Search common motifs in selected sequences


  
Motifs : pf:ABC_sub_bind (1)ABC transporter substrate binding protein
 pf:Beta-lactamase2 (27)Beta-lactamase enzyme family
 pf:CbiJ (1)Precorrin-6x reductase CbiJ/CobK
 pf:DD_K (3)
 pf:DHDPS (1)Dihydrodipicolinate synthetase family
 pf:DUF6058 (1)
 pf:FXR_C3 (1)Fragile X-related 1 protein C-terminal region 3
 pf:Glycos_transf_N (1)3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
 pf:HTH_10 (17)HTH DNA binding domain
 pf:HTH_19 (1)Helix-turn-helix domain
 pf:HTH_24 (37)Winged helix-turn-helix DNA-binding
 pf:HTH_26 (4)Cro/C1-type HTH DNA-binding domain
 pf:HTH_3 (66)Helix-turn-helix
 pf:HTH_30 (1)PucR C-terminal helix-turn-helix domain
 pf:HTH_31 (9)Helix-turn-helix domain
 pf:HTH_35 (2)Winged helix-turn-helix DNA-binding
 pf:HTH_38 (2)Helix-turn-helix domain
 pf:HTH_Crp_2 (3)Crp-like helix-turn-helix domain
 pf:HTH_Tnp_ISL3 (9)Helix-turn-helix domain of transposase family ISL3
 pf:Homoserine_dh (5)Homoserine dehydrogenase
 pf:LMP (1)LMP repeated region
 pf:LacI (101)Bacterial regulatory proteins, lacI family
 pf:MEF2_binding (1)MEF2 binding
 pf:MarR_2 (2)MarR family
 pf:MazE-like (1)
 pf:MerR (58)MerR family regulatory protein
 pf:OmpH (3)Outer membrane protein (OmpH-like)
 pf:Peripla_BP_1 (101)Periplasmic binding proteins and sugar binding domain of LacI family
 pf:Peripla_BP_3 (101)Periplasmic binding protein-like domain
 pf:Peripla_BP_4 (102)Periplasmic binding protein domain
 pf:Peripla_BP_6 (5)Periplasmic binding protein
 pf:PucR (11)Purine catabolism regulatory protein-like family
 pf:PutA_1st (1)
 pf:Rad10 (1)Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
 pf:Ribosomal_L32e (17)Ribosomal protein L32
 pf:TetR_N (10)Bacterial regulatory proteins, tetR family
 pf:XPG_I_2 (1)XPG domain containing
 pf:YxiJ (2)YxiJ-like protein

afas:NZD89_24550 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

afx:JZ786_23125 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

ahal:FTX54_000960 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:ABC_sub_bind

alkg:MOJ78_17600 pf:HTH_10 pf:LacI pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3

bhai:KJK41_05480 pf:LacI pf:MerR pf:HTH_3 pf:Homoserine_dh pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3

bhk:B4U37_18730 pf:HTH_10 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

bif:N288_05140 pf:HTH_10 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

bshi:LGQ02_18900 pf:LacI pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:Peripla_BP_3

bvq:FHE72_21095 pf:LacI pf:MerR pf:Homoserine_dh pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3

cap:CLDAP_22500 pf:HTH_3 pf:LacI pf:HTH_30 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:Peripla_BP_3

coh:EAV92_21520 pf:LacI pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

csr:Cspa_c56430 pf:HTH_Tnp_ISL3 pf:DD_K pf:LacI pf:HTH_3 pf:MerR pf:HTH_10 pf:Peripla_BP_4 pf:Peripla_BP_1 pf:Peripla_BP_3

cthd:CDO33_18550 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

emp:EZMO1_0856 pf:HTH_24 pf:TetR_N pf:LacI pf:HTH_3 pf:MerR pf:HTH_Tnp_ISL3 pf:YxiJ pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

fec:QNH15_06340 pf:LacI pf:MerR pf:Homoserine_dh pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Peripla_BP_4

fia:NA23_03955 pf:HTH_Tnp_ISL3 pf:HTH_10 pf:TetR_N pf:LacI pf:HTH_3 pf:MerR pf:HTH_24 pf:HTH_31 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

fpe:Ferpe_0818 pf:HTH_10 pf:LacI pf:HTH_3 pf:MerR pf:HTH_24 pf:HTH_31 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

frr:IB67_02030 pf:HTH_Tnp_ISL3 pf:HTH_10 pf:TetR_N pf:LacI pf:HTH_3 pf:MerR pf:HTH_24 pf:HTH_31 pf:DUF6058 pf:MEF2_binding pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

gcs:MUN88_13695 pf:HTH_10 pf:LacI pf:HTH_3 pf:MerR pf:DD_K pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

gkn:PVT67_00780 pf:LacI pf:HTH_3 pf:HTH_31 pf:MerR pf:Rad10 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

grc:GI584_05905 pf:LacI pf:HTH_3 pf:OmpH pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:Peripla_BP_3

gym:GYMC10_5949 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

hhl:Halha_0229 pf:HTH_3 pf:LacI pf:HTH_24 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

hli:HLI_16055 pf:LacI pf:HTH_3 pf:HTH_26 pf:HTH_31 pf:FXR_C3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

hmn:HM131_06425 pf:LacI pf:HTH_3 pf:HTH_26 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

hnz:P9989_16490 pf:HTH_10 pf:LacI pf:HTH_3 pf:HTH_26 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

hsan:MUN89_19360 pf:LacI pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3

maeo:JRV97_09570 pf:LacI pf:MerR pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

mas:Mahau_1962 pf:HTH_10 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Glycos_transf_N pf:CbiJ pf:Peripla_BP_3

mdg:K8L98_08725 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:PucR pf:Peripla_BP_3

minf:MESINF_1318 pf:HTH_Tnp_ISL3 pf:HTH_10 pf:LacI pf:MerR pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

mpg:Theba_2486 pf:HTH_Tnp_ISL3 pf:HTH_10 pf:LacI pf:MerR pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

paea:R70723_14255 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

paee:R70331_13715 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

paeh:H70357_15775 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

palb:EJC50_24610 pf:LacI pf:MerR pf:HTH_3 pf:DD_K pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pamy:P9222_23175 pf:HTH_3 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3

pbac:HUB98_14715 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pbv:AR543_11755 pf:LacI pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pgb:H744_1c0197 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pgm:PGRAT_14260 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

phj:LC071_09185 pf:LacI pf:MerR pf:LMP pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3

phk:SK066_13950 pf:LacI pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pib:BBD41_17095 pf:LacI pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pih:UB51_24870 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3

pka:PQ456_09340 pf:LacI pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

plut:EI981_05015 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

plw:D5F53_32030 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pmah:PTQ21_02795 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pnk:AASFL403_09580 pf:LacI pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pof:GS400_17460 pf:HTH_10 pf:LacI pf:HTH_3 pf:HTH_26 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_6 pf:Peripla_BP_3

pow:IJ21_26070 pf:HTH_Tnp_ISL3 pf:LacI pf:MerR pf:HTH_3 pf:HTH_24 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3

ppab:KET34_31745 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pri:PRIO_3095 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pson:JI735_23245 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pspn:L1F29_27105 pf:HTH_3 pf:TetR_N pf:HTH_10 pf:LacI pf:HTH_24 pf:MerR pf:HTH_Crp_2 pf:Homoserine_dh pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pste:PSTEL_12920 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

ptj:JRJ22_11705 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pvo:PVOR_32231 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pxl:BS614_00565 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

pyg:AWM70_12860 pf:LacI pf:Ribosomal_L32e pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

raz:U9J35_05855 pf:HTH_10 pf:LacI pf:HTH_3 pf:MerR pf:Ribosomal_L32e pf:Homoserine_dh pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3

sap:Sulac_2023 pf:TetR_N pf:LacI pf:PutA_1st pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

sedd:ERJ70_15470 pf:HTH_10 pf:LacI pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:PucR pf:Peripla_BP_3 pf:XPG_I_2

sthr:BXT84_05275 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

thug:KNN16_12805 pf:TetR_N pf:LacI pf:HTH_31 pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:MazE-like

vbr:A6E01_04365 pf:TetR_N pf:LacI pf:HTH_3 pf:MerR pf:YxiJ pf:OmpH pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

vgu:HYG85_18450 pf:LacI pf:HTH_3 pf:MerR pf:HTH_31 pf:OmpH pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

vjp:NP165_15815 pf:HTH_Tnp_ISL3 pf:TetR_N pf:LacI pf:HTH_3 pf:HTH_31 pf:HTH_24 pf:HTH_Crp_2 pf:HTH_19 pf:MarR_2 pf:HTH_35 pf:HTH_38 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:DHDPS pf:Peripla_BP_3

vne:CFK40_15065 pf:HTH_10 pf:LacI pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

vni:VIBNI_B0130 pf:HTH_Tnp_ISL3 pf:TetR_N pf:LacI pf:MarR_2 pf:HTH_24 pf:HTH_3 pf:HTH_Crp_2 pf:HTH_35 pf:HTH_31 pf:HTH_38 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

vpn:A21D_01002 pf:LacI pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

vpt:KBP50_02370 pf:LacI pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

vta:B1613 pf:HTH_3 pf:HTH_24 pf:LacI pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3

ypa:YPA_3179 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypb:YPTS_3626 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypc:BZ23_3043 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypd:YPD4_0533 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ype:YPO0611 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypf:BZ19_2899 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypg:YpAngola_A1069 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

yph:YPC_3968 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypi:YpsIP31758_0527 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypj:CH55_2201 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypk:y3567 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypl:CH46_307 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypm:YP_2929 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypn:YPN_0474 pf:TetR_N pf:HTH_24 pf:LacI pf:HTH_3 pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypo:BZ17_3161 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypp:YPDSF_0396 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypq:DJ40_2977 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypr:BZ20_2670 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

yps:YPTB3444 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypt:A1122_02020 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypu:BZ21_2764 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypv:BZ15_2965 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypw:CH59_1254 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypx:YPD8_0535 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypy:YPK_0588 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ypz:YPZ3_0582 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2

ysi:BF17_04600 pf:HTH_24 pf:LacI pf:HTH_3 pf:MerR pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3 pf:Beta-lactamase2