Search common motifs in selected sequences


  
Motifs : pf:ATP_sub_hATP synthase complex subunit h
 pf:Blt1_CGet5 carboxyl domain
 pf:CHASE2CHASE2 domain
 pf:DUF3881Domain of unknown function, E. rectale Gene description (DUF3881)
 pf:DUF3969Protein of unknown function (DUF3969)
 pf:DUF4279Domain of unknown function (DUF4279)
 pf:DUF5053Domain of unknown function (DUF5053)
 pf:DUF5532
 pf:DUF5800
 pf:DnaG_DnaB_bindDNA primase DnaG DnaB-binding
 pf:E1_4HBUbiquitin-activating enzyme E1 four-helix bundle
 pf:Elongin_ARNA polymerase II transcription factor SIII (Elongin) subunit A
 pf:GemA
 pf:GerEBacterial regulatory proteins, luxR family
 pf:GntRBacterial regulatory proteins, gntR family
 pf:HTH_16Helix-turn-helix domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_28Helix-turn-helix domain
 pf:HTH_38Helix-turn-helix domain
 pf:HTH_48
 pf:KH_2KH domain
 pf:Knl-2-like_dom
 pf:LAM_CLysine-2,3-aminomutase
 pf:NLRC4_HD2
 pf:PDC10_C
 pf:Phage-MuB_CMu B transposition protein, C terminal
 pf:Phospholip_A2_4
 pf:PriX
 pf:RNA_polDNA-dependent RNA polymerase
 pf:Rad9_Rad53_bindFungal Rad9-like Rad53-binding
 pf:SieBSuper-infection exclusion protein B
 pf:Sigma70_ECFECF sigma factor
 pf:Sigma70_r2Sigma-70 region 2
 pf:Sigma70_r4Sigma-70, region 4
 pf:Sigma70_r4_2Sigma-70, region 4
 pf:Terminase_5Putative ATPase subunit of terminase (gpP-like)

abry:NYE86_32400 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

acht:bsdcttw_13770 pf:Sigma70_r2 pf:CHASE2 pf:PDC10_C pf:DUF5053 pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4

aeb:C6I20_00785 pf:DnaG_DnaB_bind pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38 pf:HTH_23 pf:HTH_28

amq:AMETH_0444 pf:Sigma70_ECF pf:Sigma70_r2 pf:Phospholip_A2_4 pf:DUF5800 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38 pf:HTH_28

anr:Ana3638_11575 pf:Sigma70_r2 pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

aser:Asera_05600 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38 pf:Terminase_5

atl:Athai_01830 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4

bbrg:U6N30_25820 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:DUF5532 pf:Sigma70_r4_2 pf:Sigma70_r4

bsd:BLASA_4480 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_23

cai:Caci_8330 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

calk:HUE98_16005 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_23 pf:HTH_38

ckl:CKL_1611 pf:Sigma70_r2 pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

ckr:CKR_1497 pf:Sigma70_r2 pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

coh:EAV92_18100 pf:Sigma70_r2 pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_28 pf:HTH_23

cth:Cthe_1809 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38 pf:HTH_23

ctx:Clo1313_2483 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38 pf:HTH_23

ddl:Desdi_0881 pf:Sigma70_r2 pf:RNA_pol pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_28

gfe:Gferi_14465 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

gly:K3N28_10560 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_48 pf:HTH_23

gse:GT50_01065 pf:Sigma70_r2 pf:Sigma70_ECF pf:GntR pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

gte:GTCCBUS3UF5_16300 pf:Sigma70_r2 pf:Sigma70_ECF pf:GntR pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

gtk:GT3570_06720 pf:Sigma70_r2 pf:Sigma70_ECF pf:GntR pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

gtn:GTNG_1263 pf:Sigma70_r2 pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38 pf:GerE pf:HTH_28 pf:HTH_23

jcy:M6B22_13550 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4

jtl:M6D93_02445 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4

kau:B6264_13620 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

kit:CFP65_3152 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

kqi:F1D05_16620 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:NLRC4_HD2

ksk:KSE_33690 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

ksl:OG809_07655 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:NLRC4_HD2

mana:MAMMFC1_02173 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_ECF pf:Sigma70_r4

mmar:MODMU_4999 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

ncd:ACONDI_03081 pf:DUF4279 pf:Sigma70_r2 pf:Blt1_C pf:PriX pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4

nth:Nther_2062 pf:Sigma70_r2 pf:Elongin_A pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4

pft:JBW_03215 pf:DUF3881 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:E1_4HB pf:Sigma70_r4_2 pf:Sigma70_r4

puf:UFO1_3248 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4

sact:DMT42_22150 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

salb:XNR_3527 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

salj:SMD11_3706 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sals:SLNWT_2815 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sarg:HKX69_15000 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sauo:BV401_25345 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sbro:GQF42_25090 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

scad:DN051_17815 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

scin:CP977_15330 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sco:SCO3323 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sct:SCAT_3420 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

scy:SCATT_34060 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

scyg:S1361_22385 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sdd:D9753_15265 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sdrz:NEH16_17870 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

seng:OJ254_10515 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sgf:HEP81_03470 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sgob:test1122_15125 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sgu:SGLAU_19145 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sgx:H4W23_17935 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

shau:K9S39_24435 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sho:SHJGH_5363 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

shy:SHJG_5601 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sinn:ABB07_16780 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sky:D0C37_19235 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

slon:LGI35_25495 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

slv:SLIV_21180 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

smal:SMALA_4300 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

smao:CAG99_11270 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

smob:J7W19_14715 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

snig:HEK616_72540 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

snk:CP967_19315 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

snq:CP978_19245 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sov:QZH56_19460 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

spad:DVK44_12985 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

splu:LK06_013405 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

spra:CP972_20380 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

spun:BFF78_18770 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

srim:CP984_21350 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

srj:SRO_3261 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

srk:FGW37_14890 pf:LAM_C pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sroc:RGF97_18830 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

srug:F0345_11675 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

srw:TUE45_04981 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sspo:DDQ41_18215 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

staa:LDH80_22655 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sted:SPTER_35610 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:Knl-2-like_dom pf:KH_2

stho:QNH10_03290 pf:Sigma70_r2 pf:Sigma70_ECF pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sti:Sthe_2346 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:Phage-MuB_C pf:HTH_28 pf:HTH_23

stir:DDW44_17150 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

strc:AA958_20175 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4

strh:GXP74_36695 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

stri:C7M71_017505 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

stry:EQG64_14440 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

strz:OYE22_13970 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

stub:MMF93_18845 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

sve:SVEN_3185 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

svio:HWN34_17960 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

svr:CP971_18840 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

svt:SVTN_16575 pf:Sigma70_ECF pf:Sigma70_r2 pf:GemA pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

thug:KNN16_02695 pf:Sigma70_ECF pf:HTH_16 pf:Sigma70_r2 pf:SieB pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

tis:P3962_00150 pf:Sigma70_r2 pf:Sigma70_ECF pf:Rad9_Rad53_bind pf:DUF3969 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

ttm:Tthe_1485 pf:Sigma70_r2 pf:Sigma70_ECF pf:ATP_sub_h pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38

tto:Thethe_01451 pf:Sigma70_r2 pf:Sigma70_ECF pf:ATP_sub_h pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_23 pf:HTH_38

yia:LO772_19945 pf:Sigma70_ECF pf:Sigma70_r2 pf:Sigma70_r4_2 pf:Sigma70_r4 pf:HTH_38