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| Motifs : | pf:AAA_PrkA | PrkA AAA domain
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| | pf:AGOG | N-glycosylase/DNA lyase
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| | pf:ANIS5_cation-bd | |
| | pf:APP_E2 | E2 domain of amyloid precursor protein
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| | pf:Anti-adapt_IraP | Sigma-S stabilisation anti-adaptor protein
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| | pf:ApoA-II | Apolipoprotein A-II (ApoA-II)
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| | pf:B2 | |
| | pf:Blt1_C | Get5 carboxyl domain
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| | pf:CAAP1 | Caspase activity and apoptosis inhibitor 1
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| | pf:CDI_toxin_EC869_like | |
| | pf:CDT1_C | DNA replication factor Cdt1 C-terminal domain
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| | pf:CID | |
| | pf:COP23 | Circadian oscillating protein COP23
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| | pf:Carbpep_Y_N | Carboxypeptidase Y pro-peptide
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| | pf:Crp | Bacterial regulatory proteins, crp family
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| | pf:CtsR | Firmicute transcriptional repressor of class III stress genes (CtsR)
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| | pf:DAG_kinase_N | Diacylglycerol kinase N-terminus
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| | pf:DSBA | DSBA-like thioredoxin domain
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| | pf:DUF134 | Protein of unknown function DUF134
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| | pf:DUF1488 | Protein of unknown function (DUF1488)
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| | pf:DUF1492 | Protein of unknown function (DUF1492)
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| | pf:DUF2115 | Uncharacterized protein conserved in archaea (DUF2115)
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| | pf:DUF2325 | Uncharacterized protein conserved in bacteria (DUF2325)
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| | pf:DUF2523 | Protein of unknown function (DUF2523)
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| | pf:DUF2774 | Protein of unknown function (DUF2774)
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| | pf:DUF29 | Domain of unknown function DUF29
|
| | pf:DUF3071 | Protein of unknown function (DUF3071)
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| | pf:DUF3291 | Domain of unknown function (DUF3291)
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| | pf:DUF3562 | Protein of unknown function (DUF3562)
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| | pf:DUF4164 | Domain of unknown function (DUF4164)
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| | pf:DUF5623 | |
| | pf:DUF5759 | |
| | pf:DUF5805 | |
| | pf:DUF6174 | |
| | pf:DUF6227 | |
| | pf:DUF6241 | |
| | pf:DUF6362 | |
| | pf:DUF6762 | |
| | pf:DUF6827 | |
| | pf:DUF746 | Domain of Unknown Function (DUF746)
|
| | pf:Epsilon_antitox | Bacterial epsilon antitoxin
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| | pf:FAM198 | FAM198 protein
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| | pf:FDX-ACB | Ferredoxin-fold anticodon binding domain
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| | pf:GBS_Bsp-like | GBS Bsp-like repeat
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| | pf:Gemini_AL1_M | Geminivirus rep protein central domain
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| | pf:GerE | Bacterial regulatory proteins, luxR family
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| | pf:GntR | Bacterial regulatory proteins, gntR family
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| | pf:HTH_1 | Bacterial regulatory helix-turn-helix protein, lysR family
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| | pf:HTH_10 | HTH DNA binding domain
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| | pf:HTH_11 | HTH domain
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| | pf:HTH_16 | Helix-turn-helix domain
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| | pf:HTH_17 | Helix-turn-helix domain
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| | pf:HTH_20 | Helix-turn-helix domain
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| | pf:HTH_23 | Homeodomain-like domain
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| | pf:HTH_24 | Winged helix-turn-helix DNA-binding
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| | pf:HTH_25 | Helix-turn-helix domain
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| | pf:HTH_28 | Helix-turn-helix domain
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| | pf:HTH_29 | Winged helix-turn helix
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| | pf:HTH_3 | Helix-turn-helix
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| | pf:HTH_30 | PucR C-terminal helix-turn-helix domain
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| | pf:HTH_36 | Helix-turn-helix domain
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| | pf:HTH_38 | Helix-turn-helix domain
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| | pf:HTH_40 | Helix-turn-helix domain
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| | pf:HTH_5 | Bacterial regulatory protein, arsR family
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| | pf:HTH_7 | Helix-turn-helix domain of resolvase
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| | pf:HTH_8 | Bacterial regulatory protein, Fis family
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| | pf:HTH_AsnC-type | AsnC-type helix-turn-helix domain
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| | pf:HTH_Crp_2 | Crp-like helix-turn-helix domain
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| | pf:HTH_DeoR | DeoR-like helix-turn-helix domain
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| | pf:HTH_Mga | M protein trans-acting positive regulator (MGA) HTH domain
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| | pf:HTH_Tnp_4 | Helix-turn-helix of DDE superfamily endonuclease
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| | pf:HTH_Tnp_ISL3 | Helix-turn-helix domain of transposase family ISL3
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| | pf:Hph | Sec63/Sec62 complex-interacting family
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| | pf:HrcA_DNA-bdg | Winged helix-turn-helix transcription repressor, HrcA DNA-binding
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| | pf:Hydrolase | haloacid dehalogenase-like hydrolase
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| | pf:Hydrolase_3 | haloacid dehalogenase-like hydrolase
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| | pf:IL28A | Interleukin-28A
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| | pf:Importin_rep_6 | |
| | pf:KIAA1328 | Uncharacterised protein KIAA1328
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| | pf:KORA | TrfB plasmid transcriptional repressor
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| | pf:KorB | KorB domain
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| | pf:LMWPc | Low molecular weight phosphotyrosine protein phosphatase
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| | pf:Lipoprotein_23 | |
| | pf:LuxS | S-Ribosylhomocysteinase (LuxS)
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| | pf:MADF_DNA_bdg | Alcohol dehydrogenase transcription factor Myb/SANT-like
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| | pf:MSP7_C | MSP7-like protein C-terminal domain
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| | pf:MarR | MarR family
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| | pf:MarR_2 | MarR family
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| | pf:Mating_N | Mating-type protein beta 1
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| | pf:MerR | MerR family regulatory protein
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| | pf:NTPase_1 | NTPase
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| | pf:Nit_Regul_Hom | Uncharacterized protein, homolog of nitrogen regulatory protein PII
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| | pf:PARG_cat_C | |
| | pf:PCI | PCI domain
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| | pf:PIN_2 | PIN domain
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| | pf:PIN_5 | PINc domain ribonuclease
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| | pf:Paramyxo_C | Paramyxovirus non-structural protein C
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| | pf:Peptidase_C30 | Coronavirus endopeptidase C30
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| | pf:Phage_terminase | Phage terminase small subunit
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| | pf:Pou | Pou domain - N-terminal to homeobox domain
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| | pf:Pox_P35 | Poxvirus P35 protein
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| | pf:PseudoU_synth_1 | tRNA pseudouridine synthase
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| | pf:R3H-assoc | R3H-associated N-terminal domain
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| | pf:RPA_C | Replication protein A C terminal
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| | pf:RYDR_ITPR | RIH domain
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| | pf:RecQ_Zn_bind | RecQ zinc-binding
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| | pf:Relaxase_C | |
| | pf:SH2_2 | SH2 domain
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| | pf:Sigma70_ECF | ECF sigma factor
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| | pf:Sigma70_r2 | Sigma-70 region 2
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| | pf:Sigma70_r3 | Sigma-70 region 3
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| | pf:Sigma70_r4 | Sigma-70, region 4
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| | pf:Sigma70_r4_2 | Sigma-70, region 4
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| | pf:Stealth_CR3 | Stealth protein CR3, conserved region 3
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| | pf:Sulfotransfer_4 | |
| | pf:SurA_N_3 | SurA N-terminal domain
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| | pf:TetR_C_8 | Transcriptional regulator C-terminal region
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| | pf:TnsD | Tn7-like transposition protein D
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| | pf:Tox-ODYAM1 | Toxin in Odyssella and Amoebophilus
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| | pf:TraC_F_IV | F pilus assembly Type-IV secretion system for plasmid transfer
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| | pf:Trehalose_recp | Trehalose receptor
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| | pf:Trp_repressor | Trp repressor protein
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| | pf:UPF0029 | Uncharacterized protein family UPF0029
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| | pf:UPF0122 | Putative helix-turn-helix protein, YlxM / p13 like
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| | pf:Xre-like-HTH | |
| | pf:YodL | YodL-like
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| | pf:Zona_pellucida | Zona pellucida-like domain
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