Search common motifs in selected sequences


  
Motifs : pf:DNA_pol_ADNA polymerase family A
 pf:DUF3458_C
 pf:DUF3606Protein of unknown function (DUF3606)
 pf:DUF5677
 pf:DUF6507
 pf:GP3_packageDNA-packaging protein gp3
 pf:HTH_1Bacterial regulatory helix-turn-helix protein, lysR family
 pf:HTH_19Helix-turn-helix domain
 pf:HTH_26Cro/C1-type HTH DNA-binding domain
 pf:HTH_28Helix-turn-helix domain
 pf:HTH_29Winged helix-turn helix
 pf:HTH_3Helix-turn-helix
 pf:HTH_31Helix-turn-helix domain
 pf:HTH_35Winged helix-turn-helix DNA-binding
 pf:HTH_6Helix-turn-helix domain, rpiR family
 pf:HTH_7Helix-turn-helix domain of resolvase
 pf:HTH_8Bacterial regulatory protein, Fis family
 pf:HTH_Crp_2Crp-like helix-turn-helix domain
 pf:HTH_IclRIclR helix-turn-helix domain
 pf:HTH_Tnp_1Transposase
 pf:ImmE5Colicin-E5 Imm protein
 pf:LZ_Tnp_IS481leucine-zipper of insertion element IS481
 pf:LacIBacterial regulatory proteins, lacI family
 pf:MarR_2MarR family
 pf:MtrHTetrahydromethanopterin S-methyltransferase MtrH subunit
 pf:NUFIP1Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)
 pf:PCC
 pf:Phage_CI_reprBacteriophage CI repressor helix-turn-helix domain
 pf:Phage_CP76Phage regulatory protein CII (CP76)
 pf:RPTA repeated domain in UCH-protein
 pf:SIP1Survival motor neuron (SMN) interacting protein 1 (SIP1)
 pf:Sdh5Flavinator of succinate dehydrogenase
 pf:T2SS_PulS_OutSType II secretion system pilotin lipoprotein (PulS_OutS)
 pf:TPR_16Tetratricopeptide repeat
 pf:TetR_C_28
 pf:TetR_NBacterial regulatory proteins, tetR family
 pf:YdaS_toxin
 pf:YidB
 pf:ZnuAZinc-uptake complex component A periplasmic
 pf:dnstrm_HI1420

acij:JS278_03036 pf:dnstrm_HI1420 pf:TPR_16 pf:Phage_CP76 pf:HTH_8 pf:HTH_26 pf:HTH_3 pf:HTH_31

acu:Atc_1549 pf:dnstrm_HI1420 pf:MtrH pf:HTH_35 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

acz:Acaty_c1315 pf:dnstrm_HI1420 pf:MtrH pf:HTH_35 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

afe:Lferr_1332 pf:dnstrm_HI1420 pf:PCC pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_26

afj:AFERRID_24210 pf:dnstrm_HI1420 pf:PCC pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_26

amim:MIM_c07820 pf:dnstrm_HI1420 pf:HTH_35 pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

amr:AM1_1041 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

ars:ADJ73_14225 pf:dnstrm_HI1420 pf:HTH_35 pf:Phage_CP76 pf:HTH_28 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31 pf:TetR_N

atw:C0099_14805 pf:dnstrm_HI1420 pf:PCC pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_31 pf:HTH_26

bac:BamMC406_3672 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

baen:L3V59_33865 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bam:Bamb_5507 pf:dnstrm_HI1420 pf:DUF3458_C pf:HTH_3 pf:HTH_26

bcen:DM39_4360 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bceo:I35_4713 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcep:APZ15_20355 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcew:DM40_3787 pf:dnstrm_HI1420 pf:DUF3458_C pf:RPT pf:HTH_3 pf:HTH_26

bch:Bcen2424_3780 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcj:BCAM0815 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcm:Bcenmc03_3743 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bcon:NL30_21735 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bct:GEM_4985 pf:dnstrm_HI1420 pf:DUF3458_C pf:HTH_3 pf:HTH_26

bdf:WI26_17710 pf:dnstrm_HI1420 pf:DUF3458_C pf:HTH_3 pf:HTH_26

bfn:OI25_4005 pf:dnstrm_HI1420 pf:GP3_package pf:HTH_3 pf:HTH_31 pf:HTH_26 pf:HTH_7

blat:WK25_21515 pf:dnstrm_HI1420 pf:DUF3458_C pf:RPT pf:HTH_3 pf:HTH_26

bmec:WJ16_23050 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bmj:BMULJ_03562 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bmk:DM80_4124 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bmu:Bmul_4952 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bmul:NP80_3768 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bpsl:WS57_09955 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bpyr:ABD05_17705 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bstg:WT74_23115 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bstl:BBJ41_31755 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

btei:WS51_02395 pf:dnstrm_HI1420 pf:DUF3458_C pf:HTH_3 pf:HTH_26

bub:BW23_4538 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

buk:MYA_3866 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bur:Bcep18194_B2314 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bve:AK36_4528 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

bvi:Bcep1808_4167 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

cef:CE2748 pf:dnstrm_HI1420 pf:T2SS_PulS_OutS pf:Phage_CP76 pf:HTH_28 pf:HTH_8 pf:HTH_3 pf:HTH_31 pf:HTH_7

chel:AL346_13755 pf:dnstrm_HI1420 pf:PCC pf:HTH_35 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_7

chre:IE160_05010 pf:dnstrm_HI1420 pf:DUF3606 pf:MarR_2 pf:HTH_28 pf:HTH_8 pf:HTH_26 pf:HTH_3 pf:HTH_31 pf:HTH_6

cwa:CwatDRAFT_0690 pf:dnstrm_HI1420 pf:HTH_8 pf:Phage_CP76 pf:HTH_35 pf:HTH_3 pf:HTH_26

dcs:ISN74_00165 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_26

hak:KO116_01599 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

halw:B6N23_00185 pf:Sdh5 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_19 pf:HTH_31 pf:HTH_7

hash:HXW73_04655 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

hnp:SR894_13485 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

hol:HORIV_46550 pf:dnstrm_HI1420 pf:NUFIP1 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

hpro:LMS44_15235 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

htt:HZS52_12885 pf:dnstrm_HI1420 pf:DUF5677 pf:MtrH pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

jie:OH818_28035 pf:dnstrm_HI1420 pf:ImmE5 pf:DUF3606 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

kim:G3T16_06770 pf:dnstrm_HI1420 pf:GP3_package pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_19 pf:HTH_3 pf:HTH_26 pf:Phage_CI_repr pf:TetR_N pf:HTH_31 pf:HTH_7

kro:BVG79_p3000008 pf:dnstrm_HI1420 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

lck:HN018_25945 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

maad:AZF01_23210 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_Crp_2 pf:HTH_26 pf:HTH_31

maur:BOH66_03425 pf:dnstrm_HI1420 pf:TPR_16 pf:YidB pf:HTH_35 pf:HTH_IclR pf:Phage_CP76 pf:HTH_26 pf:HTH_8 pf:HTH_3 pf:HTH_31

mhum:NNL39_00195 pf:dnstrm_HI1420 pf:TPR_16 pf:DUF6507 pf:HTH_35 pf:Phage_CP76 pf:HTH_8 pf:HTH_IclR pf:HTH_26 pf:HTH_3 pf:HTH_31 pf:HTH_7

mlut:JET14_21120 pf:dnstrm_HI1420 pf:HTH_26 pf:HTH_35 pf:HTH_Crp_2 pf:HTH_3 pf:HTH_31

mmed:Mame_04993 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_Crp_2 pf:HTH_26 pf:HTH_31

noc:Noc_0449 pf:dnstrm_HI1420 pf:ZnuA pf:HTH_8 pf:HTH_3 pf:HTH_26

nre:BES08_29955 pf:dnstrm_HI1420 pf:YidB pf:HTH_35 pf:HTH_3 pf:HTH_26

oah:DR92_4454 pf:dnstrm_HI1420 pf:HTH_35 pf:Phage_CP76 pf:HTH_29 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

orn:DV701_01420 pf:dnstrm_HI1420 pf:DNA_pol_A pf:SIP1 pf:TetR_C_28 pf:HTH_35 pf:Phage_CP76 pf:HTH_28 pf:HTH_8 pf:HTH_3 pf:HTH_31 pf:TetR_N

palv:KSS97_03220 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_19 pf:HTH_26 pf:HTH_31

pcas:LOY40_02345 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_19 pf:HTH_26 pf:HTH_31

pfg:AB870_24475 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_31

pfo:Pfl01_0420 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_26 pf:HTH_31 pf:HTH_7

phl:KKY_686 pf:dnstrm_HI1420 pf:PCC pf:Phage_CP76 pf:HTH_35 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31

pke:DLD99_02405 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_26 pf:HTH_31 pf:HTH_7

plq:AA042_12105 pf:dnstrm_HI1420 pf:HTH_31 pf:HTH_35 pf:HTH_8 pf:HTH_3 pf:HTH_19 pf:TetR_N pf:HTH_26 pf:HTH_7

plu:plu2706 pf:dnstrm_HI1420 pf:HTH_IclR pf:Phage_CP76 pf:HTH_3 pf:HTH_19 pf:HTH_7 pf:HTH_31 pf:HTH_26

plum:A4R40_13475 pf:dnstrm_HI1420 pf:HTH_IclR pf:Phage_CP76 pf:HTH_3 pf:HTH_19 pf:HTH_7 pf:HTH_31 pf:HTH_26

pmed:E3Z27_02160 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_19 pf:HTH_31 pf:HTH_26

pmeh:JWJ88_13085 pf:dnstrm_HI1420 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

prop:QQ658_12830 pf:dnstrm_HI1420 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_26 pf:HTH_29 pf:HTH_3 pf:HTH_31 pf:HTH_7

psg:G655_05920 pf:dnstrm_HI1420 pf:HTH_35 pf:Phage_CP76 pf:HTH_29 pf:HTH_3 pf:HTH_26 pf:HTH_31

psil:PMA3_01555 pf:dnstrm_HI1420 pf:HTH_1 pf:HTH_35 pf:HTH_8 pf:TetR_N pf:HTH_3 pf:HTH_31 pf:HTH_26 pf:HTH_7 pf:HTH_19

pstw:DSJ_17530 pf:dnstrm_HI1420 pf:HTH_Tnp_1 pf:Phage_CP76 pf:YdaS_toxin pf:LZ_Tnp_IS481 pf:HTH_8 pf:HTH_3 pf:HTH_19 pf:TetR_N pf:HTH_31 pf:LacI pf:HTH_7 pf:HTH_26

ptt:VY86_13890 pf:dnstrm_HI1420 pf:DUF5677 pf:HTH_35 pf:Phage_CP76 pf:HTH_29 pf:HTH_8 pf:HTH_3 pf:HTH_26 pf:HTH_31 pf:HTH_7

ptw:TUM18999_41670 pf:dnstrm_HI1420 pf:HTH_IclR pf:HTH_3 pf:HTH_19 pf:HTH_31 pf:HTH_26 pf:HTH_7

ptz:HU718_003125 pf:dnstrm_HI1420 pf:HTH_35 pf:HTH_3 pf:HTH_19 pf:HTH_31 pf:HTH_26 pf:HTH_7

rant:RHODO2019_18885 pf:dnstrm_HI1420 pf:YidB pf:Phage_CP76 pf:HTH_8 pf:HTH_3 pf:HTH_31 pf:HTH_7

rin:ACS15_5529 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26

rnc:GO999_22595 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_31

rpm:RSPPHO_00073 pf:dnstrm_HI1420 pf:PCC pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

rpu:CDC45_17960 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_31

rse:F504_3548 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_31

rsg:JK151_22845 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_7

rsl:RPSI07_mp0060 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_7

sbd:ATN00_21795 pf:dnstrm_HI1420 pf:YidB pf:HTH_29 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

sdf:ACG33_07305 pf:dnstrm_HI1420

sphd:HY78_29725 pf:dnstrm_HI1420 pf:YidB pf:HTH_29 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

tun:J9260_10105 pf:dnstrm_HI1420 pf:HTH_3 pf:HTH_26 pf:HTH_7

xce:Xcel_3267 pf:dnstrm_HI1420 pf:HTH_Tnp_1 pf:Phage_CP76 pf:HTH_8 pf:HTH_26 pf:TetR_N pf:HTH_3 pf:Phage_CI_repr pf:HTH_7 pf:HTH_31 pf:HTH_6

xfa:XF_1702 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xff:XFLM_11700 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xfl:P303_08740 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xfn:XfasM23_1254 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xfs:D934_06750 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31

xft:PD_1177 pf:dnstrm_HI1420 pf:HTH_29 pf:Phage_CP76 pf:HTH_8 pf:HTH_35 pf:HTH_3 pf:HTH_26 pf:HTH_31