Search common motifs in selected sequences


  
Motifs : pf:4HB_MCP_1Four helix bundle sensory module for signal transduction
 pf:7TMR-DISMED27TMR-DISM extracellular 2
 pf:7TMR-DISM_7TM7TM diverse intracellular signalling
 pf:ACT_7ACT domain
 pf:Acetyltransf_9Acetyltransferase (GNAT) domain
 pf:AmnionlessAmnionless
 pf:Autoind_bindAutoinducer binding domain
 pf:CHASECHASE domain
 pf:CMDCarboxymuconolactone decarboxylase family
 pf:Cache_3-Cache_2Cache 3/Cache 2 fusion domain
 pf:DUF1525Protein of unknown function (DUF1525)
 pf:DUF2682Protein of unknown function (DUF2682)
 pf:DUF3176Protein of unknown function (DUF3176)
 pf:DUF3949Protein of unknown function (DUF3949)
 pf:DUF5008Domain of unknown function (DUF5008)
 pf:DUF969Protein of unknown function (DUF969)
 pf:EALEAL domain
 pf:FAM25FAM25 family
 pf:GAFGAF domain
 pf:GAF_2GAF domain
 pf:GAF_3GAF domain
 pf:GGDEFDiguanylate cyclase, GGDEF domain
 pf:GGDEF_2
 pf:HAMPHAMP domain
 pf:HD_5HD domain
 pf:LexA_DNA_bindLexA DNA binding domain
 pf:MASE1MASE1
 pf:Nre_CArchaeal Nre, C-terminal
 pf:Nucleos_tra2_NNa+ dependent nucleoside transporter N-terminus
 pf:PASPAS fold
 pf:PAS_10PAS domain
 pf:PAS_11PAS domain
 pf:PAS_3PAS fold
 pf:PAS_4PAS fold
 pf:PAS_7PAS fold
 pf:PAS_8PAS domain
 pf:PAS_9PAS domain
 pf:PdtaS_GAF
 pf:Phage_mat-APhage maturation protein
 pf:Phage_sheath_1Phage tail sheath protein
 pf:PhnGPhosphonate metabolism protein PhnG
 pf:RPA_interact_NReplication protein A interacting N-terminal
 pf:Robl_LC7Roadblock/LC7 domain
 pf:TIR_2TIR domain
 pf:dCache_1Cache domain
 pf:sCache_3_3Single cache domain 3

acyc:JI721_04995 pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:Autoind_bind pf:GGDEF pf:EAL pf:Nre_C

ara:Arad_7075 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_10 pf:GGDEF pf:EAL

bge:BC1002_0386 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_8 pf:PAS_9 pf:PAS pf:PAS_4 pf:PAS_3 pf:GGDEF pf:EAL

bui:AX768_19540 pf:dCache_1 pf:DUF3176 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

bum:AXG89_24945 pf:4HB_MCP_1 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GGDEF pf:DUF5008 pf:EAL

caba:SBC2_80180 pf:dCache_1 pf:PAS_4 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

cari:FNU76_10335 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_7 pf:PAS_10 pf:PAS_3 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:GAF_2 pf:GGDEF pf:EAL

cks:H9L41_22580 pf:PAS pf:PAS_8 pf:PAS_7 pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF pf:GGDEF_2 pf:EAL

devo:H4N61_15500 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

dom:RRU94_15965 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

ead:OV14_1937 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_10 pf:PAS_3 pf:sCache_3_3 pf:Cache_3-Cache_2 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

eah:FA04_03325 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_10 pf:PAS_3 pf:sCache_3_3 pf:Cache_3-Cache_2 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

ecaa:J3R84_03200 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_10 pf:PAS_3 pf:sCache_3_3 pf:Cache_3-Cache_2 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

emx:FKV68_05240 pf:PAS pf:PAS_4 pf:HD_5 pf:PAS_9 pf:PAS_10 pf:PAS_3 pf:sCache_3_3 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

enp:JVX98_17320 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_10 pf:PAS_3 pf:sCache_3_3 pf:Cache_3-Cache_2 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

esj:SJ05684_c05830 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:EAL

fam:OYT1_ch0821 pf:7TMR-DISMED2 pf:7TMR-DISM_7TM pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:EAL

hdi:HDIA_0432 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF_2 pf:GAF pf:Autoind_bind pf:DUF969 pf:GGDEF pf:GGDEF_2 pf:EAL

jaj:EKL02_15295 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_8 pf:PAS pf:PAS_9 pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF pf:EAL

labp:FJ695_19320 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF pf:GAF_2 pf:Autoind_bind pf:GGDEF pf:EAL

labr:CHH27_04315 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

labt:FIU93_22115 pf:PAS pf:PAS_4 pf:PAS_9 pf:Phage_sheath_1 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

lagg:B0E33_27890 pf:PAS pf:PAS_4 pf:PAS_9 pf:Phage_sheath_1 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

lal:AT746_00120 pf:GAF_2 pf:GAF pf:Autoind_bind pf:GGDEF pf:FAM25 pf:EAL

lap:ACP90_16055 pf:PAS pf:PAS_4 pf:PAS_9 pf:Phage_sheath_1 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

mamo:A6B35_16115 pf:PAS pf:PAS_8 pf:PAS_7 pf:PAS_4 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:EAL

mjo:FOF60_03370 pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

mmai:sS8_1233 pf:GAF pf:GAF_2 pf:GAF_2 pf:GAF_3 pf:GAF pf:Autoind_bind pf:GGDEF pf:GGDEF_2 pf:EAL

mmot:QZJ86_14470 pf:GAF_2 pf:GAF pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

mop:Mesop_2925 pf:PAS_8 pf:PAS_7 pf:PAS_4 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:EAL

msut:LC048_18720 pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:Autoind_bind pf:GGDEF pf:GGDEF_2 pf:EAL

msze:MSZNOR_0415 pf:RPA_interact_N pf:GAF pf:GAF_2 pf:GAF_2 pf:GAF pf:Autoind_bind pf:GGDEF pf:GGDEF_2 pf:EAL

nok:FAY22_01450 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_7 pf:PAS_9 pf:PAS_10 pf:PAS_3 pf:Cache_3-Cache_2 pf:GAF pf:GAF_2 pf:GAF_3 pf:Autoind_bind pf:GGDEF pf:EAL

palv:KSS97_17035 pf:4HB_MCP_1 pf:Amnionless pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF pf:EAL

pba:PSEBR_a2263 pf:4HB_MCP_1 pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

pbc:CD58_17700 pf:4HB_MCP_1 pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF pf:EAL

pbz:GN234_00290 pf:4HB_MCP_1 pf:DUF2682 pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

pcas:LOY40_16300 pf:4HB_MCP_1 pf:Amnionless pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF pf:EAL

pcuc:PSH97_13850 pf:4HB_MCP_1 pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF pf:EAL

pfe:PSF113_3576 pf:4HB_MCP_1 pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF pf:EAL

pfk:PFAS1_27510 pf:4HB_MCP_1 pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF pf:EAL

pht:BLM14_25985 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

pmar:B0X71_18165 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

pnb:NK667_07140 pf:4HB_MCP_1 pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:EAL

pphr:APZ00_21445 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GAF_3 pf:GGDEF pf:EAL

pts:CUJ90_02185 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_8 pf:PAS pf:PAS_9 pf:PAS_4 pf:PAS_3 pf:GGDEF pf:EAL

pvk:EPZ47_17735 pf:4HB_MCP_1 pf:HAMP pf:GAF_2 pf:GAF_3 pf:GAF pf:GGDEF pf:EAL

pza:HU749_013055 pf:4HB_MCP_1 pf:Nucleos_tra2_N pf:HAMP pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

rad:CO657_04280 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

raw:NE851_16015 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rban:J2J98_05720 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

rbq:J2J99_06080 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rbw:RLCC275e_04665 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rct:PYR68_04095 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rec:RHECIAT_CH0001244 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rei:IE4771_CH01227 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

rel:REMIM1_CH01163 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

rep:IE4803_CH01185 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

ret:RHE_CH01159 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

rez:AMJ99_CH01276 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

rhid:FFM81_015200 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rhk:Kim5_CH01297 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rhn:AMJ98_CH01197 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

rhr:CKA34_20075 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_10 pf:GGDEF pf:PhnG pf:EAL pf:Phage_mat-A

rhx:AMK02_CH01202 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

rif:U5G49_000918 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rii:FFM53_006750 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rjg:CCGE525_06200 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL pf:CMD

rlb:RLEG3_14990 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rle:RL1290 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rlg:Rleg_0909 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rln:J0663_14515 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_3 pf:GAF_2 pf:GGDEF pf:EAL

rls:HB780_03255 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_10 pf:GGDEF pf:EAL

rlt:Rleg2_0796 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rlu:RLEG12_15335 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rlw:RlegWSM1455_04660 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rpha:AMC79_CH01201 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rpop:K1718_16885 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF_2 pf:GAF pf:Autoind_bind pf:GGDEF pf:EAL pf:ACT_7

rrg:J3P73_07250 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

rtr:RTCIAT899_PC05340 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_10 pf:GGDEF pf:EAL

saca:FFV09_16725 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_11 pf:PAS_3 pf:PdtaS_GAF pf:GAF pf:GAF_2 pf:GAF pf:Autoind_bind pf:GGDEF pf:EAL pf:LexA_DNA_bind

saga:M5M_15815 pf:CHASE pf:PAS pf:PAS_8 pf:PAS_9 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:PAS_11 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

shz:shn_05030 pf:PAS_4 pf:PAS_9 pf:PAS pf:PAS_3 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

six:BSY16_1961 pf:Robl_LC7 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL pf:TIR_2

skm:PZL22_004576 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF3949 pf:EAL

smd:Smed_0574 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF pf:GAF_2 pf:GGDEF pf:EAL

sme:SMc00038 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF3949 pf:EAL

smeg:C770_GR4Chr0962 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF3949 pf:EAL

smel:SM2011_c00038 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF3949 pf:EAL

smer:DU99_04955 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF3949 pf:EAL

smi:BN406_00616 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF3949 pf:EAL

smk:Sinme_0669 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF3949 pf:EAL

smq:SinmeB_0573 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF3949 pf:EAL

smx:SM11_chr0618 pf:PAS pf:PAS_4 pf:PAS_9 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF3949 pf:EAL

soj:K6301_03350 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GGDEF pf:Acetyltransf_9 pf:EAL

ssum:Q9314_05960 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:GAF_2 pf:GAF pf:GGDEF pf:Acetyltransf_9 pf:EAL

steg:QA637_02960 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_10 pf:PAS_3 pf:sCache_3_3 pf:Cache_3-Cache_2 pf:GAF pf:GAF_2 pf:GGDEF pf:PhnG pf:EAL

szo:K8M09_04150 pf:PAS pf:PAS_4 pf:PAS_3 pf:PAS_9 pf:GAF_2 pf:GAF pf:GGDEF pf:Acetyltransf_9 pf:EAL

tcar:U0034_02070 pf:dCache_1 pf:PAS_4 pf:PAS pf:GAF_3 pf:GAF pf:GAF_2 pf:GGDEF pf:DUF1525 pf:EAL

thic:TspCOW1_02900 pf:MASE1 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL

ttc:FOKN1_2371 pf:MASE1 pf:GAF_2 pf:GAF pf:GGDEF pf:EAL