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Motifs : | pf:5_3_exonuc | 5'-3' exonuclease, C-terminal SAM fold
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| pf:AAA_5 | AAA domain (dynein-related subfamily)
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| pf:ABATE | Putative stress-induced transcription regulator
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| pf:ABC2_membrane | ABC-2 type transporter
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| pf:ABC2_membrane_3 | ABC-2 family transporter protein
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| pf:ABC2_membrane_5 | ABC-2 family transporter protein
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| pf:ABC_tran_CTD | ABC transporter C-terminal domain
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| pf:AIP3 | Actin interacting protein 3
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| pf:ALIX_LYPXL_bnd | ALIX V-shaped domain binding to HIV
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| pf:ANAPC4 | Anaphase-promoting complex, cyclosome, subunit 4
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| pf:ANIS5_cation-bd | |
| pf:APG6_N | |
| pf:ATG16 | Autophagy protein 16 (ATG16)
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| pf:ATG17_like | |
| pf:Allexi_40kDa | Allexivirus 40kDa protein
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| pf:AnfO_nitrog | Iron only nitrogenase protein AnfO (AnfO_nitrog)
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| pf:ApoA-II | Apolipoprotein A-II (ApoA-II)
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| pf:ApoLp-III | Apolipophorin-III precursor (apoLp-III)
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| pf:Apolipoprotein | Apolipoprotein A1/A4/E domain
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| pf:BAR_3 | BAR domain of APPL family
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| pf:BLOC1S3 | Biogenesis of lysosome-related organelles complex 1 subunit 3
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| pf:BLOC1_2 | Biogenesis of lysosome-related organelles complex-1 subunit 2
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| pf:BORCS6 | |
| pf:BORCS7 | |
| pf:Baculo_PEP_C | Baculovirus polyhedron envelope protein, PEP, C terminus
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| pf:CALCOCO1 | Calcium binding and coiled-coil domain (CALCOCO1) like
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| pf:CAMP_factor | CAMP factor (Cfa)
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| pf:CATRA-C | |
| pf:CCDC22_CC | |
| pf:CCDC93_CC | |
| pf:CDC24 | CDC24 Calponin
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| pf:CEP63 | Centrosomal protein of 63 kDa
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| pf:COG2 | COG (conserved oligomeric Golgi) complex component, COG2
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| pf:COG3_N | |
| pf:COG5_N | |
| pf:COG6_N | |
| pf:CREPT | Cell-cycle alteration and expression-elevated protein in tumour
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| pf:CRR7 | Protein CHLORORESPIRATORY REDUCTION 7
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| pf:Caldesmon | Caldesmon
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| pf:CbiM | Cobalt uptake substrate-specific transmembrane region
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| pf:ChAPs | ChAPs (Chs5p-Arf1p-binding proteins)
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| pf:Chordopox_A13L | Chordopoxvirus A13L protein
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| pf:Cnn_1N | Centrosomin N-terminal motif 1
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| pf:Cob_adeno_trans | Cobalamin adenosyltransferase
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| pf:Cor1 | Cor1/Xlr/Xmr conserved region
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| pf:CorA | CorA-like Mg2+ transporter protein
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| pf:CpxA_peri | Two-component sensor protein CpxA, periplasmic domain
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| pf:Crescentin | |
| pf:Cytochrom_B562 | Cytochrome b562
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| pf:DASH_Dad4 | DASH complex subunit Dad4
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| pf:DASH_Duo1 | DASH complex subunit Duo1
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| pf:DASH_Spc19 | Spc19
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| pf:DC_STAMP | DC-STAMP-like protein
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| pf:DTX3L_a-b | |
| pf:DUF1477 | Protein of unknown function (DUF1477)
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| pf:DUF1664 | Protein of unknown function (DUF1664)
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| pf:DUF1722 | Protein of unknown function (DUF1722)
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| pf:DUF1804 | Protein of unknown function (DUF1804)
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| pf:DUF2070 | Predicted membrane protein (DUF2070)
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| pf:DUF2089 | Protein of unknown function (DUF2089)
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| pf:DUF2130 | Uncharacterized protein conserved in bacteria (DUF2130)
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| pf:DUF2157 | Predicted membrane protein (DUF2157)
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| pf:DUF2203 | Uncharacterized conserved protein (DUF2203)
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| pf:DUF2408 | Protein of unknown function (DUF2408)
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| pf:DUF2452 | Protein of unknown function (DUF2452)
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| pf:DUF2537 | Protein of unknown function (DUF2537)
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| pf:DUF2884 | Protein of unknown function (DUF2884)
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| pf:DUF2937 | Protein of unknown function (DUF2937)
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| pf:DUF2959 | Protein of unknown function (DUF2959)
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| pf:DUF3087 | Protein of unknown function (DUF3087)
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| pf:DUF3106 | Protein of unknown function (DUF3106)
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| pf:DUF3150 | Protein of unknown function (DUF3150)
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| pf:DUF3450 | Protein of unknown function (DUF3450)
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| pf:DUF3533 | Protein of unknown function (DUF3533)
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| pf:DUF3829 | Protein of unknown function (DUF3829)
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| pf:DUF3851 | Protein of unknown function (DUF3851)
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| pf:DUF4200 | Domain of unknown function (DUF4200)
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| pf:DUF4226 | Domain of unknown function (DUF4226)
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| pf:DUF4298 | Domain of unknown function (DUF4298)
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| pf:DUF4315 | Domain of unknown function (DUF4315)
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| pf:DUF4407 | Domain of unknown function (DUF4407)
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| pf:DUF445 | Protein of unknown function (DUF445)
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| pf:DUF4515 | Domain of unknown function (DUF4515)
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| pf:DUF4618 | Domain of unknown function (DUF4618)
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| pf:DUF5082 | Domain of unknown function (DUF5082)
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| pf:DUF5398 | |
| pf:DUF5446 | |
| pf:DUF5659 | |
| pf:DUF5684 | |
| pf:DUF5790 | |
| pf:DUF5798 | |
| pf:DUF6276 | |
| pf:DUF6468 | |
| pf:DUF6674 | |
| pf:DUF6744 | |
| pf:DUF677 | Protein of unknown function (DUF677)
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| pf:DUF6847 | |
| pf:DUF724 | Protein of unknown function (DUF724)
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| pf:DUF745 | Protein of unknown function (DUF745)
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| pf:DUF885 | Bacterial protein of unknown function (DUF885)
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| pf:DUF948 | Bacterial protein of unknown function (DUF948)
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| pf:DegQ | DegQ (SacQ) family
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| pf:DegS | Sensor protein DegS
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| pf:DnaG_cat_HB | |
| pf:Dynamin_M | Dynamin central region
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| pf:EXOC6_Sec15_N | |
| pf:EcoEI_R_C | EcoEI R protein C-terminal
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| pf:Endotoxin_M | delta endotoxin
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| pf:Exonuc_VII_L | Exonuclease VII, large subunit
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| pf:Exonuc_VII_S | Exonuclease VII small subunit
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| pf:EzrA | Septation ring formation regulator, EzrA
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| pf:FAM219A | Protein family FAM219A
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| pf:FAP206 | |
| pf:FBF1 | |
| pf:FH2 | Formin Homology 2 Domain
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| pf:FPP | Filament-like plant protein, long coiled-coil
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| pf:FapA | |
| pf:Fas_alpha_ACP | |
| pf:Fer4_NifH | 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
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| pf:Fez1 | Fez1
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| pf:Fib_alpha | Fibrinogen alpha/beta chain family
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| pf:Filament | Intermediate filament protein
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| pf:FliJ | Flagellar FliJ protein
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| pf:Fzo_mitofusin | fzo-like conserved region
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| pf:GAT | GAT domain
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| pf:GPDPase_memb | Membrane domain of glycerophosphoryl diester phosphodiesterase
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| pf:GapR_DNA-bd | |
| pf:GatB_Yqey | GatB domain
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| pf:GlnD_UR_UTase | GlnD PII-uridylyltransferase
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| pf:Gp-FAR-1 | Nematode fatty acid retinoid binding protein (Gp-FAR-1)
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| pf:GyrB_insert | |
| pf:HMD | H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase
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| pf:HMMR_N | Hyaluronan mediated motility receptor N-terminal
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| pf:HOOK | HOOK protein
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| pf:HSL_N | Hormone-sensitive lipase (HSL) N-terminus
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| pf:Helo_like_N | Fungal N-terminal domain of STAND proteins
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| pf:Herpes_BLRF2 | Herpesvirus BLRF2 protein
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| pf:HlyD_D23 | Barrel-sandwich domain of CusB or HlyD membrane-fusion
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| pf:Hmw_CFAP97 | |
| pf:HpHbR | |
| pf:Hrs_helical | Hepatocyte growth factor-regulated tyrosine kinase substrate
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| pf:HsbA | Hydrophobic surface binding protein A
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| pf:IFT20 | Intraflagellar transport complex B, subunit 20
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| pf:IFT57 | Intra-flagellar transport protein 57
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| pf:IL11 | Interleukin 11
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| pf:ISG65-75 | Invariant surface glycoprotein
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| pf:Iron_permease | Low affinity iron permease
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| pf:JetA | |
| pf:KxDL | Uncharacterized conserved protein
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| pf:LOH1CR12 | Tumour suppressor protein
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| pf:LURAP | Leucine rich adaptor protein
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| pf:LXG | LXG domain of WXG superfamily
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| pf:Laminin_I | Laminin Domain I
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| pf:Laminin_II | Laminin Domain II
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| pf:Leu_zip | Leucine zipper
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| pf:Lipoprotein_7 | Adhesin lipoprotein
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| pf:MAP65_ASE1 | Microtubule associated protein (MAP65/ASE1 family)
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| pf:MCPsignal | Methyl-accepting chemotaxis protein (MCP) signalling domain
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| pf:MIP-T3_C | |
| pf:Mce4_CUP1 | Cholesterol uptake porter CUP1 of Mce4, putative
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| pf:Med15_M | |
| pf:MitMem_reg | Maintenance of mitochondrial structure and function
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| pf:Mlp | Mlp lipoprotein family
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| pf:Mod_r | Modifier of rudimentary (Mod(r)) protein
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| pf:MscS_porin | Mechanosensitive ion channel porin domain
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| pf:Mt_ATP-synt_D | ATP synthase D chain, mitochondrial (ATP5H)
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| pf:Mt_ATP_synt | Mitochondrial ATP synthase subunit
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| pf:Muted | Organelle biogenesis, Muted-like protein
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| pf:Myosin_tail_1 | Myosin tail
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| pf:NAGLU_C | Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain
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| pf:NPV_P10 | Nucleopolyhedrovirus P10 protein
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| pf:Neugrin | Neugrin
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| pf:Noc2 | Noc2p family
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| pf:Nop | snoRNA binding domain, fibrillarin
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| pf:Nuf2_DHR10-like | |
| pf:PI3K_P85_iSH2 | Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
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| pf:PLU-1 | PLU-1-like protein
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| pf:PMEI | Plant invertase/pectin methylesterase inhibitor
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| pf:Peptidase_C39_2 | Peptidase_C39 like family
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| pf:Peptidase_M32 | Carboxypeptidase Taq (M32) metallopeptidase
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| pf:Perilipin | Perilipin family
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| pf:PhageMin_Tail | Phage-related minor tail protein
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| pf:Phage_GP20 | Phage minor structural protein GP20
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| pf:Phage_int_SAM_6 | |
| pf:PilN_bio_d | |
| pf:PqqD | Coenzyme PQQ synthesis protein D (PqqD)
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| pf:Prefoldin | Prefoldin subunit
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| pf:Prefoldin_2 | Prefoldin subunit
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| pf:Prominin | Prominin
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| pf:RNase_Y_N | |
| pf:Rab3-GAP_cat_C | |
| pf:Radial_spoke_3 | Radial spoke protein 3
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| pf:RapA_C | RNA polymerase recycling family C-terminal
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| pf:RasGAP_C | RasGAP C-terminus
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| pf:Relaxase_C | |
| pf:RseC_MucC | Positive regulator of sigma(E), RseC/MucC
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| pf:Rx_N | |
| pf:SH3BP5 | SH3 domain-binding protein 5 (SH3BP5)
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| pf:SKA1 | Spindle and kinetochore-associated protein 1
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| pf:SKA2 | Spindle and kinetochore-associated protein 2
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| pf:SYCE1 | Synaptonemal complex central element protein 1
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| pf:SduA_C | |
| pf:Sec3_CC | |
| pf:Sec8_N | |
| pf:Senescence | Senescence-associated protein
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| pf:SepF | |
| pf:SepSecS | O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS
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| pf:SesA | N-terminal domain on NACHT_NTPase and P-loop NTPases
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| pf:Snapin_Pallidin | Snapin/Pallidin
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| pf:Sos7 | |
| pf:Spectrin | Spectrin repeat
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| pf:SseC | Secretion system effector C (SseC) like family
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| pf:Suppressor_APC | Adenomatous polyposis coli tumour suppressor protein
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| pf:Syntaxin | Syntaxin
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| pf:Syntaxin-6_N | Syntaxin 6, N-terminal
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| pf:Syntaxin_2 | Syntaxin-like protein
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| pf:T3SSipB | Type III cell invasion protein SipB
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| pf:TACC_C | |
| pf:TBCC_N | Tubulin-specific chaperone C N-terminal domain
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| pf:TINF2_N | TERF1-interacting nuclear factor 2 N-terminus
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| pf:TMF_TATA_bd | TATA element modulatory factor 1 TATA binding
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| pf:TMPIT | TMPIT-like protein
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| pf:TMP_2 | Prophage tail length tape measure protein
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| pf:TMP_3 | |
| pf:TPR_MLP1_2 | TPR/MLP1/MLP2-like protein
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| pf:TRPM_tetra | Tetramerisation domain of TRPM
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| pf:Taxilin | Myosin-like coiled-coil protein
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| pf:TelA | Toxic anion resistance protein (TelA)
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| pf:TelK_muzzle | |
| pf:Tmemb_cc2 | Predicted transmembrane and coiled-coil 2 protein
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| pf:TolA_bind_tri | TolA binding protein trimerisation
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| pf:Tropomyosin | Tropomyosin
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| pf:UBA_4 | UBA-like domain
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| pf:UPF0242 | Uncharacterised protein family (UPF0242)
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| pf:V-SNARE | Vesicle transport v-SNARE protein N-terminus
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| pf:V-SNARE_C | Snare region anchored in the vesicle membrane C-terminus
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| pf:VPS28 | VPS28 protein
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| pf:VasL | Type VI secretion system, EvfB, or VasL
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| pf:Virulence_RhuM | Virulence protein RhuM family
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| pf:Vps53_N | Vps53-like, N-terminal
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| pf:WEMBL | Weak chloroplast movement under blue light
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| pf:WXG100 | Proteins of 100 residues with WXG
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| pf:Wbp11 | WW domain binding protein 11
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| pf:YPEB_N | |
| pf:YbaB_DNA_bd | YbaB/EbfC DNA-binding family
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| pf:YihI | Der GTPase activator (YihI)
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| pf:YkyA | Putative cell-wall binding lipoprotein
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| pf:YppG | YppG-like protein
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| pf:Yuri_gagarin | Yuri gagarin
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| pf:ZapA | Cell division protein ZapA
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| pf:ZapB | Cell division protein ZapB
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| pf:bZIP_1 | bZIP transcription factor
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