helix domain
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| pf:HTH_29 | Winged helix-turn helix
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| pf:HTH_3 | Helix-turn-helix
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| pf:HTH_31 | Helix-turn-helix domain
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| pf:HTH_36 | Helix-turn-helix domain
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| pf:HTH_50 | |
| pf:HTH_59 | |
| pf:HTH_AsnC-type | AsnC-type helix-turn-helix domain
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| pf:HTH_DeoR | DeoR-like helix-turn-helix domain
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| pf:HTH_ParB | |
| pf:HTH_Tnp_1 | Transposase
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| pf:HTH_Tnp_ISL3 | Helix-turn-helix domain of transposase family ISL3
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| pf:Hydrolase | haloacid dehalogenase-like hydrolase
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| pf:Hydrolase_3 | haloacid dehalogenase-like hydrolase
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| pf:Hydrolase_6 | Haloacid dehalogenase-like hydrolase
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| pf:IF2_N | Translation initiation factor IF-2, N-terminal region
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| pf:Ion_trans_2 | Ion channel
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| pf:Kre9_KNH | |
| pf:LIM | LIM domain
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| pf:LRR_4 | Leucine Rich repeats (2 copies)
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| pf:LRR_8 | Leucine rich repeat
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| pf:LYTB | LytB protein
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| pf:LZ_Tnp_IS481 | leucine-zipper of insertion element IS481
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| pf:Lipase_GDSL | GDSL-like Lipase/Acylhydrolase
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| pf:Lipase_GDSL_2 | GDSL-like Lipase/Acylhydrolase family
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| pf:MerR | MerR family regulatory protein
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| pf:MerR_1 | MerR HTH family regulatory protein
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| pf:Molybdop_Fe4S4 | Molybdopterin oxidoreductase Fe4S4 domain
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| pf:Molybdopterin | Molybdopterin oxidoreductase
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| pf:Molydop_binding | Molydopterin dinucleotide binding domain
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| pf:MutS_I | MutS domain I
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| pf:MutS_II | MutS domain II
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| pf:MutS_III | MutS domain III
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| pf:MutS_IV | MutS family domain IV
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| pf:MutS_V | MutS domain V
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| pf:NACHT | NACHT domain
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| pf:NB-ARC | NB-ARC domain
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| pf:NYN_YacP | YacP-like NYN domain
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| pf:Nif11 | Nitrogen fixation protein of unknown function
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| pf:PA14 | PA14 domain
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| pf:PATR | Passenger-associated-transport-repeat
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| pf:PCB_OB | Penicillin-binding protein OB-like domain
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| pf:PH | PH domain
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| pf:POR_N | Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
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| pf:Peptidase_C32 | Equine arteritis virus putative proteinase
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| pf:Peptidase_M48 | Peptidase family M48
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| pf:Peptidase_M56 | BlaR1 peptidase M56
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| pf:Peripla_BP_6 | Periplasmic binding protein
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| pf:Phage_TAC_7 | Phage tail assembly chaperone proteins, E, or 41 or 14
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| pf:Phosphodiest | Type I phosphodiesterase / nucleotide pyrophosphatase
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| pf:Plug | TonB-dependent Receptor Plug Domain
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| pf:Poly_A_pol_cat | |
| pf:PsbP | PsbP
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| pf:PsbP_C | |
| pf:RXLR | RXLR phytopathogen effector protein, Avirulence activity
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| pf:RecA_C | |
| pf:Rhabdo_M1 | Rhabdovirus M1 matrix protein (M1 polymerase-associated protein)
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| pf:RhoGEF | RhoGEF domain
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| pf:RhoGEF67_u2 | Unstructured region two on RhoGEF 6 and 7
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| pf:Rhodanese | Rhodanese-like domain
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| pf:SAM_DrpA | |
| pf:SBD_N | |
| pf:SGSH_C | |
| pf:SH3_1 | SH3 domain
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| pf:SH3_2 | Variant SH3 domain
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| pf:SH3_9 | Variant SH3 domain
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| pf:Sec3-PIP2_bind | Exocyst complex component SEC3 N-terminal PIP2 binding PH
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| pf:SelA | L-seryl-tRNA selenium transferase
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| pf:Shikimate_DH | Shikimate / quinate 5-dehydrogenase
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| pf:Sigma70_ECF | ECF sigma factor
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| pf:Sigma70_r4 | Sigma-70, region 4
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| pf:Sigma70_r4_2 | Sigma-70, region 4
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| pf:Sulfatase | Sulfatase
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| pf:T2SSK | Type II secretion system (T2SS), protein K
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| pf:TIR | TIR domain
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| pf:TIR_2 | TIR domain
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| pf:TPP_enzyme_C | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
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| pf:TPP_enzyme_M | Thiamine pyrophosphate enzyme, central domain
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| pf:TPP_enzyme_N | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
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| pf:TonB_dep_Rec | TonB dependent receptor
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| pf:Transgly | Transglycosylase
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| pf:Transpeptidase | Penicillin binding protein transpeptidase domain
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| pf:UBA_3 | Fungal ubiquitin-associated domain
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| pf:UPF0270 | Uncharacterised protein family (UPF0270)
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| pf:Xre-like-HTH | |
| pf:YdaS_toxin | |
| pf:YfeC-like | |
| pf:YgjP-like | |