Search common motifs in selected sequences
Motifs :
pf:Arg_repressor
Arginine repressor, DNA binding domain
pf:BrkDBD
Brinker DNA-binding domain
pf:CENP-B_N
CENP-B N-terminal DNA-binding domain
pf:CLIP1_ZNF
CLIP1 zinc knuckle
pf:DDE_1
DDE superfamily endonuclease
pf:DDE_3
DDE superfamily endonuclease
pf:DDE_Tnp_ISAZ013
Rhodopirellula transposase DDE domain
pf:DUF1153
Protein of unknown function (DUF1153)
pf:DUF1804
Protein of unknown function (DUF1804)
pf:DUF658
Protein of unknown function (DUF658)
pf:DUF6873
pf:Esterase_PHB
pf:FeoC
FeoC like transcriptional regulator
pf:GNAT_acetyltran
GNAT acetyltransferase
pf:GerE
Bacterial regulatory proteins, luxR family
pf:HTH_17
Helix-turn-helix domain
pf:HTH_20
Helix-turn-helix domain
pf:HTH_22
HTH domain
pf:HTH_23
Homeodomain-like domain
pf:HTH_26
Cro/C1-type HTH DNA-binding domain
pf:HTH_28
Helix-turn-helix domain
pf:HTH_29
Winged helix-turn helix
pf:HTH_30
PucR C-terminal helix-turn-helix domain
pf:HTH_32
Homeodomain-like domain
pf:HTH_33
Winged helix-turn helix
pf:HTH_36
Helix-turn-helix domain
pf:HTH_38
Helix-turn-helix domain
pf:HTH_40
Helix-turn-helix domain
pf:HTH_5
Bacterial regulatory protein, arsR family
pf:HTH_59
pf:HTH_6
Helix-turn-helix domain, rpiR family
pf:HTH_7
Helix-turn-helix domain of resolvase
pf:HTH_8
Bacterial regulatory protein, Fis family
pf:HTH_IclR
IclR helix-turn-helix domain
pf:HTH_PafC
pf:HTH_Tnp_1
Transposase
pf:HTH_Tnp_1_2
Helix-turn-helix of insertion element transposase
pf:HTH_Tnp_IS630
Transposase
pf:HTH_Tnp_ISL3
Helix-turn-helix domain of transposase family ISL3
pf:HTH_Tnp_Tc3_1
Tc3 transposase
pf:HTH_Tnp_Tc3_2
Transposase
pf:HTH_WhiA
WhiA C-terminal HTH domain
pf:HTH_psq
helix-turn-helix, Psq domain
pf:HisK_N
Histidine kinase N terminal
pf:Homez
Homeodomain leucine-zipper encoding, Homez
pf:I-TevI_DNA-bd
pf:KwaB
pf:LIAS_N
N-terminal domain of lipoyl synthase of Radical_SAM family
pf:MarR
MarR family
pf:MarR_2
MarR family
pf:MdcE
Malonate decarboxylase gamma subunit (MdcE)
pf:MerR
MerR family regulatory protein
pf:PAX
'Paired box' domain
pf:RALGAPB_N
pf:RT_RNaseH_2
pf:Rota_NS53
Rotavirus RNA-binding Protein 53 (NS53)
pf:SgrR_N
Sugar transport-related sRNA regulator N-term
pf:Sigma70_r4_2
Sigma-70, region 4
pf:SpoIIID
Stage III sporulation protein D
pf:Trp_repressor
Trp repressor protein
pf:UPF0122
Putative helix-turn-helix protein, YlxM / p13 like
pf:YfeC-like
pf:rve
Integrase core domain