Search common motifs in selected sequences


  
Motifs : pf:AAAATPase family associated with various cellular activities (AAA)
 pf:AAA_13AAA domain
 pf:AAA_14AAA domain
 pf:AAA_16AAA ATPase domain
 pf:AAA_19AAA domain
 pf:AAA_22AAA domain
 pf:AAA_25AAA domain
 pf:AAA_29P-loop containing region of AAA domain
 pf:AAA_33AAA domain
 pf:AAA_5AAA domain (dynein-related subfamily)
 pf:AAA_6Hydrolytic ATP binding site of dynein motor region D1
 pf:AAA_7P-loop containing dynein motor region D3
 pf:AAA_8P-loop containing dynein motor region D4
 pf:AAA_9ATP-binding dynein motor region D5
 pf:AAA_lid_1
 pf:AAA_lid_11
 pf:AAA_lid_7
 pf:ABC_tranABC transporter
 pf:AEP1ATPase expression protein 1
 pf:AKAP_110A-kinase anchor protein 110 kDa (AKAP 110)
 pf:ANAPC3Anaphase-promoting complex, cyclosome, subunit 3
 pf:ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domain
 pf:ATG17_like
 pf:Alpha-mann_midAlpha mannosidase middle domain
 pf:ApolipoproteinApolipoprotein A1/A4/E domain
 pf:Asp_Glu_race_2Putative aspartate racemase
 pf:AstBSuccinylarginine dihydrolase
 pf:Bse634ICfr10I/Bse634I restriction endonuclease
 pf:COG4_N
 pf:COG6_N
 pf:CTD9
 pf:ChuX_HutXHaem utilisation ChuX/HutX
 pf:Cnn_1NCentrosomin N-terminal motif 1
 pf:Colicin_immunBacterial self-protective colicin-like immunity
 pf:DEADDEAD/DEAH box helicase
 pf:DHC_N1Dynein heavy chain, N-terminal region 1
 pf:DHC_N2Dynein heavy chain, N-terminal region 2
 pf:DIRPDIRP
 pf:DUF1542Domain of Unknown Function (DUF1542)
 pf:DUF1664Protein of unknown function (DUF1664)
 pf:DUF2777Protein of unknown function (DUF2777)
 pf:DUF3450Protein of unknown function (DUF3450)
 pf:DUF4407Domain of unknown function (DUF4407)
 pf:DUF4806Domain of unknown function (DUF4806)
 pf:DUF5063Domain of unknown function (DUF5063)
 pf:DUF5082Domain of unknown function (DUF5082)
 pf:DUF5344
 pf:DUF5783
 pf:DUF6038
 pf:DUF6417
 pf:DUF6507
 pf:DUF6781
 pf:DZRDouble zinc ribbon
 pf:Dockerin_1Dockerin type I repeat
 pf:Dynamin_NDynamin family
 pf:Dynein_AAA_lid
 pf:Dynein_heavyDynein heavy chain and region D6 of dynein motor
 pf:EAD6
 pf:EF-hand_1EF hand
 pf:EF-hand_5EF hand
 pf:EF-hand_6EF-hand domain
 pf:EF-hand_7EF-hand domain pair
 pf:EF-hand_8EF-hand domain pair
 pf:EntA_ImmunEnterocin A Immunity
 pf:Exonuc_VII_LExonuclease VII, large subunit
 pf:EzrASeptation ring formation regulator, EzrA
 pf:FGE-sulfataseSulfatase-modifying factor enzyme 1
 pf:FUT8_N_cat
 pf:FadAAdhesion protein FadA
 pf:FapA
 pf:Formyl_trans_CFormyl transferase, C-terminal domain
 pf:GATGAT domain
 pf:GBPGuanylate-binding protein, N-terminal domain
 pf:Gig2-like
 pf:GlucosaminidaseMannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
 pf:Glyco_hydro38C2
 pf:Glyco_hydro_15Glycosyl hydrolases family 15
 pf:Glyco_hydro_38CGlycosyl hydrolases family 38 C-terminal domain
 pf:Glyco_hydro_38N
 pf:HAMPHAMP domain
 pf:HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HATPase_c_2Histidine kinase-like ATPase domain
 pf:HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HATPase_c_5GHKL domain
 pf:Helicase_CHelicase conserved C-terminal domain
 pf:HisKAHis Kinase A (phospho-acceptor) domain
 pf:HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA
 pf:IstB_IS21IstB-like ATP binding protein
 pf:KPBB_C
 pf:KinesinKinesin motor domain
 pf:LIN9_C
 pf:Laminin_ILaminin Domain I
 pf:Laminin_IILaminin Domain II
 pf:LapA_dom
 pf:LmjF365940-deamA distinct subfamily of CDD/CDA-like deaminases
 pf:MA3MA3 domain
 pf:MIC19_MIC25
 pf:MIF4GMIF4G domain
 pf:MMR_HSR150S ribosome-binding GTPase
 pf:MMS19_CRNAPII transcription regulator C-terminal
 pf:MMS19_NDos2-interacting transcription regulator of RNA-Pol-II
 pf:MTMicrotubule-binding stalk of dynein motor
 pf:MbeD_MobDMbeD/MobD like
 pf:Mg_chelataseMagnesium chelatase, subunit ChlI
 pf:Microtub_bdMicrotubule binding
 pf:NACHTNACHT domain
 pf:NHLNHL repeat
 pf:N_BRCA1_IGIg-like domain from next to BRCA1 gene
 pf:Noelin-1Neurogenesis glycoprotein
 pf:Nucleopor_Nup85Nup85 Nucleoporin
 pf:OATPOrganic Anion Transporter Polypeptide (OATP) family
 pf:OEPOuter membrane efflux protein
 pf:OmpHOuter membrane protein (OmpH-like)
 pf:PASPAS fold
 pf:PAS_4PAS fold
 pf:PAS_8PAS domain
 pf:PAS_9PAS domain
 pf:PQQ_2PQQ-like domain
 pf:PQQ_3PQQ-like domain
 pf:PRP21_like_PPre-mRNA splicing factor PRP21 like protein
 pf:ParcGParkin co-regulated protein
 pf:Phage_Mu_GamBacteriophage Mu Gam like protein
 pf:PhoHPhoH-like protein
 pf:Plavaka
 pf:PspBPhage shock protein B
 pf:QueFQueF-like protein
 pf:Rad17Rad17 cell cycle checkpoint protein
 pf:ResIIIType III restriction enzyme, res subunit
 pf:RuvB_CHolliday junction DNA helicase ruvB C-terminus
 pf:RuvB_NHolliday junction DNA helicase ruvB N-terminus
 pf:SAGA-Tad1Transcriptional regulator of RNA polII, SAGA, subunit
 pf:SGLSMP-30/Gluconolaconase/LRE-like region
 pf:SLFN-g3_helicase
 pf:SMI1_KNR4SMI1 / KNR4 family (SUKH-1)
 pf:SNF2-rel_dom
 pf:SNF2_assocBacterial SNF2 helicase associated
 pf:SWI2_SNF2
 pf:SWIMSWIM zinc finger
 pf:SipA_VBS
 pf:SpectrinSpectrin repeat
 pf:SurpSurp module
 pf:SyntaxinSyntaxin
 pf:T2SSEType II/IV secretion system protein
 pf:TAF6_CTAF6 C-terminal HEAT repeat domain
 pf:TAFHNHR1 homology to TAF
 pf:TBCATubulin binding cofactor A
 pf:TMF_DNA_bdTATA element modulatory factor 1 DNA binding
 pf:TMPITTMPIT-like protein
 pf:TPR_1Tetratricopeptide repeat
 pf:TPR_11TPR repeat
 pf:TPR_14Tetratricopeptide repeat
 pf:TPR_17Tetratricopeptide repeat
 pf:TPR_19Tetratricopeptide repeat
 pf:TPR_2Tetratricopeptide repeat
 pf:TPR_6Tetratricopeptide repeat
 pf:TPR_7Tetratricopeptide repeat
 pf:TPR_8Tetratricopeptide repeat
 pf:Tmemb_cc2Predicted transmembrane and coiled-coil 2 protein
 pf:UvrD-helicaseUvrD/REP helicase N-terminal domain
 pf:UvrD_CUvrD-like helicase C-terminal domain
 pf:UvrD_C_2UvrD-like helicase C-terminal domain
 pf:V-SNAREVesicle transport v-SNARE protein N-terminus
 pf:Viral_helicase1Viral (Superfamily 1) RNA helicase
 pf:bZIP_1bZIP transcription factor
 pf:nSTAND3
 pf:zf-CSLCSL zinc finger
 pf:zf-HC2Putative zinc-finger
 pf:zf-P11P-11 zinc finger

abp:AGABI1DRAFT75575 pf:Plavaka

acaa:ACAN_1514 pf:LapA_dom pf:PAS_8 pf:PAS pf:PAS_9 pf:HisKA pf:HATPase_c pf:RuvB_C

acit:HPK19_00775 pf:Colicin_immun pf:TAFH pf:zf-CSL

aey:CDG81_11790 pf:Colicin_immun

amar:AMRN_1480 pf:LapA_dom pf:PAS_8 pf:PAS pf:PAS_9 pf:HisKA pf:HATPase_c

bfo:118421886 pf:GBP pf:MMR_HSR1 pf:Dynamin_N

carg:RSJ17_20765 pf:Mg_chelatase pf:ResIII pf:UvrD-helicase pf:DEAD pf:AAA_19 pf:nSTAND3 pf:SLFN-g3_helicase pf:NACHT pf:Viral_helicase1 pf:AAA_19 pf:PhoH pf:UvrD_C pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C

cau:Caur_3216 pf:Colicin_immun pf:SAGA-Tad1 pf:MMS19_N

ccrc:123692013 pf:DIRP pf:LIN9_C pf:DUF5783

cgra:CGRAC_1734 pf:Colicin_immun

chl:Chy400_3471 pf:Colicin_immun pf:SAGA-Tad1 pf:MMS19_N

clit:OQ292_09375 pf:FGE-sulfatase pf:Glucosaminidase pf:DUF2777

cvn:111118975 pf:Microtub_bd pf:Kinesin pf:Cnn_1N pf:bZIP_1 pf:bZIP_1 pf:Cnn_1N pf:Spectrin pf:bZIP_1

ddf:DEFDS_1894 pf:FapA pf:DUF3450 pf:DUF1664 pf:TMPIT pf:TMF_DNA_bd pf:V-SNARE pf:DUF5082 pf:PAS pf:PAS_4 pf:PAS_9 pf:Syntaxin pf:OEP pf:Laminin_I pf:Laminin_II pf:COG6_N pf:DUF5344 pf:DUF4407 pf:FadA pf:FapA pf:MbeD_MobD pf:Noelin-1 pf:TMF_DNA_bd pf:DUF3450

dli:dnl_29580 pf:Colicin_immun

dmm:dnm_049090 pf:Colicin_immun

dom:RRU94_22175 pf:Colicin_immun pf:DUF5063 pf:zf-CSL

dpx:DAPPUDRAFT_190561 pf:Glyco_hydro_15 pf:KPBB_C

dpz:124331999 pf:Glyco_hydro_15 pf:KPBB_C

erc:Ecym_1117 pf:Surp pf:PRP21_like_P

eruy:OSH18_03450 pf:AstB

eum:ECUMN_2034 pf:AstB

hbq:QI031_30770 pf:FUT8_N_cat pf:Exonuc_VII_L pf:EAD6

hsy:130628804 pf:MMS19_N pf:MMS19_C pf:TAF6_C pf:ParcG pf:EntA_Immun

kas:KATP_25880 pf:AstB

kcy:RIN60_13145 pf:AstB

kie:NCTC12125_01663 pf:AstB

lsin:126970635 pf:DIRP pf:LIN9_C

masw:AM586_23325 pf:zf-HC2 pf:Colicin_immun

mcix:123670534 pf:DIRP pf:LIN9_C pf:DUF5783


msei:MSEDJ_22570 pf:Colicin_immun

mshj:MSHI_30310 pf:Colicin_immun

mun:110561251 pf:AKAP_110

mup:A0256_09610 pf:Colicin_immun

mvq:MYVA_0881 pf:Colicin_immun

nap:C3L23_06270 pf:TPR_19 pf:TPR_11 pf:TPR_17 pf:ANAPC3 pf:TPR_14 pf:TPR_2 pf:TPR_1 pf:TPR_8 pf:TPR_6 pf:TPR_7 pf:TPR_14 pf:HypA pf:DZR pf:zf-P11

nbr:O3I_024755 pf:Colicin_immun

ncm:QNK12_06495 pf:Colicin_immun pf:TAFH pf:AEP1 pf:DUF6781 pf:QueF pf:SipA_VBS

nnv:QNH39_18570 pf:Colicin_immun pf:QueF

obb:114876941 pf:EF-hand_7 pf:EF-hand_1 pf:EF-hand_6 pf:EF-hand_5 pf:Dockerin_1 pf:EF-hand_1 pf:EF-hand_6 pf:EF-hand_5 pf:EF-hand_8

ogo:124034467 pf:GAT

oke:118393023 pf:GAT

oki:109877503 pf:GAT

one:115111422 pf:GAT

otw:112232781 pf:GAT pf:LmjF365940-deam pf:DUF6417

paeq:R50912_03835 pf:OATP pf:HAMP pf:Tmemb_cc2 pf:HisKA pf:DUF4806 pf:HATPase_c pf:HATPase_c_5 pf:HATPase_c_3 pf:HATPase_c_2

pbx:123712408 pf:DIRP pf:LIN9_C

pkz:C5L36_0C09330 pf:DHC_N1 pf:DHC_N2 pf:AAA_6 pf:AAA_5 pf:AAA pf:AAA_5 pf:AAA_22 pf:Dynein_AAA_lid pf:AAA_7 pf:AAA_25 pf:nSTAND3 pf:IstB_IS21 pf:AAA_22 pf:AAA_14 pf:Mg_chelatase pf:AAA_5 pf:AAA pf:AAA_lid_7 pf:AAA_lid_1 pf:AAA_8 pf:T2SSE pf:AAA_16 pf:Rad17 pf:RuvB_N pf:AAA_29 pf:AAA_22 pf:ABC_tran pf:AAA_5 pf:AAA_14 pf:AAA pf:AAA_33 pf:MT pf:AAA_9 pf:Dynein_heavy pf:AAA_lid_11

plj:VFPFJ_05339 pf:Glyco_hydro_38N pf:Alpha-mann_mid pf:Glyco_hydro_38C pf:Glyco_hydro38C2

pmx:PERMA_0244 pf:ChuX_HutX

pnap:125058094 pf:DIRP pf:LIN9_C

prap:110994028 pf:DIRP pf:LIN9_C

ptkz:JDV02_001132 pf:Glyco_hydro_38N pf:Nucleopor_Nup85 pf:Alpha-mann_mid pf:Glyco_hydro_38C pf:Glyco_hydro38C2

ptm:GSPATT00035838001 pf:N_BRCA1_IG pf:Asp_Glu_race_2


puv:PUV_10610 pf:SWIM pf:SNF2_assoc pf:ResIII pf:SNF2-rel_dom pf:SWI2_SNF2 pf:DEAD pf:Helicase_C

rphi:132732369 pf:AAA_13 pf:EzrA pf:Gig2-like pf:COG4_N pf:Apolipoprotein pf:OmpH pf:ATG17_like pf:Phage_Mu_Gam pf:DUF6507 pf:MIC19_MIC25 pf:DUF1542 pf:TBCA pf:DUF1664 pf:PspB pf:NHL pf:PQQ_2 pf:PQQ_3 pf:ANAPC4_WD40 pf:SGL pf:Formyl_trans_C

sacg:FDZ84_24125 pf:Colicin_immun

salp:111974861 pf:GAT pf:DUF6417

sarl:SAP2_01000 pf:DUF6038

sasa:106585408 pf:GAT

sdul:129894019 pf:MIF4G pf:MA3

sly:101247897 pf:MIF4G pf:MA3

snh:120050797 pf:GAT

sot:102579530 pf:MIF4G pf:MA3

spen:107013568 pf:MIF4G pf:MA3

sra:SerAS13_2940 pf:AstB

srr:SerAS9_2938 pf:AstB

srs:SerAS12_2939 pf:AstB

ssiy:JVX97_09775 pf:Colicin_immun

stru:115164741 pf:GAT

tped:TPE_2169 pf:Colicin_immun pf:SMI1_KNR4



tva:TVAG_2v0606500 pf:CTD9

vij:JNUCC6_01705 pf:Colicin_immun pf:Bse634I pf:DUF5063

vnp:KW548_14935 pf:SAGA-Tad1 pf:Colicin_immun

zce:119833580 pf:DIRP pf:LIN9_C pf:DUF5783