Search common motifs in selected sequences


  
Motifs : pf:AAA_18AAA domain
 pf:ANTPhage antirepressor protein KilAC domain
 pf:BAR_3BAR domain of APPL family
 pf:B_solenoid_ydck
 pf:CHD5CHD5-like protein
 pf:CPxCG_zf
 pf:Cas_CXXC_CXXCCRISPR-associated protein (Cas_CXXC_CXXC)
 pf:ColG_sub
 pf:CpXCCpXC protein
 pf:DDE_Tnp_IS1595ISXO2-like transposase domain
 pf:DDE_Tnp_IS240DDE domain
 pf:DDE_Tnp_IS66Transposase IS66 family
 pf:DUF2387Probable metal-binding protein (DUF2387)
 pf:DUF35_NRubredoxin-like zinc ribbon domain (DUF35_N)
 pf:DUF4503Domain of unknown function (DUF4503)
 pf:DUF5065Domain of unknown function (DUF5065)
 pf:DUF643Protein of unknown function (DUF643)
 pf:DUF6577
 pf:DUF6729
 pf:DUF835Protein of unknown function (DUF835)
 pf:DZR_2
 pf:DpnIDam-replacing family
 pf:Elf1Transcription elongation factor Elf1 like
 pf:FYDLN_acidProtein of unknown function (FYDLN_acid)
 pf:FcoTFcoT-like thioesterase domain
 pf:Fe_dep_repressIron dependent repressor, N-terminal DNA binding domain
 pf:GA-like
 pf:GCR1_CTranscriptional activator of glycolytic enzymes
 pf:GlucosaminidaseMannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
 pf:HTH_1Bacterial regulatory helix-turn-helix protein, lysR family
 pf:HTH_10HTH DNA binding domain
 pf:HTH_11HTH domain
 pf:HTH_13HTH DNA binding domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_Tnp_4Helix-turn-helix of DDE superfamily endonuclease
 pf:HTH_microHTH-like
 pf:HVO_2753_ZBP
 pf:HemagglutininHaemagglutinin
 pf:Herpes_UL92UL92 family
 pf:HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA
 pf:IPI_T4Nuclease inhibitor from bacteriophage T4
 pf:Jiv90Cleavage inducing molecular chaperone
 pf:KTI12Chromatin associated protein KTI12
 pf:Lar_restr_allevRestriction alleviation protein Lar
 pf:MRP-L27Mitochondrial ribosomal protein L27
 pf:OrfB_Zn_ribbonPutative transposase DNA-binding domain
 pf:PADR1_Zn_ribbon
 pf:PHD_4PHD-finger
 pf:Peptidase_M1Peptidase family M1
 pf:Protamine_3
 pf:RH_dom
 pf:Ribosomal_L37aeRibosomal L37ae protein family
 pf:Ribosomal_S2Ribosomal protein S2
 pf:SelB-wing_2Elongation factor SelB, winged helix
 pf:TF_Zn_RibbonTFIIB zinc-binding
 pf:Tmemb_55ATransmembrane protein 55A
 pf:UDPG_MGDP_dh_CUDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
 pf:YdaS_toxin
 pf:YhfHYhfH-like protein
 pf:Yippee-Mis18Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
 pf:YjdM_Zn_Ribbon
 pf:Zn-ribbon_8Zinc ribbon domain
 pf:Zn_Tnp_IS1InsA N-terminal domain
 pf:Zn_Tnp_IS1595Transposase zinc-ribbon domain
 pf:Zn_Tnp_IS91Transposase zinc-binding domain
 pf:Zn_ribbon_SprT
 pf:Zn_ribbon_recomRecombinase zinc beta ribbon domain
 pf:rve_2Integrase core domain
 pf:rve_3Integrase core domain
 pf:sCache_3_2Single cache domain 3
 pf:zf-AN1AN1-like Zinc finger
 pf:zf-BEDBED zinc finger
 pf:zf-CCCH_6
 pf:zf-CHC2CHC2 zinc finger
 pf:zf-DofDof domain, zinc finger
 pf:zf-H2C2_2Zinc-finger double domain
 pf:zf-MYST
 pf:zf-Paramyx-PZinc-binding domain of Paramyxoviridae V protein
 pf:zf-RRN7Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
 pf:zf-ribbon_3zinc-ribbon domain
 pf:zf-tcixPutative treble-clef, zinc-finger, Zn-binding
 pf:zinc-ribbons_6zinc-ribbons
 pf:zinc_ribbon_4zinc-ribbon domain
 pf:zinc_ribbon_5zinc-ribbon domain
 pf:zinc_ribbon_6Zinc-ribbon

adin:H7849_16410 pf:Zn_Tnp_IS1595 pf:Zn_Tnp_IS1 pf:zf-H2C2_2 pf:HTH_11 pf:HTH_micro pf:DDE_Tnp_IS1595

aht:ANTHELSMS3_01675 pf:Zn_Tnp_IS1595 pf:zf-AN1 pf:HTH_11 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

ait:AI2BBH_22800 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3 pf:rve_2

amak:J5W79_12920 pf:Zn_Tnp_IS1595 pf:zinc_ribbon_5 pf:Jiv90 pf:zf-ribbon_3 pf:Lar_restr_allev pf:HVO_2753_ZBP pf:Zn_ribbon_SprT pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:DUF6577 pf:rve_3

amu:Amuc_1665 pf:Zn_Tnp_IS1595 pf:DUF2387 pf:Elf1 pf:Ribosomal_L37ae pf:PHD_4 pf:Lar_restr_allev pf:CPxCG_zf pf:Zn_ribbon_recom pf:HTH_10 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

ark:D6B99_12040 pf:HTH_11 pf:HTH_10 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3

bcel:BcellWH2_02172 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DUF5065

bdo:EL88_10865 pf:Zn_Tnp_IS1595 pf:HTH_1 pf:HTH_13 pf:DDE_Tnp_IS1595 pf:DUF835 pf:rve_2

bfc:BacF7301_01455 pf:Zn_Tnp_IS1595 pf:FcoT pf:DDE_Tnp_IS1595

bfg:BF638R_1939 pf:Zn_Tnp_IS1595 pf:HTH_11 pf:Fe_dep_repress pf:DDE_Tnp_IS1595

bis:DXK01_012250 pf:Zn_Tnp_IS1595 pf:HTH_11 pf:HTH_23 pf:HTH_10 pf:YdaS_toxin pf:DDE_Tnp_IS1595

bsal:K6V25_12200 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:Protamine_3 pf:Herpes_UL92 pf:ColG_sub pf:rve_3

btho:Btheta7330_00742 pf:Zn_Tnp_IS1595 pf:zf-Paramyx-P pf:HTH_11 pf:DDE_Tnp_IS1595

buy:D8S85_17525 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3

bvs:BARVI_12190 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

carh:EGY05_07650 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

cbae:COR50_04850 pf:Zn_Tnp_IS1595 pf:DUF643 pf:DDE_Tnp_IS1595

cben:EG339_19735 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

cbp:EB354_16495 pf:Zn_Tnp_IS1595 pf:HTH_11 pf:DDE_Tnp_IS1595

ccab:PFY12_04600 pf:HTH_11 pf:HTH_10 pf:DDE_Tnp_IS1595

cgam:PFY09_01930 pf:Zn_Tnp_IS1595 pf:HTH_11 pf:DDE_Tnp_IS1595

cgn:OK18_08760 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

chh:A0O34_01515 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

chrs:EAG08_04165 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

chz:CHSO_3253 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

cna:AB433_09190 pf:OrfB_Zn_ribbon pf:Zn_Tnp_IS1595 pf:Zn_ribbon_SprT pf:Zn_Tnp_IS91 pf:Tmemb_55A pf:Lar_restr_allev pf:DDE_Tnp_IS1595

cora:N0B40_13760 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

csha:EG350_03200 pf:Zn_Tnp_IS1595 pf:zf-Dof pf:Elf1 pf:Zn_ribbon_SprT pf:DDE_Tnp_IS1595

dcn:MUK70_10920 pf:Zn_Tnp_IS1595 pf:zf-ribbon_3 pf:OrfB_Zn_ribbon pf:zf-tcix pf:PADR1_Zn_ribbon pf:DDE_Tnp_IS1595

deth:HX448_10110 pf:DpnI pf:Zn_Tnp_IS1595 pf:DZR_2 pf:DDE_Tnp_IS1595 pf:Yippee-Mis18 pf:DDE_Tnp_IS240

dun:FDZ78_10935 pf:Zn_Tnp_IS1595 pf:OrfB_Zn_ribbon pf:HTH_10 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

ecul:PVA46_08265 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:MRP-L27 pf:DDE_Tnp_IS66

een:BBD30_11620 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

ery:CP97_10180 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DUF35_N pf:Elf1 pf:Lar_restr_allev pf:zinc_ribbon_6 pf:HTH_11 pf:DDE_Tnp_IS1595

fak:FUA48_12315 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:ColG_sub

fay:Q4Q34_09000 pf:Zn_Tnp_IS1595 pf:zf-CCCH_6 pf:zinc-ribbons_6 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

fcs:TRV642_3994 pf:Zn_Tnp_IS1595 pf:DZR_2 pf:Zn-ribbon_8 pf:YjdM_Zn_Ribbon pf:Zn_ribbon_SprT pf:Elf1 pf:Lar_restr_allev pf:Hemagglutinin pf:DDE_Tnp_IS1595

fei:K9M53_00105 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

fen:J0383_18815 pf:GCR1_C pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

fgg:FSB75_13560 pf:Zn_Tnp_IS1595 pf:HTH_11 pf:HTH_10 pf:DDE_Tnp_IS1595 pf:KTI12 pf:DDE_Tnp_IS240

fjo:Fjoh_0919 pf:Zn_Tnp_IS1595 pf:HypA pf:CpXC pf:DDE_Tnp_IS1595

flb:LV704_06850 pf:OrfB_Zn_ribbon pf:Zn_Tnp_IS1595 pf:zf-tcix pf:HTH_Tnp_4 pf:DDE_Tnp_IS1595

flo:K1I41_09265 pf:Zn_Tnp_IS1595 pf:DZR_2 pf:Zn-ribbon_8 pf:Zn_ribbon_SprT pf:Elf1 pf:CPxCG_zf pf:Zn-ribbon_8 pf:DDE_Tnp_IS1595 pf:IPI_T4

flp:LK994_13905 pf:Zn_Tnp_IS1595 pf:zf-tcix pf:DDE_Tnp_IS1595 pf:BAR_3

flu:CHH17_02205 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3 pf:rve_2

fpal:HYN49_13415 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

fte:Fluta_0682 pf:zf-CHC2 pf:Zn_Tnp_IS1595 pf:HTH_11 pf:DDE_Tnp_IS1595

grw:FTO74_01150 pf:HypA pf:Zn_Tnp_IS1595 pf:OrfB_Zn_ribbon pf:HTH_micro pf:HTH_1 pf:DDE_Tnp_IS1595

hdi:HDIA_3190 pf:Zn_Tnp_IS1595 pf:RH_dom pf:Tmemb_55A pf:Lar_restr_allev pf:HTH_11 pf:DDE_Tnp_IS1595

hdt:HYPDE_34493 pf:Zn_Tnp_IS1595 pf:ANT pf:DDE_Tnp_IS1595

hnv:DDQ68_12410 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

hws:RNZ46_16670 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3 pf:rve_2

hyz:AXW84_14565 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

iro:RT717_26635 pf:Zn_Tnp_IS1595 pf:YjdM_Zn_Ribbon pf:Zn_ribbon_SprT pf:OrfB_Zn_ribbon pf:DDE_Tnp_IS1595

kos:KORDIASMS9_03881 pf:Zn_Tnp_IS1595 pf:HypA pf:DUF4503 pf:CpXC pf:HTH_11 pf:DDE_Tnp_IS1595

lri:NCTC12151_02696 pf:Zn_Tnp_IS1595 pf:zinc_ribbon_4 pf:HTH_10 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

mama:GII36_00245 pf:Zn_Tnp_IS1595 pf:OrfB_Zn_ribbon pf:Elf1 pf:DDE_Tnp_IS1595

marb:CJ263_06200 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:CHD5 pf:DDE_Tnp_IS240 pf:B_solenoid_ydck pf:rve_3 pf:rve_2

mare:EJ994_11780 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3

marf:CJ739_1831 pf:Zn_Tnp_IS1595 pf:YjdM_Zn_Ribbon pf:zf-tcix pf:HTH_11 pf:DDE_Tnp_IS1595 pf:Peptidase_M1

mgin:FRZ54_22205 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3

mgos:DIU38_000825 pf:Zn_Tnp_IS1595 pf:zinc_ribbon_5 pf:OrfB_Zn_ribbon pf:DUF6729 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

mlt:VC82_2033 pf:OrfB_Zn_ribbon pf:Zn_Tnp_IS1595 pf:Zn_ribbon_SprT pf:zf-H2C2_2 pf:DDE_Tnp_IS1595

mpau:ZMTM_14140 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:OrfB_Zn_ribbon pf:Zn_Tnp_IS1 pf:Lar_restr_allev pf:DDE_Tnp_IS1595 pf:GA-like

mros:EHO51_19015 pf:Zn_Tnp_IS1595 pf:RH_dom pf:DpnI pf:TF_Zn_Ribbon pf:Zn_ribbon_SprT pf:DDE_Tnp_IS1595

msab:SNE25_18325 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

mup:A0256_11355 pf:Zn_Tnp_IS1595 pf:Lar_restr_allev pf:Cas_CXXC_CXXC pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3 pf:rve_2

mut:GVT53_18880 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3 pf:rve_2 pf:zf-MYST

nur:ATY38_14210 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:DpnI pf:YhfH pf:Lar_restr_allev pf:Zn_Tnp_IS91 pf:Tmemb_55A pf:OrfB_Zn_ribbon pf:Zn_ribbon_SprT pf:YjdM_Zn_Ribbon pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

palx:GQA70_12400 pf:Zn_Tnp_IS1595 pf:zf-AN1 pf:HTH_11 pf:DDE_Tnp_IS1595

paro:CUV01_06485 pf:Zn_Tnp_IS1595 pf:Jiv90 pf:Zn_ribbon_recom pf:zf-AN1 pf:HTH_11 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

pby:L6471_11225 pf:Zn_Tnp_IS1595 pf:zf-ribbon_3 pf:DDE_Tnp_IS1595

pclr:PC1C4_05750 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

pfai:NXY11_15685 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:rve_3

pgin:FRZ67_08055 pf:Zn_Tnp_IS1595 pf:Ribosomal_S2 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

pgol:K6V26_21365 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:rve_3

pjo:LK449_12345 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

rub:GBA63_02855 pf:Zn_Tnp_IS1595 pf:OrfB_Zn_ribbon pf:zf-BED pf:DDE_Tnp_IS1595 pf:AAA_18

rud:TH61_08570 pf:Zn_Tnp_IS1595 pf:HTH_11 pf:DDE_Tnp_IS1595 pf:UDPG_MGDP_dh_C pf:SelB-wing_2 pf:DDE_Tnp_IS240

rut:FIU92_15020 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:sCache_3_2

saal:L336_0833 pf:Zn_Tnp_IS1595 pf:zf-RRN7 pf:OrfB_Zn_ribbon pf:DDE_Tnp_IS1595

sabu:MBM09_00755 pf:Zn_Tnp_IS1595 pf:zf-tcix pf:HTH_Tnp_4 pf:DDE_Tnp_IS1595

sanc:SANR_0868 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

sans:DK43_03130 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

scf:Spaf_1697 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

scp:HMPREF0833_11130 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

sfla:SPHFLASMR4Y_00476 pf:Zn_Tnp_IS1595 pf:Zn-ribbon_8 pf:OrfB_Zn_ribbon pf:Zn_ribbon_SprT pf:Zn_Tnp_IS91 pf:Tmemb_55A pf:Lar_restr_allev pf:DDE_Tnp_IS1595

smie:NCTC11169_01300 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

smul:SMUL_1797 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3 pf:rve_2

spei:EHW89_08580 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

spho:C3E99_06805 pf:Zn_Tnp_IS1595 pf:RH_dom pf:Zn_ribbon_SprT pf:Tmemb_55A pf:DDE_Tnp_IS1595

sphq:BWQ93_12790 pf:Zn_Tnp_IS1595 pf:RH_dom pf:Zn_ribbon_SprT pf:Tmemb_55A pf:DDE_Tnp_IS1595

spph:KFK14_20050 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Lar_restr_allev pf:DDE_Tnp_IS1595

spsc:E2P86_08975 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

spse:SULPSESMR1_03112 pf:Zn_Tnp_IS1595 pf:Jiv90 pf:HTH_11 pf:DDE_Tnp_IS1595

ssua:FPZ54_02850 pf:Zn_Tnp_IS1595 pf:DpnI pf:RH_dom pf:Zn_ribbon_SprT pf:OrfB_Zn_ribbon pf:DDE_Tnp_IS1595

ssy:SLG_06430 pf:Zn_Tnp_IS1595 pf:DUF35_N pf:Zn-ribbon_8 pf:Lar_restr_allev pf:HTH_11 pf:DDE_Tnp_IS1595

surn:NCTC13766_02110 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595

sva:SVA_0448 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240

tje:TJEJU_2681 pf:Zn_Tnp_IS1595 pf:DDE_Tnp_IS1595 pf:DDE_Tnp_IS240 pf:rve_3 pf:rve_2

tsig:D6T69_00065 pf:Zn_Tnp_IS1595 pf:FYDLN_acid pf:CpXC pf:DDE_Tnp_IS1595 pf:Glucosaminidase