| | |
| Motifs : | pf:3HCDH | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
|
| | pf:3HCDH_N | 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
|
| | pf:6PF2K | 6-phosphofructo-2-kinase
|
| | pf:AAA | ATPase family associated with various cellular activities (AAA)
|
| | pf:AAA_11 | AAA domain
|
| | pf:AAA_14 | AAA domain
|
| | pf:AAA_16 | AAA ATPase domain
|
| | pf:AAA_17 | AAA domain
|
| | pf:AAA_18 | AAA domain
|
| | pf:AAA_19 | AAA domain
|
| | pf:AAA_2 | AAA domain (Cdc48 subfamily)
|
| | pf:AAA_22 | AAA domain
|
| | pf:AAA_23 | AAA domain
|
| | pf:AAA_24 | AAA domain
|
| | pf:AAA_28 | AAA domain
|
| | pf:AAA_29 | P-loop containing region of AAA domain
|
| | pf:AAA_30 | AAA domain
|
| | pf:AAA_31 | AAA domain
|
| | pf:AAA_33 | AAA domain
|
| | pf:AAA_5 | AAA domain (dynein-related subfamily)
|
| | pf:AAA_7 | P-loop containing dynein motor region D3
|
| | pf:ABC1 | ABC1 family
|
| | pf:ABC_tran | ABC transporter
|
| | pf:ACP_syn_III | |
| | pf:ADH_N | Alcohol dehydrogenase GroES-like domain
|
| | pf:ADH_zinc_N | Zinc-binding dehydrogenase
|
| | pf:ADH_zinc_N_2 | Zinc-binding dehydrogenase
|
| | pf:ADIP | Afadin- and alpha -actinin-Binding
|
| | pf:AI-2E_transport | AI-2E family transporter
|
| | pf:ANIS5_cation-bd | |
| | pf:APH | Phosphotransferase enzyme family
|
| | pf:APS_kinase | Adenylylsulphate kinase
|
| | pf:ATG14 | |
| | pf:ATP13 | Mitochondrial ATPase expression
|
| | pf:ATP_bind_1 | Conserved hypothetical ATP binding protein
|
| | pf:ATPase_2 | ATPase domain predominantly from Archaea
|
| | pf:AbiEi_4 | Transcriptional regulator, AbiEi antitoxin
|
| | pf:Acyl_transf_1 | Acyl transferase domain
|
| | pf:AlaDh_PNT_C | Alanine dehydrogenase/PNT, C-terminal domain
|
| | pf:Ank | Ankyrin repeat
|
| | pf:Ank_2 | Ankyrin repeats (3 copies)
|
| | pf:Ank_3 | Ankyrin repeat
|
| | pf:Ank_4 | Ankyrin repeats (many copies)
|
| | pf:Ank_5 | Ankyrin repeats (many copies)
|
| | pf:ApbA | Ketopantoate reductase PanE/ApbA
|
| | pf:Arf | ADP-ribosylation factor family
|
| | pf:ArsA_ATPase | Anion-transporting ATPase
|
| | pf:BAH | BAH domain
|
| | pf:Baculo_PEP_C | Baculovirus polyhedron envelope protein, PEP, C terminus
|
| | pf:Bap31_Bap29_C | |
| | pf:CBP4 | CBP4
|
| | pf:CCDC22_CC | |
| | pf:CCG | Cysteine-rich domain
|
| | pf:CENP-F_leu_zip | Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
|
| | pf:CHASE3 | CHASE3 domain
|
| | pf:CarbopepD_reg_2 | CarboxypepD_reg-like domain
|
| | pf:CarboxypepD_reg | Carboxypeptidase regulatory-like domain
|
| | pf:Cas_Cas4 | Domain of unknown function DUF83
|
| | pf:CbbQ_C | CbbQ/NirQ/NorQ C-terminal
|
| | pf:CbiA | CobQ/CobB/MinD/ParA nucleotide binding domain
|
| | pf:CoaE | Dephospho-CoA kinase
|
| | pf:Cytidylate_kin | Cytidylate kinase
|
| | pf:Cytidylate_kin2 | Cytidylate kinase-like family
|
| | pf:DAO | FAD dependent oxidoreductase
|
| | pf:DEAD | DEAD/DEAH box helicase
|
| | pf:DUF11 | Domain of unknown function DUF11
|
| | pf:DUF1664 | Protein of unknown function (DUF1664)
|
| | pf:DUF2024 | Domain of unknown function (DUF2024)
|
| | pf:DUF234 | Archaea bacterial proteins of unknown function
|
| | pf:DUF262 | Protein of unknown function DUF262
|
| | pf:DUF2800 | Protein of unknown function (DUF2800)
|
| | pf:DUF3069 | Protein of unknown function (DUF3069)
|
| | pf:DUF3164 | Protein of unknown function (DUF3164)
|
| | pf:DUF4357 | Domain of unknown function (DUF4357)
|
| | pf:DUF6081 | |
| | pf:DUF6279 | |
| | pf:DUF6284 | |
| | pf:DUF881 | Bacterial protein of unknown function (DUF881)
|
| | pf:Diphthamide_syn | Putative diphthamide synthesis protein
|
| | pf:Dna2 | DNA replication factor Dna2
|
| | pf:Docking | Erythronolide synthase docking
|
| | pf:E1-E2_ATPase | E1-E2 ATPase
|
| | pf:ECH_1 | Enoyl-CoA hydratase/isomerase
|
| | pf:ECH_2 | Enoyl-CoA hydratase/isomerase
|
| | pf:EFP | Elongation factor P (EF-P) OB domain
|
| | pf:EFP_N | Elongation factor P (EF-P) KOW-like domain
|
| | pf:EGF | EGF-like domain
|
| | pf:EGF_3 | EGF domain
|
| | pf:EGF_CA | Calcium-binding EGF domain
|
| | pf:ELM2 | ELM2 domain
|
| | pf:Elong-fact-P_C | Elongation factor P, C-terminal
|
| | pf:EndIII_4Fe-2S | Iron-sulfur binding domain of endonuclease III
|
| | pf:Epimerase | NAD dependent epimerase/dehydratase family
|
| | pf:Exo5 | Exonuclease V - a 5' deoxyribonuclease
|
| | pf:Exonuc_VII_L | Exonuclease VII, large subunit
|
| | pf:FCH | Fes/CIP4, and EFC/F-BAR homology domain
|
| | pf:FYVE_2 | FYVE-type zinc finger
|
| | pf:FeoB_N | Ferrous iron transport protein B
|
| | pf:Fer2_BFD | |
| | pf:FlaC_arch | Flagella accessory protein C (FlaC)
|
| | pf:Fructosamin_kin | Fructosamine kinase
|
| | pf:G-alpha | G-protein alpha subunit
|
| | pf:GDP_Man_Dehyd | GDP-mannose 4,6 dehydratase
|
| | pf:GIY-YIG | GIY-YIG catalytic domain
|
| | pf:GTP_EFTU | Elongation factor Tu GTP binding domain
|
| | pf:GTP_EFTU_D2 | Elongation factor Tu domain 2
|
| | pf:GUB_WAK_bind | Wall-associated receptor kinase galacturonan-binding
|
| | pf:GerE | Bacterial regulatory proteins, luxR family
|
| | pf:Glu_dehyd_C | Glucose dehydrogenase C-terminus
|
| | pf:Glyco_hydro_16 | Glycosyl hydrolases family 16
|
| | pf:Glyco_hydro_38C | Glycosyl hydrolases family 38 C-terminal domain
|
| | pf:Guanylate_kin | Guanylate kinase
|
| | pf:HAD | haloacid dehalogenase-like hydrolase
|
| | pf:HHH | Helix-hairpin-helix motif
|
| | pf:HHH_2 | Helix-hairpin-helix motif
|
| | pf:HHH_3 | Helix-hairpin-helix motif
|
| | pf:HHH_5 | Helix-hairpin-helix domain
|
| | pf:HMA | Heavy-metal-associated domain
|
| | pf:HTH_11 | HTH domain
|
| | pf:HTH_17 | Helix-turn-helix domain
|
| | pf:HTH_22 | HTH domain
|
| | pf:HTH_23 | Homeodomain-like domain
|
| | pf:HTH_27 | Winged helix DNA-binding domain
|
| | pf:HTH_29 | Winged helix-turn helix
|
| | pf:HTH_5 | Bacterial regulatory protein, arsR family
|
| | pf:HTH_6 | Helix-turn-helix domain, rpiR family
|
| | pf:HTH_7 | Helix-turn-helix domain of resolvase
|
| | pf:HTH_DeoR | DeoR-like helix-turn-helix domain
|
| | pf:HTH_Mga | M protein trans-acting positive regulator (MGA) HTH domain
|
| | pf:HTH_PafC | |
| | pf:HTH_Tnp_1_2 | Helix-turn-helix of insertion element transposase
|
| | pf:HTH_Tnp_ISL3 | Helix-turn-helix domain of transposase family ISL3
|
| | pf:HhH-GPD | HhH-GPD superfamily base excision DNA repair protein
|
| | pf:Hydrolase | haloacid dehalogenase-like hydrolase
|
| | pf:Hydrolase_3 | haloacid dehalogenase-like hydrolase
|
| | pf:IF-2 | Translation-initiation factor 2
|
| | pf:IF2_N | Translation initiation factor IF-2, N-terminal region
|
| | pf:IF2_assoc | Bacterial translation initiation factor IF-2 associated region
|
| | pf:IRK_C | |
| | pf:Ig_3 | Immunoglobulin domain
|
| | pf:Intein_splicing | Intein splicing domain
|
| | pf:KAsynt_C_assoc | Ketoacyl-synthetase C-terminal extension
|
| | pf:KR | KR domain
|
| | pf:KTI12 | Chromatin associated protein KTI12
|
| | pf:Ketoacyl-synt_C | Beta-ketoacyl synthase, C-terminal domain
|
| | pf:Kinase-like | Kinase-like
|
| | pf:Ku_N | Ku70/Ku80 N-terminal alpha/beta domain
|
| | pf:LPP | Lipoprotein leucine-zipper
|
| | pf:LRR_8 | Leucine rich repeat
|
| | pf:La_HTH_kDCL | |
| | pf:Lactamase_B | Metallo-beta-lactamase superfamily
|
| | pf:Lactamase_B_2 | Beta-lactamase superfamily domain
|
| | pf:Lactamase_B_3 | Beta-lactamase superfamily domain
|
| | pf:Lactamase_B_6 | Metallo-beta-lactamase superfamily domain
|
| | pf:Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily
|
| | pf:Lyase_aromatic | Aromatic amino acid lyase
|
| | pf:M20_dimer | Peptidase dimerisation domain
|
| | pf:MFS_1 | Major Facilitator Superfamily
|
| | pf:MFS_2 | MFS/sugar transport protein
|
| | pf:MFS_3 | Transmembrane secretion effector
|
| | pf:MMR_HSR1 | 50S ribosome-binding GTPase
|
| | pf:MMR_HSR1_Xtn | C-terminal region of MMR_HSR1 domain
|
| | pf:MRP-S27 | Mitochondrial 28S ribosomal protein S27
|
| | pf:MarR_2 | MarR family
|
| | pf:MbeD_MobD | MbeD/MobD like
|
| | pf:MeaB | |
| | pf:MecA | Negative regulator of genetic competence (MecA)
|
| | pf:Med11 | Mediator complex protein
|
| | pf:Med16_bridge | |
| | pf:Metalloenzyme | Metalloenzyme superfamily
|
| | pf:Mg_chelatase | Magnesium chelatase, subunit ChlI
|
| | pf:Mga | Mga helix-turn-helix domain
|
| | pf:MotB_plug | Membrane MotB of proton-channel complex MotA/MotB
|
| | pf:Msg2_C | Major surface glycoprotein 2 C terminal
|
| | pf:MutS_III | MutS domain III
|
| | pf:Myco_19_kDa | Mycobacterium 19 kDa lipoprotein antigen
|
| | pf:NACHT | NACHT domain
|
| | pf:NAD_Gly3P_dh_N | NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
|
| | pf:NAD_binding_2 | NAD binding domain of 6-phosphogluconate dehydrogenase
|
| | pf:NAD_binding_8 | NAD(P)-binding Rossmann-like domain
|
| | pf:NB-ARC | NB-ARC domain
|
| | pf:NB-LRR | Late blight resistance protein R1
|
| | pf:NUDIX_4 | NUDIX domain
|
| | pf:Nitroreductase | Nitroreductase family
|
| | pf:NmrA | NmrA-like family
|
| | pf:OATP | Organic Anion Transporter Polypeptide (OATP) family
|
| | pf:OmpA | OmpA family
|
| | pf:PA14 | PA14 domain
|
| | pf:PD40 | WD40-like Beta Propeller Repeat
|
| | pf:PDDEXK_1 | PD-(D/E)XK nuclease superfamily
|
| | pf:PDDEXK_3 | PD-(D/E)XK nuclease superfamily
|
| | pf:PIP49_C | Protein-kinase domain of FAM69
|
| | pf:PKS_DH_N | |
| | pf:PK_Tyr_Ser-Thr | |
| | pf:PP-binding | Phosphopantetheine attachment site
|
| | pf:PPR | PPR repeat
|
| | pf:PPR_1 | PPR repeat
|
| | pf:PPR_2 | PPR repeat family
|
| | pf:PPR_3 | Pentatricopeptide repeat domain
|
| | pf:PPR_long | Pentacotripeptide-repeat region of PROPR
|
| | pf:PRD | PRD domain
|
| | pf:PRK | Phosphoribulokinase / Uridine kinase family
|
| | pf:PS-DH | Polyketide synthase dehydratase
|
| | pf:PTPS | 6-pyruvoyl tetrahydropterin synthase
|
| | pf:PTS_EIIA_1 | phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
|
| | pf:PTS_EIIB | phosphotransferase system, EIIB
|
| | pf:PTS_EIIC | Phosphotransferase system, EIIC
|
| | pf:PTS_IIB | PTS system, Lactose/Cellobiose specific IIB subunit
|
| | pf:Par3_HAL_N_term | |
| | pf:ParA | NUBPL iron-transfer P-loop NTPase
|
| | pf:PduV-EutP | Ethanolamine utilisation - propanediol utilisation
|
| | pf:Peptidase_M20 | Peptidase family M20/M25/M40
|
| | pf:Peptidase_M28 | Peptidase family M28
|
| | pf:PglZ | PglZ domain
|
| | pf:Phage_Capsid_P3 | P3 major capsid protein
|
| | pf:PilO | Pilus assembly protein, PilO
|
| | pf:Pkinase | Protein kinase domain
|
| | pf:Pkinase_fungal | |
| | pf:Polysacc_synt_2 | Polysaccharide biosynthesis protein
|
| | pf:Prismane | Prismane/CO dehydrogenase family
|
| | pf:Pro_dh | Proline dehydrogenase
|
| | pf:Prominin | Prominin
|
| | pf:PsiA | PsiA protein
|
| | pf:PspA_IM30 | PspA/IM30 family
|
| | pf:PuR_N | Bacterial purine repressor, N-terminal
|
| | pf:Pyr_redox | Pyridine nucleotide-disulphide oxidoreductase
|
| | pf:Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase
|
| | pf:RAMA | |
| | pf:RNA_binding | RNA binding
|
| | pf:RNA_helicase | RNA helicase
|
| | pf:Rad17 | Rad17 cell cycle checkpoint protein
|
| | pf:Ras | Ras family
|
| | pf:RecJ_OB | |
| | pf:ResIII | Type III restriction enzyme, res subunit
|
| | pf:RhoGAP | RhoGAP domain
|
| | pf:Ribonuc_2-5A | Ribonuclease 2-5A
|
| | pf:RmlD_sub_bind | RmlD substrate binding domain
|
| | pf:Roc | Ras of Complex, Roc, domain of DAPkinase
|
| | pf:RsgA_GTPase | |
| | pf:RuvB_N | Holliday junction DNA helicase ruvB N-terminus
|
| | pf:Rx_N | |
| | pf:SAM_1 | SAM domain (Sterile alpha motif)
|
| | pf:SAM_2 | SAM domain (Sterile alpha motif)
|
| | pf:SH3_1 | SH3 domain
|
| | pf:SH3_2 | Variant SH3 domain
|
| | pf:SH3_9 | Variant SH3 domain
|
| | pf:SKA2 | Spindle and kinetochore-associated protein 2
|
| | pf:SKN1_KRE6_Sbg1 | |
| | pf:SMC_N | RecF/RecN/SMC N terminal domain
|
| | pf:SRP54 | SRP54-type protein, GTPase domain
|
| | pf:SRP54_N | SRP54-type protein, helical bundle domain
|
| | pf:SRPRB | Signal recognition particle receptor beta subunit
|
| | pf:SRP_SPB | Signal peptide binding domain
|
| | pf:SWIRM-assoc_2 | SWIRM-associated domain at the N-terminal
|
| | pf:Sec10_N | |
| | pf:Sigma70_ECF | ECF sigma factor
|
| | pf:Sigma70_r4_2 | Sigma-70, region 4
|
| | pf:SpoIIID | Stage III sporulation protein D
|
| | pf:SpoIIM | Stage II sporulation protein M
|
| | pf:Spore_coat_CotO | Spore coat protein CotO
|
| | pf:TCTP | Translationally controlled tumour protein
|
| | pf:TM1586_NiRdase | Putative TM nitroreductase
|
| | pf:TOBE_2 | TOBE domain
|
| | pf:TPR_1 | Tetratricopeptide repeat
|
| | pf:TPR_10 | Tetratricopeptide repeat
|
| | pf:TPR_11 | TPR repeat
|
| | pf:TPR_12 | Tetratricopeptide repeat
|
| | pf:TPR_2 | Tetratricopeptide repeat
|
| | pf:TPR_7 | Tetratricopeptide repeat
|
| | pf:TPR_8 | Tetratricopeptide repeat
|
| | pf:TPR_MalT | |
| | pf:Terminase_4 | Phage terminase, small subunit
|
| | pf:Terminase_5 | Putative ATPase subunit of terminase (gpP-like)
|
| | pf:TetR_N | Bacterial regulatory proteins, tetR family
|
| | pf:Thiolase_N | Thiolase, N-terminal domain
|
| | pf:Thymidylate_kin | Thymidylate kinase
|
| | pf:Tmemb_cc2 | Predicted transmembrane and coiled-coil 2 protein
|
| | pf:TrmB | Sugar-specific transcriptional regulator TrmB
|
| | pf:TsaE | Threonylcarbamoyl adenosine biosynthesis protein TsaE
|
| | pf:UDPGT | UDP-glucoronosyl and UDP-glucosyl transferase
|
| | pf:UDPG_MGDP_dh_N | UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
|
| | pf:UPF0758_N | |
| | pf:UVR | UvrB/uvrC motif
|
| | pf:UvrC_RNaseH_dom | |
| | pf:UvrD-helicase | UvrD/REP helicase N-terminal domain
|
| | pf:UvrD_C | UvrD-like helicase C-terminal domain
|
| | pf:UvrD_C_2 | UvrD-like helicase C-terminal domain
|
| | pf:V-set | Immunoglobulin V-set domain
|
| | pf:VATC | |
| | pf:VGPC1_C | C-terminal membrane-localisation domain of ion-channel, VCN1
|
| | pf:VWA | von Willebrand factor type A domain
|
| | pf:VWA_2 | von Willebrand factor type A domain
|
| | pf:VirC1 | VirC1 protein
|
| | pf:WAK | Wall-associated kinase
|
| | pf:YbbR | YbbR-like protein
|
| | pf:ZapB | Cell division protein ZapB
|
| | pf:Zeta_toxin | Zeta toxin
|
| | pf:Zn_Tnp_IS1595 | Transposase zinc-ribbon domain
|
| | pf:adh_short | short chain dehydrogenase
|
| | pf:adh_short_C2 | Enoyl-(Acyl carrier protein) reductase
|
| | pf:cEGF | Complement Clr-like EGF-like
|
| | pf:cobW | CobW/HypB/UreG, nucleotide-binding domain
|
| | pf:ig | Immunoglobulin domain
|
| | pf:ketoacyl-synt | Beta-ketoacyl synthase, N-terminal domain
|
| | pf:nSTAND1 | |
| | pf:nSTAND3 | |
| | pf:p450 | Cytochrome P450
|
| | pf:tRNA_anti-codon | OB-fold nucleic acid binding domain
|
| | pf:tRNA_anti_2 | OB-fold nucleic acid binding domain
|
| | pf:zf-MYND | MYND finger
|