Search common motifs in selected sequences


  
Motifs : pf:2-oxoacid_dh2-oxoacid dehydrogenases acyltransferase (catalytic domain)
 pf:AAA_16AAA ATPase domain
 pf:AAA_18AAA domain
 pf:AAA_22AAA domain
 pf:AAA_28AAA domain
 pf:AAA_33AAA domain
 pf:APOC4Apolipoprotein C4
 pf:ASH2L-like_WH
 pf:AldedhAldehyde dehydrogenase family
 pf:Amidohydro_1Amidohydrolase family
 pf:Amidohydro_3Amidohydrolase family
 pf:BRCTBRCA1 C Terminus (BRCT) domain
 pf:Biotin_lipoylBiotin-requiring enzyme
 pf:C1_1Phorbol esters/diacylglycerol binding domain (C1 domain)
 pf:CbiACobQ/CobB/MinD/ParA nucleotide binding domain
 pf:CheRCheR methyltransferase, SAM binding domain
 pf:CorACorA-like Mg2+ transporter protein
 pf:Cytidylate_kinCytidylate kinase
 pf:DAOFAD dependent oxidoreductase
 pf:DEADDEAD/DEAH box helicase
 pf:DEAD_assocDEAD/H associated
 pf:DNA_ligase_OBNAD-dependent DNA ligase OB-fold domain
 pf:DNA_ligase_ZBDNAD-dependent DNA ligase C4 zinc finger domain
 pf:DNA_ligase_adenNAD-dependent DNA ligase adenylation domain
 pf:DUF1942Domain of unknown function (DUF1942)
 pf:DUF2564Protein of unknown function (DUF2564)
 pf:DUF4139Domain of unknown function (DUF4139)
 pf:DUF4140N-terminal domain of unknown function (DUF4140)
 pf:DUF4148Domain of unknown function (DUF4148)
 pf:DUF6119
 pf:DUF6247
 pf:DUF6511
 pf:DUF742Protein of unknown function (DUF742)
 pf:DUF948Bacterial protein of unknown function (DUF948)
 pf:Dppa2_ADppa2/4 conserved region in higher vertebrates
 pf:E1-E2_ATPaseE1-E2 ATPase
 pf:E3_bindinge3 binding domain
 pf:FAD_binding_2FAD binding domain
 pf:FerritinFerritin-like domain
 pf:GerEBacterial regulatory proteins, luxR family
 pf:GldM_1st
 pf:GntRBacterial regulatory proteins, gntR family
 pf:HAMPHAMP domain
 pf:HAP1_NHAP1 N-terminal conserved region
 pf:HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HATPase_c_2Histidine kinase-like ATPase domain
 pf:HATPase_c_5GHKL domain
 pf:HHHHelix-hairpin-helix motif
 pf:HHH_2Helix-hairpin-helix motif
 pf:HHH_5Helix-hairpin-helix domain
 pf:HI0933_likeHI0933-like protein
 pf:HMAHeavy-metal-associated domain
 pf:HTH_1Bacterial regulatory helix-turn-helix protein, lysR family
 pf:HTH_20Helix-turn-helix domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_24Winged helix-turn-helix DNA-binding
 pf:HTH_38Helix-turn-helix domain
 pf:HTH_Crp_2Crp-like helix-turn-helix domain
 pf:HTH_IclRIclR helix-turn-helix domain
 pf:HWE_HKHWE histidine kinase
 pf:Helicase_CHelicase conserved C-terminal domain
 pf:Helo_like_NFungal N-terminal domain of STAND proteins
 pf:HisKAHis Kinase A (phospho-acceptor) domain
 pf:Hydrolasehaloacid dehalogenase-like hydrolase
 pf:Hydrolase_3haloacid dehalogenase-like hydrolase
 pf:IPPTIPP transferase
 pf:IPTIsopentenyl transferase
 pf:Importin_rep_3
 pf:KfrA_NPlasmid replication region DNA-binding N-term
 pf:LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain
 pf:Lhr_WH
 pf:LysR_substrateLysR substrate binding domain
 pf:MCPsignalMethyl-accepting chemotaxis protein (MCP) signalling domain
 pf:Methyltransf_11Methyltransferase domain
 pf:Methyltransf_12Methyltransferase domain
 pf:Methyltransf_25Methyltransferase domain
 pf:Mtf2_CPolycomb-like MTF2 factor 2
 pf:NAD_binding_8NAD(P)-binding Rossmann-like domain
 pf:NatA_aux_su
 pf:PFOR_IIPyruvate:ferredoxin oxidoreductase core domain II
 pf:PGM_PMM_IPhosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
 pf:PHDPHD-finger
 pf:PL48Filopodia upregulated, FAM65
 pf:PORPyruvate ferredoxin/flavodoxin oxidoreductase
 pf:POR_NPyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
 pf:PPTAProtein prenyltransferase alpha subunit repeat
 pf:PTCB-BRCTtwin BRCT domain
 pf:PadRTranscriptional regulator PadR-like family
 pf:Peptidase_M13_NPeptidase family M13
 pf:Peptidase_M48Peptidase family M48
 pf:Peptidase_M56BlaR1 peptidase M56
 pf:Peptidase_M78
 pf:Phage_integrasePhage integrase family
 pf:PhoHPhoH-like protein
 pf:PilZPilZ domain
 pf:PqqDCoenzyme PQQ synthesis protein D (PqqD)
 pf:Prok-JABProkaryotic homologs of the JAB domain
 pf:Prok-RING_1Prokaryotic RING finger family 1
 pf:Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductase
 pf:RNA_ligaseRNA ligase
 pf:Rad52_Rad22Rad52/22 family double-strand break repair protein
 pf:Rad9_Rad53_bindFungal Rad9-like Rad53-binding
 pf:RecR_HhH
 pf:ResIIIType III restriction enzyme, res subunit
 pf:Response_regResponse regulator receiver domain
 pf:RhoGAPRhoGAP domain
 pf:RmuCRmuC family
 pf:Sigma70_r4Sigma-70, region 4
 pf:Sigma70_r4_2Sigma-70, region 4
 pf:TPR-S
 pf:TPR_1Tetratricopeptide repeat
 pf:TPR_11TPR repeat
 pf:TPR_12Tetratricopeptide repeat
 pf:TPR_14Tetratricopeptide repeat
 pf:TPR_17Tetratricopeptide repeat
 pf:TPR_2Tetratricopeptide repeat
 pf:TPR_7Tetratricopeptide repeat
 pf:TPR_8Tetratricopeptide repeat
 pf:TarHTar ligand binding domain homologue
 pf:TetR_C_31
 pf:ThiFThiF family
 pf:TniBBacterial TniB protein
 pf:Tudor_2
 pf:VATC
 pf:YHSYHS domain
 pf:YacG
 pf:vRNAP_plug
 pf:zf-FCSMYM-type Zinc finger with FCS sequence motif
 pf:zf-FLZzinc-finger of the FCS-type, C2-C2

acid:CBP33_08415 pf:DUF6511

acz:Acaty_c0098 pf:DUF6511

adk:Alide2_2005 pf:DUF6511

afy:BW247_08680 pf:DUF6511

agif:122847645 pf:Tudor_2 pf:Rad9_Rad53_bind pf:C1_1 pf:Prok-RING_1 pf:PHD pf:ASH2L-like_WH pf:PHD pf:Mtf2_C


bbag:E1O_17400 pf:DUF6511

bhg:I6G56_27365 pf:CheR pf:Methyltransf_12 pf:Methyltransf_11 pf:Methyltransf_25 pf:TPR_2 pf:TPR_8 pf:TPR_1 pf:TPR_7 pf:TPR_17

blat:WK25_15200 pf:DUF6511 pf:Rad52_Rad22

boj:CBF45_12220 pf:DUF6511

bpsn:NIK97_13230 pf:DUF6511 pf:vRNAP_plug

btd:BTI_5116 pf:CheR pf:Methyltransf_12 pf:Methyltransf_11 pf:Methyltransf_25 pf:TPR-S pf:NatA_aux_su pf:TPR_2 pf:TPR_8 pf:TPR_1 pf:TPR_7 pf:TPR_14 pf:TPR_12 pf:TPR_11 pf:PPTA pf:TPR_17

bud:AQ610_29825 pf:CheR pf:Methyltransf_12 pf:Methyltransf_11 pf:Methyltransf_25 pf:TPR_2 pf:TPR_8 pf:TPR_1 pf:TPR_7 pf:TPR_17

bul:BW21_4653 pf:CheR pf:Methyltransf_12 pf:Methyltransf_11 pf:Methyltransf_25 pf:TPR_2 pf:TPR_8 pf:TPR_1 pf:TPR_7 pf:TPR_17

bvi:Bcep1808_3264 pf:DUF6511

cbab:SMCB_0713 pf:DUF6511

cgd:CR3_2708 pf:DUF6511

chic:N8I74_05380 pf:DUF6511

cmar:IMCC12053_58 pf:DUF6511

daa:AKL17_2597 pf:DUF6511

dex:HWD60_20370 pf:Peptidase_M13_N pf:DUF6511

dia:Dtpsy_3224 pf:DUF6511

doe:DENOEST_0029 pf:DUF6511

fam:OYT1_ch1246 pf:YHS pf:DUF6511

gce:KYE46_01500 pf:DUF4140 pf:KfrA_N pf:DUF4139

hahh:O5O45_31820 pf:DUF6511

halq:Hrr1229_016555 pf:zf-FLZ pf:HMA pf:E1-E2_ATPase pf:Hydrolase pf:Hydrolase_3

hch:HCH_05687 pf:DUF6511

hyb:Q5W_04720 pf:DUF6511

jeu:BJP62_04910 pf:DUF6511

lbd:127277349 pf:Tudor_2 pf:Rad9_Rad53_bind pf:C1_1 pf:Prok-RING_1 pf:PHD pf:ASH2L-like_WH pf:PHD pf:C1_1 pf:Mtf2_C

lht:122506908 pf:Tudor_2 pf:Prok-RING_1 pf:C1_1 pf:PHD pf:ASH2L-like_WH pf:PHD pf:C1_1 pf:Mtf2_C

llut:K1X41_06845 pf:Aldedh

mag:amb1151 pf:YacG pf:DUF6511 pf:HWE_HK

mca:MCA2645 pf:DUF6511

meso:BSQ44_03840 pf:PL48 pf:DUF6511

met:M446_0744 pf:CorA pf:HAMP pf:RmuC pf:DUF948 pf:GldM_1st pf:HAP1_N pf:Helo_like_N pf:MCPsignal pf:PilZ

mgo:AFA91_23655 pf:Ferritin pf:TetR_C_31

mgry:MSR1_37660 pf:DUF6511 pf:APOC4

miz:BAB75_00250 pf:Phage_integrase

mmeo:OOT43_09075 pf:YacG pf:DUF6511

mms:mma_2693 pf:DUF6511

nde:NIDE0084 pf:DUF6511

nmar:HPC71_03585 pf:AAA_16 pf:IPT pf:AAA_22 pf:AAA_33 pf:AAA_28 pf:Cytidylate_kin pf:AAA_18 pf:IPPT

npv:OHM77_07065 pf:DUF6511

oca:OCAR_4805 pf:DUF6511 pf:Importin_rep_3

ocg:OCA5_c31450 pf:zf-FCS pf:VATC pf:DUF6511

oco:OCA4_c30930 pf:zf-FCS pf:VATC pf:DUF6511

otd:J1M35_18425 pf:DUF6119 pf:DUF6511 pf:DUF6247

pamn:JCM7685_0243 pf:DUF6511

pbap:Pla133_52610 pf:Prok-JAB pf:ThiF

pbh:AAW51_3965 pf:VATC pf:DUF6511

pbm:CL52_16460 pf:DUF6511

pcon:B0A89_12750 pf:DUF6511

pfeo:E3U26_03665 pf:DUF6511

pgv:SL003B_4063 pf:PL48 pf:DUF6511

pkt:AT984_05745 pf:DUF6511

prb:X636_18845 pf:DUF6511

psan:HGN31_01875 pf:YacG pf:DUF2564 pf:DUF6511

psin:CAK95_03020 pf:zf-FCS pf:VATC pf:DUF6511

pstl:JHW45_11360 pf:DUF6511

rbd:ALSL_2440 pf:DUF6511

rbh:B4966_10500 pf:DUF6511

rbu:PG1C_00445 pf:DUF6511

rce:RC1_0049 pf:DUF6511

rdi:CMV14_07825 pf:HAMP pf:HisKA pf:HATPase_c pf:HATPase_c_5

rhoa:HZ993_07505 pf:DUF6511 pf:Dppa2_A

rht:NT26_3228 pf:HTH_1 pf:HTH_IclR pf:LysR_substrate

rnc:GO999_12195 pf:DUF6511

rpu:CDC45_16520 pf:DUF6511

rsl:RPSI07_0213 pf:DUF6511

rsm:CMR15_30049 pf:DUF6511

rsn:RSPO_c02524 pf:DUF6511

rso:RSc3233 pf:DUF6511

rsy:RSUY_46810 pf:DUF6511

sact:DMT42_14140 pf:CbiA

sakb:K1J60_21680 pf:Biotin_lipoyl pf:E3_binding pf:2-oxoacid_dh pf:DUF1942

samb:SAM23877_5397 pf:DAO pf:FAD_binding_2 pf:HI0933_like pf:Pyr_redox_2 pf:NAD_binding_8

scb:SCAB_56631 pf:Amidohydro_3 pf:Amidohydro_1 pf:Amidohydro_3

sci:B446_10790 pf:LON_substr_bdg

scyg:S1361_11340 pf:LON_substr_bdg

shon:118997356 pf:RhoGAP

shum:STHU_46670 pf:POR pf:POR_N pf:PFOR_II

sinc:DAIF1_15720 pf:PhoH pf:DEAD pf:ResIII pf:Helicase_C pf:Lhr_WH pf:DEAD_assoc pf:GntR

slac:SKTS_30810 pf:DUF6511

snah:OUQ99_07060 pf:Peptidase_M48 pf:Peptidase_M56 pf:Peptidase_M78

sphd:HY78_19630 pf:TarH pf:HAMP pf:HisKA pf:HATPase_c pf:HATPase_c_2 pf:HATPase_c_5

splb:SFPGR_20420 pf:DUF6511

sroc:RGF97_25740 pf:LON_substr_bdg

sta:STHERM_c08170 pf:DNA_ligase_aden pf:RNA_ligase pf:DNA_ligase_OB pf:DNA_ligase_ZBD pf:HHH_5 pf:HHH_2 pf:HHH_5 pf:HHH pf:RecR_HhH pf:BRCT pf:PTCB-BRCT

stee:F3L20_02030 pf:Response_reg pf:DUF742 pf:Sigma70_r4_2 pf:GerE pf:Sigma70_r4 pf:HTH_38 pf:HTH_23 pf:HTH_24

stem:CLM74_08400 pf:PhoH pf:DEAD pf:ResIII pf:Helicase_C pf:Lhr_WH pf:DEAD_assoc pf:GntR

strf:ASR50_10035 pf:LON_substr_bdg

swi:Swit_1387 pf:TarH pf:HAMP pf:HisKA pf:HATPase_c pf:HATPase_c_2 pf:HATPase_c_5

talx:FOF52_10870 pf:Peptidase_M48 pf:Peptidase_M56 pf:TniB pf:Peptidase_M78

tfu:Tfu_2172 pf:Peptidase_M48 pf:Peptidase_M56 pf:Peptidase_M78

thao:NI17_013480 pf:Peptidase_M48 pf:Peptidase_M56 pf:TniB pf:Peptidase_M78

thi:THI_1932 pf:DUF6511

thic:TspCOW1_01910 pf:zf-FCS pf:PGM_PMM_I pf:DUF6511

ume:RM788_30830 pf:PqqD pf:HTH_20 pf:PadR pf:HTH_Crp_2 pf:DUF4148

zpa:C3497_09855 pf:DUF6511