Search common motifs in selected sequences


  
Motifs : pf:AAAATPase family associated with various cellular activities (AAA)
 pf:AAA_16AAA ATPase domain
 pf:AAA_22AAA domain
 pf:AAA_30AAA domain
 pf:ABC1ABC1 family
 pf:ATPase_2ATPase domain predominantly from Archaea
 pf:Autoind_bindAutoinducer binding domain
 pf:B277
 pf:BrxC_BrxD
 pf:CHASE3CHASE3 domain
 pf:CollagenCollagen triple helix repeat (20 copies)
 pf:DICTSensory domain in DIguanylate Cyclases and Two-component system
 pf:DUF2378Protein of unknown function (DUF2378)
 pf:DUF3248Protein of unknown function (DUF3248)
 pf:DUF3369Domain of unknown function (DUF3369)
 pf:DUF4781Domain of unknown function (DUF4781)
 pf:DUF484Protein of unknown function, DUF484
 pf:DUF5372
 pf:DUF6444
 pf:EALEAL domain
 pf:Fes1Nucleotide exchange factor Fes1
 pf:GAFGAF domain
 pf:GAF_2GAF domain
 pf:GAF_3GAF domain
 pf:GBR2_CC
 pf:GCH_IIIGTP cyclohydrolase III
 pf:GGDEFDiguanylate cyclase, GGDEF domain
 pf:GGDEF_2
 pf:GPW_gp25Gene 25-like lysozyme
 pf:Guanylate_cycAdenylate and Guanylate cyclase catalytic domain
 pf:HAMPHAMP domain
 pf:HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:Hexokinase_2Hexokinase
 pf:HisKA_3Histidine kinase
 pf:Kinase-likeKinase-like
 pf:Lipocalin_8Lipocalin-like domain
 pf:MLTR_LBD
 pf:Med9RNA polymerase II transcription mediator complex subunit 9
 pf:NACHTNACHT domain
 pf:PASPAS fold
 pf:PAS_10PAS domain
 pf:PAS_11PAS domain
 pf:PAS_2PAS fold
 pf:PAS_3PAS fold
 pf:PAS_4PAS fold
 pf:PAS_7PAS fold
 pf:PAS_8PAS domain
 pf:PAS_9PAS domain
 pf:PHYPhytochrome region
 pf:PK_Tyr_Ser-Thr
 pf:Peptidase_M64IgA Peptidase M64
 pf:PilJType IV pili methyl-accepting chemotaxis transducer N-term
 pf:PkinaseProtein kinase domain
 pf:Pox_A_type_incViral A-type inclusion protein repeat
 pf:RHH_1Ribbon-helix-helix protein, copG family
 pf:Response_regResponse regulator receiver domain
 pf:Rib_5-P_isom_ARibose 5-phosphate isomerase A (phosphoriboisomerase A)
 pf:SUKH-4SUKH-4 immunity protein
 pf:Sfi1Sfi1 spindle body protein
 pf:TIP49TIP49 C-terminus
 pf:TMEM43Transmembrane protein 43
 pf:TPR_10Tetratricopeptide repeat
 pf:TPR_12Tetratricopeptide repeat
 pf:TPR_14Tetratricopeptide repeat
 pf:TPR_2Tetratricopeptide repeat
 pf:TPR_7Tetratricopeptide repeat
 pf:TPR_8Tetratricopeptide repeat
 pf:TerBTellurite resistance protein TerB
 pf:Trans_reg_CTranscriptional regulatory protein, C terminal
 pf:TrwB_AAD_bindType IV secretion-system coupling protein DNA-binding domain
 pf:Zeta_toxinZeta toxin
 pf:dCache_1Cache domain
 pf:dCache_3Double sensory domain of two-component sensor kinase
 pf:nSTAND3

abry:NYE86_32760 pf:GAF_3 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

abs:AZOBR_40181 pf:PAS pf:PAS_4 pf:PAS_9 pf:Sfi1 pf:GAF pf:GAF_3 pf:GGDEF

actl:L3i22_056590 pf:TerB pf:GAF_3 pf:GGDEF

afo:Afer_1191 pf:GAF pf:GAF_3 pf:GAF_2 pf:Peptidase_M64 pf:GGDEF pf:GCH_III

agla:OIE69_18830 pf:GAF_3 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

agv:OJF2_56300 pf:PAS_2 pf:PAS_4 pf:GAF pf:PHY pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:GGDEF_2 pf:EAL

ahu:A6A40_01490 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GGDEF

ams:AMIS_31150 pf:TerB pf:GGDEF pf:EAL

aory:AMOR_54030 pf:RHH_1 pf:Response_reg pf:GGDEF pf:GGDEF_2

aqz:KSP35_21690 pf:GAF pf:GAF_2 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:GGDEF

avd:AvCA6_39460 pf:GGDEF pf:DUF3248

avl:AvCA_39460 pf:GGDEF pf:DUF3248

avn:Avin_39460 pf:GGDEF pf:DUF3248

azt:TSH58p_13120 pf:PAS_4 pf:PAS_9 pf:Sfi1 pf:GAF pf:GAF_3 pf:GGDEF

bala:DSM104299_01924 pf:GGDEF pf:GAF pf:GAF_3 pf:GGDEF pf:DUF4781

bbrg:U6N30_13120 pf:DICT pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GGDEF pf:GGDEF_2

bsd:BLASA_2436 pf:EAL pf:DICT pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GGDEF

bsol:FSW04_17020 pf:GAF pf:GGDEF

cati:CS0771_44410 pf:GAF_2 pf:GAF pf:GAF_3 pf:Autoind_bind pf:GGDEF

cja:CJA_0314 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:EAL

cros:N8J89_35655 pf:Hexokinase_2 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF

cry:B7495_12360 pf:TPR_12 pf:TPR_10 pf:GGDEF

daur:Daura_44490 pf:GAF_2 pf:GAF pf:GAF_3 pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GGDEF pf:GGDEF_2

dfu:Dfulv_29720 pf:GGDEF pf:EAL

dga:DEGR_32630 pf:GAF_2 pf:GAF pf:GGDEF

dmat:Dmats_40605 pf:GAF_2 pf:GAF pf:GAF_3 pf:DUF3369 pf:PAS_8 pf:PAS_9 pf:PAS pf:PAS_4 pf:PAS_3 pf:GGDEF

dros:Drose_22495 pf:GGDEF pf:EAL

dtx:ATSB10_13870 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_7 pf:PAS_9 pf:PAS_10 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF

dvc:Dvina_46260 pf:GAF_2 pf:GAF pf:GAF_3 pf:DUF3369 pf:PAS_8 pf:PAS_9 pf:PAS pf:PAS_4 pf:PAS_3 pf:GGDEF

elio:KO353_14145 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF_3 pf:GGDEF

erz:ER308_00575 pf:GAF pf:GAF_2 pf:GGDEF pf:Collagen

gob:Gobs_4847 pf:DUF2378 pf:GAF pf:GAF_3 pf:GGDEF

iam:HC251_20830 pf:Pkinase pf:PK_Tyr_Ser-Thr pf:AAA_16 pf:BrxC_BrxD pf:nSTAND3 pf:TIP49 pf:AAA_22 pf:NACHT pf:Zeta_toxin pf:AAA pf:GAF pf:GGDEF

kbu:Q4V64_23505 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

kfl:Kfla_0305 pf:GAF_2 pf:GAF_3 pf:GAF pf:DUF3369 pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GGDEF

kqi:F1D05_22155 pf:GAF_2 pf:GAF_3 pf:GAF pf:DUF3369 pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GGDEF

kra:Krad_3602 pf:GAF_2 pf:GAF pf:GAF_3 pf:Rib_5-P_isom_A pf:GGDEF

ksl:OG809_13440 pf:B277 pf:GAF_2 pf:GAF pf:GAF_3 pf:DUF3369 pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GGDEF pf:GGDEF_2

laux:LA521A_25250 pf:CHASE3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF

llz:LYB30171_02576 pf:GGDEF pf:GGDEF_2 pf:GCH_III

mall:PBN92_05770 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_11 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF

masw:AM586_04680 pf:dCache_1 pf:dCache_3 pf:TMEM43 pf:HAMP pf:GGDEF

mfy:HH212_04635 pf:dCache_1 pf:GGDEF

mgeo:CFI10_13460 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_7 pf:PAS_9 pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF

mlv:CVS47_00350 pf:PAS_2 pf:GAF pf:PHY pf:GGDEF pf:GCH_III

mmar:MODMU_3222 pf:EAL pf:DICT pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GGDEF

msec:LN244_10850 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_7 pf:PAS_9 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:Guanylate_cyc

mshe:MAALD49_12240 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_11 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF

naka:H7F38_17040 pf:GAF_3 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

ncb:C0V82_15770 pf:HAMP pf:GGDEF pf:EAL pf:SUKH-4

nmv:NITMOv2_2146 pf:Response_reg pf:GAF pf:GAF_2 pf:GAF_3 pf:GGDEF pf:GGDEF_2 pf:GPW_gp25

parn:NBH00_19715 pf:HisKA_3 pf:HATPase_c pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3

ppel:H6H00_04455 pf:GAF_2 pf:GAF pf:GAF_3 pf:GAF pf:GAF_2 pf:GGDEF pf:GGDEF_2

psed:DM292_05055 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:TrwB_AAD_bind

psh:Psest_1569 pf:PAS_8 pf:PAS pf:PAS_7 pf:PAS_4 pf:PAS_9 pf:MLTR_LBD pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:DUF3369 pf:GGDEF pf:TrwB_AAD_bind pf:GGDEF_2

rant:RHODO2019_16095 pf:GAF pf:GAF_2 pf:GAF_3 pf:GGDEF

rhd:R2APBS1_2472 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_7 pf:PAS_9 pf:PAS_3 pf:DUF5372 pf:Fes1 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF

rrs:RoseRS_1949 pf:GBR2_CC pf:DUF6444 pf:Pox_A_type_inc pf:GAF_2 pf:GAF pf:GAF_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:Trans_reg_C pf:GAF_2 pf:GAF pf:GAF_3 pf:DUF3369 pf:GGDEF pf:GGDEF_2

saln:SALB1_3025 pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:GGDEF_2

salw:CP975_15905 pf:dCache_1 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

samb:SAM23877_3425 pf:DUF484 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF pf:GGDEF

sant:QR300_24135 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

sast:CD934_13385 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

sbat:G4Z16_19090 pf:GAF_3 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

sbro:GQF42_20990 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

scoa:QU709_23270 pf:DUF484 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

scoe:CP976_20070 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

sct:SCAT_2461 pf:GAF_2 pf:GAF_3 pf:GAF pf:Lipocalin_8 pf:PAS_8 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

scy:SCATT_24450 pf:GAF_2 pf:GAF_3 pf:GAF pf:Lipocalin_8 pf:PAS_8 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

scyn:N8I84_18915 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

sdd:D9753_19555 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

sfeu:IM697_03440 pf:GAF pf:Lipocalin_8 pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

sfug:CNQ36_15645 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF pf:GGDEF pf:GGDEF_2

sge:DWG14_04655 pf:GAF_3 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

shar:HUT13_16320 pf:GAF_3 pf:GAF pf:Lipocalin_8 pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

shaw:CEB94_18550 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF pf:GGDEF

shk:J2N69_16685 pf:dCache_1 pf:GAF_3 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

ska:CP970_23860 pf:dCache_1 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF pf:GGDEF

slk:SLUN_17985 pf:GAF_3 pf:GAF pf:Lipocalin_8 pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

sls:SLINC_3871 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

smao:CAG99_15515 pf:GAF_3 pf:GAF pf:PAS_8 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

snz:DC008_15505 pf:GAF pf:Lipocalin_8 pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

spac:B1H29_20595 pf:DUF484 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF pf:GGDEF

speu:CGZ69_16260 pf:GAF pf:GAF_3 pf:Lipocalin_8 pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

spun:BFF78_23340 pf:DUF484 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

src:M271_27795 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

ssia:A7J05_19605 pf:dCache_1 pf:GAF_3 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

stee:F3L20_30070 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS pf:PAS_9 pf:PAS_3 pf:GGDEF pf:GGDEF

sti:Sthe_3170 pf:Pkinase pf:PK_Tyr_Ser-Thr pf:ABC1 pf:Kinase-like pf:AAA_16 pf:BrxC_BrxD pf:ATPase_2 pf:AAA_30 pf:AAA_22 pf:NACHT pf:TPR_12 pf:TPR_12 pf:TPR_14 pf:TPR_7 pf:TPR_2 pf:TPR_12 pf:TPR_8 pf:GAF_2 pf:GAF pf:GAF_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF

strd:NI25_21730 pf:DUF484 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF pf:GGDEF

strf:ASR50_18465 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

strh:GXP74_03735 pf:GAF pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_3 pf:GGDEF pf:GGDEF_2

stsi:A4E84_18105 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

stui:GCM10017668_31290 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

svl:Strvi_8767 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

sxi:SXIM_31580 pf:GAF_3 pf:GAF pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GGDEF

tlu:R1T41_17005 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF_3 pf:GGDEF

tmj:P0M04_04830 pf:dCache_1 pf:GGDEF

tmo:TMO_1216 pf:dCache_1 pf:Med9 pf:HAMP pf:GAF_3 pf:GAF pf:GAF_2 pf:GGDEF pf:GGDEF_2

vab:WPS_19500 pf:PilJ pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:MLTR_LBD pf:PAS_3 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_7 pf:PAS_3 pf:GAF_3 pf:GAF_2 pf:GAF pf:GGDEF

yia:LO772_15455 pf:GAF pf:GAF_3 pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GGDEF