Search common motifs in selected sequences


  
Motifs : pf:BAHBAH domain
 pf:BeachBeige/BEACH domain
 pf:COG3_C
 pf:COMMD1_NCOMMD1 N-terminal domain
 pf:Clathrin_lg_chClathrin light chain
 pf:DUF2528Protein of unknown function (DUF2528)
 pf:DUF3867Protein of unknown function (DUF3867)
 pf:DUF4167Domain of unknown function (DUF4167)
 pf:DUF445Protein of unknown function (DUF445)
 pf:DUF5098Domain of unknown function (DUF5098)
 pf:DUF5433
 pf:DUF5677
 pf:DUF5783
 pf:DUF6120
 pf:DUF6262
 pf:ERM_C
 pf:FadAAdhesion protein FadA
 pf:FtsH_extFtsH Extracellular
 pf:FumaraseC_CFumarase C C-terminus
 pf:GAINGPCR-Autoproteolysis INducing (GAIN) domain
 pf:GPAT_NGlycerol-3-phosphate acyltransferase N-terminal
 pf:Gal-bind_lectinGalactoside-binding lectin
 pf:Glyco_hydr_30_2O-Glycosyl hydrolase family 30
 pf:HAD_2Haloacid dehalogenase-like hydrolase
 pf:HNOBHaem-NO-binding
 pf:HTH_17Helix-turn-helix domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_24Winged helix-turn-helix DNA-binding
 pf:HTH_29Winged helix-turn helix
 pf:HTH_36Helix-turn-helix domain
 pf:HTH_6Helix-turn-helix domain, rpiR family
 pf:HTH_7Helix-turn-helix domain of resolvase
 pf:HTH_AraCBacterial regulatory helix-turn-helix proteins, AraC family
 pf:HTH_Tnp_1Transposase
 pf:HTH_Tnp_1_2Helix-turn-helix of insertion element transposase
 pf:HrcAHrcA protein C terminal domain
 pf:IF2_NTranslation initiation factor IF-2, N-terminal region
 pf:Lin1244_N
 pf:Med27Mediator complex subunit 27
 pf:PCIPCI domain
 pf:PI4K_N
 pf:Phage_terminasePhage terminase small subunit
 pf:Phasin_2Phasin protein
 pf:Put_DNA-bind_NPutative DNA-binding protein N-terminus
 pf:REGB_T4Endoribonuclease RegB T4-bacteriophage encoded
 pf:RICTOR_MRapamycin-insensitive companion of mTOR, middle domain
 pf:Rep3_N
 pf:SLHS-layer homology domain
 pf:STASSTAS domain
 pf:SapB_1Saposin-like type B, region 1
 pf:SidF
 pf:Sigma70_r2Sigma-70 region 2
 pf:Sigma70_r4Sigma-70, region 4
 pf:Sigma70_r4_2Sigma-70, region 4
 pf:Sld3_N
 pf:Suv3_N
 pf:Tenui_NCPTenuivirus major non-capsid protein
 pf:TetR_C_10Tetracycline repressor, C-terminal all-alpha domain
 pf:TetR_C_11Bacterial transcriptional repressor C-terminal
 pf:TetR_C_13Bacterial transcriptional repressor C-terminal
 pf:TetR_C_17
 pf:TetR_C_2MAATS-type transcriptional repressor, C-terminal region
 pf:TetR_C_21
 pf:TetR_C_24
 pf:TetR_C_25
 pf:TetR_C_27
 pf:TetR_C_29
 pf:TetR_C_36
 pf:TetR_C_37
 pf:TetR_C_4YsiA-like protein, C-terminal region
 pf:TetR_C_42
 pf:TetR_C_43
 pf:TetR_C_44
 pf:TetR_C_5QacR-like protein, C-terminal region
 pf:TetR_C_5-like
 pf:TetR_C_6Bacterial transcriptional repressor
 pf:TetR_C_7AefR-like transcriptional repressor, C-terminal region
 pf:TetR_C_8Transcriptional regulator C-terminal region
 pf:TetR_NBacterial regulatory proteins, tetR family
 pf:TnsDTn7-like transposition protein D
 pf:Tobravirus_2B
 pf:UBN_ABUbinuclein conserved middle domain
 pf:UPF0122Putative helix-turn-helix protein, YlxM / p13 like
 pf:VPS13_VAB
 pf:Vps39_1Vacuolar sorting protein 39 domain 1
 pf:YCF90Uncharacterised protein family
 pf:YfbR-like

acop:RI196_16525 pf:DUF6262 pf:TetR_N pf:TetR_C_4 pf:TetR_C_5 pf:Sld3_N pf:TetR_C_17 pf:TetR_C_24 pf:TetR_C_29 pf:TetR_C_36 pf:TetR_C_2

ahb:bsdtb5_24530 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_24 pf:TetR_C_4

amt:Amet_3505 pf:Rep3_N pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_4

aoe:Clos_2691 pf:TetR_N pf:HTH_Tnp_1_2 pf:Clathrin_lg_ch pf:TetR_C_24 pf:TetR_C_17 pf:TetR_C_2 pf:TetR_C_4

apak:AP3564_01055 pf:DUF6262 pf:TetR_N pf:TetR_C_4 pf:TetR_C_5 pf:Sld3_N pf:TetR_C_17 pf:TetR_C_24 pf:TetR_C_29 pf:TetR_C_36 pf:TetR_C_2

awo:Awo_c31520 pf:TetR_N pf:HTH_Tnp_1_2 pf:Sigma70_r4_2 pf:Beach

bag:Bcoa_0726 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_17 pf:TetR_C_6 pf:TetR_C_4

bal:BACI_c08830 pf:HAD_2 pf:TetR_N pf:HTH_Tnp_1_2 pf:DUF6262 pf:HTH_7 pf:TetR_C_2 pf:TetR_C_17 pf:Sigma70_r2

bca:BCE_3253 pf:HTH_Tnp_1_2 pf:TetR_N pf:DUF6262 pf:HTH_AraC pf:HTH_7 pf:DUF5783 pf:Med27 pf:TetR_C_17 pf:TetR_C_2

bcer:BCK_18945 pf:RICTOR_M pf:HTH_Tnp_1_2 pf:TetR_N pf:DUF6262 pf:HTH_AraC pf:HTH_7 pf:Med27 pf:TetR_C_17 pf:TetR_C_2

bcr:BCAH187_A1007 pf:TetR_N pf:HTH_Tnp_1_2 pf:DUF6262 pf:HTH_7 pf:TetR_C_2 pf:TetR_C_17 pf:Sigma70_r2

bcx:BCA_3207 pf:HTH_Tnp_1_2 pf:TetR_N pf:DUF6262 pf:HTH_AraC pf:HTH_7 pf:TetR_C_2 pf:TetR_C_17

bcy:Bcer98_3666 pf:DUF6262 pf:HTH_Tnp_1_2 pf:TetR_N pf:HTH_7 pf:GAIN pf:TetR_C_17 pf:TetR_C_2

bcz:BCE33L0736 pf:HAD_2 pf:TetR_N pf:HTH_Tnp_1_2 pf:DUF6262 pf:HTH_7 pf:GAIN pf:TetR_C_17 pf:TetR_C_2 pf:Sigma70_r2

bhc:JFL75_10435 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_Tnp_1 pf:TetR_C_24 pf:TetR_C_6 pf:TetR_C_4 pf:TetR_C_2

bhy:BHWA1_02485 pf:TetR_N

bip:Bint_0711 pf:TetR_N

blr:BRLA_c006770 pf:HTH_Tnp_1_2 pf:TetR_N pf:Put_DNA-bind_N pf:SidF pf:Gal-bind_lectin pf:TetR_C_17

bnc:BCN_0827 pf:TetR_N pf:HTH_Tnp_1_2 pf:DUF6262 pf:HTH_7 pf:TetR_C_2 pf:TetR_C_17 pf:Sigma70_r2

bpf:BpOF4_13410 pf:TetR_N pf:TetR_C_24 pf:TetR_C_8 pf:TetR_C_4 pf:TetR_C_43 pf:TetR_C_2

brum:NDK47_23580 pf:DUF6262 pf:TetR_N pf:DUF4167 pf:TetR_C_24 pf:TetR_C_27 pf:TetR_C_17 pf:TetR_C_29 pf:TetR_C_5 pf:TetR_C_36 pf:TetR_C_4 pf:TetR_C_2

brw:GOP56_19305 pf:HTH_Tnp_1_2 pf:TetR_N pf:Put_DNA-bind_N pf:SidF pf:Gal-bind_lectin pf:TetR_C_17

btf:YBT020_15670 pf:DUF6262 pf:HTH_Tnp_1_2 pf:TetR_N pf:HTH_7 pf:GAIN pf:TetR_C_17 pf:TetR_C_2

cac:CA_C2605 pf:PI4K_N pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_AraC pf:TetR_C_4

cace:CACET_c24910 pf:HAD_2 pf:TetR_N pf:HTH_Tnp_1_2 pf:Phasin_2 pf:TetR_C_17 pf:TetR_C_24 pf:TetR_C_21 pf:TetR_C_2 pf:TetR_C_4

cae:SMB_G2640 pf:PI4K_N pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_AraC pf:TetR_C_4

casp:NQ535_08035 pf:TetR_N pf:DUF6262 pf:FumaraseC_C pf:TetR_C_4

cay:CEA_G2614 pf:Suv3_N pf:PI4K_N pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_AraC pf:TetR_C_4

cbar:PATL70BA_2472 pf:TetR_N pf:TetR_C_29 pf:TetR_C_27 pf:TetR_C_5 pf:TetR_C_5-like pf:TetR_C_24 pf:TetR_C_17 pf:TetR_C_4 pf:TetR_C_2

cbk:CLL_A1977 pf:Glyco_hydr_30_2 pf:HAD_2 pf:TetR_N pf:Clathrin_lg_ch pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_4

cbn:CbC4_1716 pf:TetR_N pf:HTH_Tnp_1_2 pf:DUF6262 pf:HTH_7 pf:Tenui_NCP pf:Vps39_1 pf:TetR_C_4 pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_17 pf:TetR_C_37 pf:TetR_C_6

cbut:ATN24_14575 pf:TetR_N pf:DUF5098 pf:TetR_C_4 pf:TetR_C_24

cck:Ccar_03855 pf:DUF6262 pf:TetR_N pf:HTH_17

ceu:A7L45_04780 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_AraC pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_4

cfm:BJL90_19060 pf:TetR_C_42 pf:TetR_N pf:Phasin_2 pf:TetR_C_24 pf:TetR_C_17 pf:TetR_C_13 pf:TetR_C_21 pf:TetR_C_37 pf:TetR_C_2 pf:TetR_C_25 pf:TetR_C_27 pf:TetR_C_4

cgas:J1C67_08160 pf:TetR_N

chyl:CE91St63_00930 pf:TetR_N pf:TetR_C_24 pf:TetR_C_43 pf:TetR_C_11 pf:TetR_C_17 pf:TetR_C_4 pf:TetR_C_21

ciu:G4D55_07080 pf:TetR_N

cld:CLSPO_c06220 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:COMMD1_N pf:DUF445 pf:UBN_AB pf:TetR_C_17 pf:TetR_C_2

cno:NT01CX_0025 pf:HAD_2 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_29 pf:HTH_7 pf:COG3_C pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_17 pf:TetR_C_4

csci:HDCHBGLK_00170 pf:TetR_N pf:TetR_C_4 pf:TetR_C_24

csh:Closa_1486 pf:Suv3_N pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_24 pf:HTH_AraC pf:IF2_N pf:TetR_C_4 pf:YfbR-like pf:TetR_C_2

dal:Dalk_0727 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_2

dda:Dd703_1769 pf:DUF6262 pf:TetR_N pf:HTH_AraC pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_4

dov:DSCO28_54030 pf:FtsH_ext pf:DUF6262 pf:HTH_Tnp_1_2 pf:TetR_N pf:HTH_23 pf:HTH_7 pf:TetR_C_24 pf:TetR_C_6 pf:TetR_C_4 pf:TetR_C_2

dzc:W909_10975 pf:TetR_N pf:DUF6262 pf:PCI pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_17 pf:TetR_C_10 pf:TetR_C_4

eha:Ethha_0169 pf:TetR_N pf:TetR_C_4 pf:TetR_C_2

ehn:H9Q80_05850 pf:TetR_N pf:TetR_C_2

erb:A4V01_08230 pf:TetR_N

etm:CE91St48_19700 pf:DUF6262 pf:TetR_N pf:TetR_C_5-like pf:TetR_C_2 pf:TetR_C_4 pf:TetR_C_24 pf:TetR_C_6 pf:TetR_C_17

fit:Fi14EGH31_03890 pf:TetR_N pf:Phage_terminase pf:HTH_Tnp_1_2

fpla:A4U99_03540 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_13

hpk:Hprae_2046 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:HTH_Tnp_1 pf:HTH_7 pf:TetR_C_2

lagr:FJQ98_04935 pf:HTH_Tnp_1_2 pf:TetR_N pf:DUF6262 pf:TetR_C_4 pf:TetR_C_43 pf:TetR_C_17 pf:TetR_C_2

lcap:ICJ70_20415 pf:HTH_Tnp_1_2 pf:HTH_6 pf:HTH_36 pf:HAD_2 pf:TetR_N pf:DUF6262 pf:TetR_C_4 pf:TetR_C_43 pf:TetR_C_17 pf:TetR_C_29 pf:TetR_C_5 pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_36 pf:TetR_C_27 pf:TetR_C_44

lfu:HR49_19660 pf:HTH_Tnp_1_2 pf:TetR_N pf:DUF6262 pf:TetR_C_4 pf:Lin1244_N pf:TetR_C_7 pf:TetR_C_43 pf:TetR_C_17 pf:TetR_C_36 pf:TetR_C_2 pf:TetR_C_44

lgy:T479_03930 pf:HTH_Tnp_1_2 pf:DUF6262 pf:TetR_N pf:TetR_C_4 pf:TetR_C_17 pf:TetR_C_24 pf:TetR_C_5 pf:TetR_C_2

liu:OU989_03595 pf:HTH_Tnp_1_2 pf:TetR_N pf:DUF6262 pf:TetR_C_4 pf:TetR_C_43 pf:TetR_C_17 pf:TetR_C_29 pf:TetR_C_24 pf:TetR_C_5 pf:TetR_C_36 pf:TetR_C_2 pf:TetR_C_44

lmac:I6G82_14470 pf:HTH_Tnp_1_2 pf:TetR_N pf:TetR_C_17 pf:TetR_C_24 pf:TetR_C_29 pf:TetR_C_5 pf:TetR_C_4 pf:TetR_C_2 pf:TetR_C_27 pf:TetR_C_44

lpak:GDS87_04130 pf:HTH_6 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_4 pf:TetR_C_11 pf:TetR_C_43 pf:TetR_C_17 pf:TetR_C_29 pf:TetR_C_24 pf:TetR_C_36 pf:TetR_C_27 pf:TetR_C_2 pf:SLH

lsp:Bsph_1306 pf:HTH_Tnp_1_2 pf:TetR_N pf:DUF6262 pf:TetR_C_4 pf:Lin1244_N pf:TetR_C_43 pf:TetR_C_17 pf:TetR_C_2 pf:TetR_C_44

lyc:FH508_0004305 pf:HTH_36 pf:BAH pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_4 pf:TetR_C_17 pf:TetR_C_2

lyg:C1N55_06640 pf:TetR_N pf:DUF5433 pf:TetR_C_2

lys:LBYS11_03835 pf:HTH_6 pf:HTH_Tnp_1_2 pf:TetR_N pf:DUF6262 pf:HTH_36 pf:TetR_C_4 pf:TetR_C_43 pf:TetR_C_17 pf:TetR_C_24 pf:TetR_C_29 pf:TetR_C_5 pf:TetR_C_36 pf:TetR_C_2 pf:TetR_C_44

mdg:K8L98_07820 pf:TetR_N pf:TetR_C_24 pf:TetR_C_17 pf:TetR_C_43 pf:TetR_C_29 pf:TetR_C_21 pf:TetR_C_2 pf:TetR_C_4

mdv:C5Q96_03650 pf:ERM_C pf:TetR_N pf:TetR_C_24 pf:TetR_C_4

mfor:NQ534_12250 pf:TetR_N pf:TetR_C_4 pf:TetR_C_43 pf:TetR_C_24 pf:TetR_C_29 pf:TetR_C_11

mnl:QU661_05200 pf:ERM_C pf:HrcA pf:TetR_N pf:TetR_C_27 pf:TetR_C_24 pf:TetR_C_4

nth:Nther_2575 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_24 pf:TetR_C_29 pf:TetR_C_4 pf:TetR_C_17 pf:TetR_C_2

ocs:OF820_11800 pf:HTH_Tnp_1_2 pf:TetR_N pf:TetR_C_17 pf:TetR_C_2

oon:NP440_02325 pf:TetR_N pf:HTH_Tnp_1_2 pf:Tobravirus_2B pf:FadA pf:TetR_C_4 pf:TetR_C_17 pf:TetR_C_2

ova:OBV_26020 pf:TetR_N pf:HNOB pf:DUF6262 pf:TetR_C_17 pf:TetR_C_5 pf:YCF90 pf:TetR_C_4 pf:TetR_C_11

pasa:BAOM_3314 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_4 pf:TetR_C_29 pf:TetR_C_6 pf:TetR_C_17

pbif:KXZ80_01985 pf:TetR_N

pbut:DTO10_01110 pf:TetR_N pf:TetR_C_24 pf:TetR_C_43 pf:TetR_C_29 pf:TetR_C_4 pf:TetR_C_36 pf:TetR_C_17 pf:TetR_C_2

pft:JBW_00292 pf:TetR_N pf:HTH_Tnp_1_2 pf:SapB_1 pf:TetR_C_24 pf:TetR_C_4

pgm:PGRAT_12395 pf:DUF6262 pf:TetR_N pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_4

pln:Plano_2316 pf:TetR_N pf:REGB_T4 pf:TetR_C_4 pf:TetR_C_24 pf:TetR_C_17 pf:TetR_C_2

plx:CW734_05540 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_4 pf:TetR_C_24 pf:TetR_C_36 pf:TetR_C_2

ppeo:ABE82_03490 pf:DUF6262 pf:TetR_N pf:HTH_AraC pf:TetR_C_24 pf:TetR_C_2 pf:TetR_C_4 pf:TetR_C_11

proq:P6M73_15770 pf:HTH_Tnp_1_2 pf:TetR_N

prt:AUC31_05935 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_24 pf:TetR_C_11 pf:TetR_C_4 pf:TetR_C_43 pf:TetR_C_36 pf:TetR_C_2

psor:RSJ16_09195 pf:TetR_N pf:DUF6120 pf:TetR_C_2

rpay:P0092_17600 pf:DUF3867 pf:DUF5677 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_4

sass:MUG09_02690 pf:TetR_N pf:TetR_C_6 pf:TetR_C_4 pf:TetR_C_27

sgy:Sgly_1130 pf:TetR_N pf:Sigma70_r4_2 pf:HTH_AraC pf:HTH_7 pf:TetR_C_5 pf:TetR_C_17 pf:TetR_C_24 pf:TetR_C_29 pf:TetR_C_27 pf:TetR_C_4

spae:E2C16_10660 pf:TetR_N pf:TetR_C_27 pf:TetR_C_17 pf:TetR_C_24 pf:TetR_C_8 pf:TetR_C_36 pf:TetR_C_4

sure:SporoP32a_12650 pf:TetR_N pf:TetR_C_24 pf:TetR_C_17 pf:TetR_C_29 pf:TetR_C_4

teb:T8CH_1644 pf:HTH_Tnp_1_2 pf:TetR_N pf:STAS pf:TetR_C_2

tem:JW646_00225 pf:VPS13_VAB pf:TetR_N pf:TetR_C_2

tgc:L0P85_08125 pf:VPS13_VAB pf:TetR_N pf:TetR_C_2

thyr:P4S50_07260 pf:HTH_Tnp_1_2 pf:DUF6262 pf:TetR_N pf:TnsD pf:HTH_7 pf:TetR_C_4 pf:TetR_C_2

tmy:TEMA_13930 pf:VPS13_VAB pf:TetR_N pf:TetR_C_36 pf:TetR_C_2

tsh:Tsac_0255 pf:TetR_N pf:TetR_C_4

ttm:Tthe_2454 pf:Sigma70_r4 pf:TetR_N pf:GPAT_N pf:TetR_C_2 pf:TetR_C_4

tto:Thethe_02519 pf:Sigma70_r4 pf:TetR_N pf:TetR_C_2 pf:TetR_C_4

txy:Thexy_2130 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_2 pf:TetR_C_4

vgu:HYG85_05860 pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_2

vij:JNUCC6_00745 pf:FadA pf:DUF6262 pf:TetR_N pf:HTH_Tnp_1_2 pf:TetR_C_2 pf:TetR_C_4 pf:TetR_C_36

vik:KFZ58_14440 pf:TetR_N pf:UPF0122 pf:HTH_Tnp_1_2 pf:HTH_AraC pf:Tobravirus_2B pf:FadA pf:DUF2528 pf:TetR_C_17 pf:TetR_C_4 pf:TetR_C_2

vnt:OLD84_15720 pf:TetR_N pf:HTH_Tnp_1_2 pf:UPF0122 pf:Tobravirus_2B pf:FadA pf:TetR_C_4 pf:TetR_C_27 pf:TetR_C_17 pf:TetR_C_2