Search common motifs in selected sequences


  
Motifs : pf:A-2_8-polySTAlpha-2,8-polysialyltransferase (POLYST)
 pf:AAAATPase family associated with various cellular activities (AAA)
 pf:AAA_14AAA domain
 pf:AAA_15AAA ATPase domain
 pf:AAA_16AAA ATPase domain
 pf:AAA_18AAA domain
 pf:AAA_2AAA domain (Cdc48 subfamily)
 pf:AAA_21AAA domain, putative AbiEii toxin, Type IV TA system
 pf:AAA_22AAA domain
 pf:AAA_23AAA domain
 pf:AAA_24AAA domain
 pf:AAA_25AAA domain
 pf:AAA_28AAA domain
 pf:AAA_29P-loop containing region of AAA domain
 pf:AAA_33AAA domain
 pf:AAA_5AAA domain (dynein-related subfamily)
 pf:AAA_PrkAPrkA AAA domain
 pf:ABC1ABC1 family
 pf:ABC_tranABC transporter
 pf:ADIPAfadin- and alpha -actinin-Binding
 pf:ATG19
 pf:ATP-grasp_3ATP-grasp domain
 pf:ATPaseKaiC
 pf:ATPase_2ATPase domain predominantly from Archaea
 pf:ATPgrasp_STSugar-transfer associated ATP-grasp
 pf:ATPgrasp_YheCDYheC/D like ATP-grasp
 pf:AcyltransferaseAcyltransferase
 pf:Adeno_IVa2Adenovirus IVa2 protein
 pf:Allexi_40kDaAllexivirus 40kDa protein
 pf:AmidaseAmidase
 pf:BLOC1_2Biogenesis of lysosome-related organelles complex-1 subunit 2
 pf:BOP1NTBOP1NT (NUC169) domain
 pf:BPL_CBiotin protein ligase C terminal domain
 pf:Baculo_PEP_CBaculovirus polyhedron envelope protein, PEP, C terminus
 pf:BeachBeige/BEACH domain
 pf:Big_2Bacterial Ig-like domain (group 2)
 pf:CCDC90-like
 pf:CENP-F_leu_zipLeucine-rich repeats of kinetochore protein Cenp-F/LEK1
 pf:CREPTCell-cycle alteration and expression-elevated protein in tumour
 pf:CTLH
 pf:ChlISubunit ChlI of Mg-chelatase
 pf:Cluap1Clusterin-associated protein-1
 pf:CooC_CCS1-pili formation C-terminal
 pf:Crescentin
 pf:Cyt_bd_oxida_ICytochrome bd terminal oxidase subunit I
 pf:DFRP_CDRG Family Regulatory Proteins, Tma46
 pf:DNA_pol3_alphaBacterial DNA polymerase III alpha subunit
 pf:DNA_pol3_finger
 pf:DO-GTPase2
 pf:DUF16Protein of unknown function DUF16
 pf:DUF1664Protein of unknown function (DUF1664)
 pf:DUF1732Domain of unknown function (DUF1732)
 pf:DUF2203Uncharacterized conserved protein (DUF2203)
 pf:DUF3450Protein of unknown function (DUF3450)
 pf:DUF4131Domain of unknown function (DUF4131)
 pf:DUF4200Domain of unknown function (DUF4200)
 pf:DUF4349Domain of unknown function (DUF4349)
 pf:DUF4559Domain of unknown function (DUF4559)
 pf:DUF489Protein of unknown function (DUF489)
 pf:DUF5771
 pf:DUF6781
 pf:EF-hand_1EF hand
 pf:EF-hand_4Cytoskeletal-regulatory complex EF hand
 pf:EF-hand_5EF hand
 pf:EF-hand_6EF-hand domain
 pf:EF-hand_7EF-hand domain pair
 pf:EF-hand_8EF-hand domain pair
 pf:EFhand_Ca_insenCa2+ insensitive EF hand
 pf:ENTENT domain
 pf:ESPExocrine gland-secreting peptide
 pf:ESPRExtended Signal Peptide of Type V secretion system
 pf:FAA_hydrolaseFumarylacetoacetate (FAA) hydrolase family
 pf:FAA_hydrolase_NFumarylacetoacetase N-terminal
 pf:FAD_binding_6Oxidoreductase FAD-binding domain
 pf:FAD_binding_9Siderophore-interacting FAD-binding domain
 pf:FCHFes/CIP4, and EFC/F-BAR homology domain
 pf:FapA
 pf:Fer22Fe-2S iron-sulfur cluster binding domain
 pf:Fer2_32Fe-2S iron-sulfur cluster binding domain
 pf:Fer2_42Fe-2S iron-sulfur cluster binding domain
 pf:FilamentIntermediate filament protein
 pf:FlaC_archFlagella accessory protein C (FlaC)
 pf:FokI_D3
 pf:Fungal_transFungal specific transcription factor domain
 pf:GAFGAF domain
 pf:GAF_2GAF domain
 pf:GAF_3GAF domain
 pf:GEVED
 pf:Gemin6_C
 pf:GlugThe GLUG motif
 pf:Glyco_hydro_43Glycosyl hydrolases family 43
 pf:Glyco_transf_52Glycosyltransferase family 52
 pf:HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HATPase_c_2Histidine kinase-like ATPase domain
 pf:HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HATPase_c_5GHKL domain
 pf:HCBP_relatedHaemolysin-type calcium binding protein related domain
 pf:HHH_3Helix-hairpin-helix motif
 pf:HHH_6Helix-hairpin-helix motif
 pf:HTH_18Helix-turn-helix domain
 pf:HTH_43Winged helix-turn helix
 pf:HTH_AraCBacterial regulatory helix-turn-helix proteins, AraC family
 pf:HisKAHis Kinase A (phospho-acceptor) domain
 pf:Imm30Immunity protein 30
 pf:JHY
 pf:KELKKELK-motif containing domain of MRCK Ser/Thr protein kinase
 pf:KdoLipopolysaccharide kinase (Kdo/WaaP) family
 pf:Kinase-likeKinase-like
 pf:LAM_CLysine-2,3-aminomutase
 pf:LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain
 pf:LRRC37AB_CLRRC37A/B like protein 1 C-terminal domain
 pf:LolA_likeOuter membrane lipoprotein-sorting protein
 pf:Lon_CLon protease (S16) C-terminal proteolytic domain
 pf:Lyase_8Polysaccharide lyase family 8, super-sandwich domain
 pf:MBG_2
 pf:MCR_alphaMethyl-coenzyme M reductase alpha subunit, C-terminal domain
 pf:MafMaf-like protein
 pf:MbeD_MobDMbeD/MobD like
 pf:Med28Mediator complex subunit 28
 pf:MgtE_NMgtE intracellular N domain
 pf:Mpv17_PMP22Mpv17 / PMP22 family
 pf:MucB_RseBMucB/RseB N-terminal domain
 pf:MucB_RseB_CMucB/RseB C-terminal domain
 pf:NACHTNACHT domain
 pf:NAD_binding_1Oxidoreductase NAD-binding domain
 pf:NAD_binding_6Ferric reductase NAD binding domain
 pf:NB-ARCNB-ARC domain
 pf:NEPRO_N
 pf:NPV_P10Nucleopolyhedrovirus P10 protein
 pf:NTPase_1NTPase
 pf:NagA_C
 pf:Ndc80_HECHEC/Ndc80p family
 pf:NusBNusB family
 pf:OmpHOuter membrane protein (OmpH-like)
 pf:OrfB_IS605Probable transposase
 pf:OrfB_Zn_ribbonPutative transposase DNA-binding domain
 pf:Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domain
 pf:PASPAS fold
 pf:PAS_11PAS domain
 pf:PAS_3PAS fold
 pf:PAS_4PAS fold
 pf:PAS_6YheO-like PAS domain
 pf:PAS_8PAS domain
 pf:PAS_9PAS domain
 pf:PBP_dimerPenicillin-binding Protein dimerisation domain
 pf:PHPPHP domain
 pf:PK_Tyr_Ser-Thr
 pf:PMC2NTPMC2NT (NUC016) domain
 pf:PMI_typeI_hel
 pf:PPV_E1_CPapillomavirus helicase
 pf:PQQPQQ enzyme repeat
 pf:PQQ_2PQQ-like domain
 pf:PQQ_3PQQ-like domain
 pf:PRKPhosphoribulokinase / Uridine kinase family
 pf:Peripla_BP_6Periplasmic binding protein
 pf:PkinaseProtein kinase domain
 pf:Pkinase_fungal
 pf:Por_Secre_tail
 pf:RNA_helicaseRNA helicase
 pf:Rad17Rad17 cell cycle checkpoint protein
 pf:Rad21_Rec8Conserved region of Rad21 / Rec8 like protein
 pf:Reprolysin_3Metallo-peptidase family M12B Reprolysin-like
 pf:Reprolysin_4Metallo-peptidase family M12B Reprolysin-like
 pf:Reprolysin_5Metallo-peptidase family M12
 pf:ResIIIType III restriction enzyme, res subunit
 pf:RotamasePPIC-type PPIASE domain
 pf:Rotamase_2PPIC-type PPIASE domain
 pf:Rotamase_3PPIC-type PPIASE domain
 pf:RsgA_GTPase
 pf:RuvB_NHolliday junction DNA helicase ruvB N-terminus
 pf:SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle
 pf:SKIShikimate kinase
 pf:SLATT_6
 pf:SMC_NRecF/RecN/SMC N terminal domain
 pf:SMC_ScpASegregation and condensation protein ScpA
 pf:SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding region
 pf:SWI2_SNF2
 pf:Sec1Sec1 family
 pf:Seryl_tRNA_NSeryl-tRNA synthetase N-terminal domain
 pf:Sigma70_nerSigma-70, non-essential region
 pf:Spike_torovirinTorovirinae spike glycoprotein
 pf:SpoIVA_ATPase
 pf:SpoOE-likeSpo0E like sporulation regulatory protein
 pf:Stap_Strp_toxinStaphylococcal/Streptococcal toxin, OB-fold domain
 pf:SurA_N_2SurA N-terminal domain
 pf:SurA_N_3SurA N-terminal domain
 pf:TAPR1-like
 pf:TMPITTMPIT-like protein
 pf:TPS
 pf:TTLTubulin-tyrosine ligase family
 pf:TolA_bind_triTolA binding protein trimerisation
 pf:TranspeptidasePenicillin binding protein transpeptidase domain
 pf:TropomyosinTropomyosin
 pf:UPF0242Uncharacterised protein family (UPF0242)
 pf:Uds1Up-regulated During Septation
 pf:VITVault protein inter-alpha-trypsin domain
 pf:VWAvon Willebrand factor type A domain
 pf:VWA_2von Willebrand factor type A domain
 pf:VWA_3von Willebrand factor type A domain
 pf:VWA_CoxEVWA domain containing CoxE-like protein
 pf:Viral_helicase1Viral (Superfamily 1) RNA helicase
 pf:WD40WD domain, G-beta repeat
 pf:YDG
 pf:Z1Z1 domain
 pf:Zn_clusFungal Zn(2)-Cys(6) binuclear cluster domain
 pf:fn3Fibronectin type III domain
 pf:fn3_2Fibronectin type III domain
 pf:nSTAND1
 pf:nSTAND3
 pf:tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)
 pf:tRNA_anti-codonOB-fold nucleic acid binding domain
 pf:vWA-TerF-likevWA found in TerF C terminus
 pf:zf-HC2Putative zinc-finger

agif:122853328 pf:Big_2

ajc:117103074 pf:LRRC37AB_C

amyt:AMYT_1433 pf:PAS pf:PAS_9 pf:PAS_11 pf:PAS_4 pf:PAS_8 pf:PAS_3 pf:PAS_6 pf:HisKA pf:FCH pf:HATPase_c

apc:HIMB59_00010950 pf:Seryl_tRNA_N pf:CENP-F_leu_zip pf:Crescentin pf:DUF3450 pf:DUF1664 pf:FapA pf:Baculo_PEP_C pf:DUF2203 pf:DUF4200 pf:OmpH pf:ADIP pf:CCDC90-like pf:UPF0242 pf:Cluap1 pf:Spike_torovirin pf:TMPIT pf:BLOC1_2 pf:Uds1 pf:PMI_typeI_hel pf:CREPT pf:FlaC_arch pf:tRNA-synt_2b

aseg:NCTC10977_00474 pf:HTH_43 pf:MucB_RseB pf:LolA_like pf:MucB_RseB_C

bgf:BC1003_5460 pf:PQQ_2 pf:PQQ_3 pf:PQQ_2 pf:PQQ pf:PQQ pf:PQQ_2 pf:PQQ_3 pf:PQQ

bgt:106068632 pf:VIT pf:VWA_CoxE pf:VWA pf:VWA_3 pf:VWA_2 pf:vWA-TerF-like

bjo:QIA21_00810 pf:SurA_N_3 pf:SurA_N_2 pf:DUF5771 pf:Rotamase_2 pf:Rotamase_3 pf:Rotamase pf:Rotamase_2

camp:CFT03427_0358 pf:BOP1NT

camr:CAQ16704_0801 pf:NagA_C

canu:128187015 pf:DUF4131 pf:Acyltransferase pf:EF-hand_8 pf:EF-hand_4 pf:EF-hand_7 pf:EF-hand_1 pf:EF-hand_6 pf:EF-hand_5 pf:SPARC_Ca_bdg pf:EFhand_Ca_insen pf:EF-hand_7 pf:EF-hand_1 pf:EF-hand_6 pf:EF-hand_5 pf:EF-hand_8 pf:EF-hand_1 pf:EF-hand_5 pf:EF-hand_6

carm:CARM_0814 pf:NagA_C



ccf:YSQ_05325 pf:CooC_C


ccoc:CCON33237_0039 pf:SLATT_6




ccq:N149_0756 pf:CooC_C

ccun:CCUN_0748 pf:Maf


ccy:YSS_04080 pf:CooC_C

cfm:BJL90_01385 pf:ResIII pf:SWI2_SNF2 pf:Z1

cfp:CR44_01800 pf:BOP1NT

chk:D4L85_31485 pf:Lyase_8 pf:HTH_18 pf:HTH_AraC

chv:CHELV3228_0979 pf:NagA_C

cjap:GWK36_11670 pf:ESPR pf:TPS pf:Glug pf:Glug pf:Glug pf:Glug pf:Glug pf:Glug pf:Glug pf:Glug pf:Glug pf:Glug pf:YDG pf:YDG pf:YDG pf:YDG pf:YDG pf:YDG pf:YDG pf:YDG pf:YDG pf:YDG pf:YDG pf:YDG pf:MBG_2




cjei:N135_00839 pf:LAM_C

cjej:N564_00773 pf:LAM_C

cjen:N755_00814 pf:LAM_C

cjer:H730_04970 pf:CooC_C

cjeu:N565_00817 pf:LAM_C


cjj:CJJ81176_0835 pf:CooC_C

cjl:PJ17_03855 pf:CooC_C




cjq:UC78_0757 pf:CooC_C pf:Stap_Strp_toxin

cjr:CJE0885 pf:CooC_C








clec:106667739 pf:TTL pf:ATP-grasp_3 pf:ATPgrasp_ST pf:ATPgrasp_YheCD pf:PMC2NT

cln:UPTC3659_0851 pf:NagA_C

cnn:CNEO_0710 pf:DFRP_C pf:PBP_dimer pf:Transpeptidase pf:Transpeptidase


coj:CORN_0833 pf:NagA_C


cpel:CPEL_0812 pf:NagA_C

crs:FQB35_08035 pf:zf-HC2 pf:DUF4349 pf:ENT pf:Med28 pf:KELK

csho:CSHOW_1197 pf:Sigma70_ner pf:NusB



cvu:CVULP_1093 pf:HCBP_related

dha:DEHA2G07040g pf:Cyt_bd_oxida_I pf:Mpv17_PMP22

dka:DKAM_0651 pf:BPL_C pf:Orn_Arg_deC_N pf:ATG19

dpol:127833643 pf:DUF4559 pf:DUF6781 pf:NB-ARC pf:nSTAND3 pf:AAA_16 pf:NACHT pf:RNA_helicase

dsm:124406611 pf:NEPRO_N pf:DUF1732

dzi:111294439 pf:LON_substr_bdg pf:AAA_PrkA pf:RuvB_N pf:AAA_16 pf:AAA_22 pf:nSTAND3 pf:AAA_14 pf:AAA pf:AAA_5 pf:AAA_2 pf:AAA_18 pf:RNA_helicase pf:NTPase_1 pf:SKI pf:Lon_C pf:ChlI

feh:LZF87_05705 pf:Reprolysin_5 pf:Reprolysin_4 pf:Reprolysin_3 pf:fn3_2 pf:fn3 pf:fn3_2 pf:fn3 pf:fn3_2 pf:fn3 pf:fn3_2 pf:fn3 pf:GEVED pf:Por_Secre_tail

fki:FK004_18950 pf:SBP_bac_5 pf:Peripla_BP_6

gml:ISF26_04730 pf:Amidase

gvi:gll1528 pf:Amidase

had:CDV25_06210 pf:Imm30

kaf:KAFR_0D04480 pf:TAPR1-like

mfeg:GCM10025860_00830 pf:AAA_23 pf:SpoIVA_ATPase pf:PPV_E1_C pf:nSTAND1 pf:ABC_tran pf:AAA_15 pf:RsgA_GTPase pf:Rad17 pf:Adeno_IVa2 pf:AAA_29 pf:AAA_25 pf:SMC_N pf:ATPase_2 pf:AAA_14 pf:AAA_21 pf:AAA_22 pf:AAA_24 pf:AAA_33 pf:AAA_16 pf:PRK pf:AAA_18 pf:AAA pf:RNA_helicase pf:AAA_5 pf:AAA_28 pf:Gemin6_C pf:AAA_21

mhh:MYM_0432 pf:SMC_ScpA pf:JHY pf:Rad21_Rec8

mhm:SRH_03850 pf:SMC_ScpA pf:JHY pf:Rad21_Rec8

mhr:MHR_0417 pf:SMC_ScpA pf:JHY pf:Rad21_Rec8

mhs:MOS_465 pf:SMC_ScpA pf:JHY pf:Rad21_Rec8

mhv:Q453_0463 pf:SMC_ScpA pf:JHY pf:Rad21_Rec8

mnt:21405239 pf:Sec1 pf:Allexi_40kDa


nyn:U0035_20290 pf:Glyco_hydro_43

ota:OT_ostta03g00940 pf:Beach pf:PQQ_3 pf:WD40

paco:AACT_2439 pf:OrfB_IS605 pf:OrfB_Zn_ribbon

parb:CJU94_31220 pf:PQQ_2 pf:PQQ_3 pf:PQQ_2 pf:PQQ pf:PQQ pf:PQQ_2 pf:PQQ_3 pf:PQQ

pex:IZT61_08195 pf:AAA_14 pf:ATPase pf:AAA_16 pf:DO-GTPase2 pf:RuvB_N pf:AAA_28 pf:Viral_helicase1 pf:AAA

pgb:H744_2c0482 pf:A-2_8-polyST pf:Glyco_transf_52

pou:POX_b03219 pf:Ndc80_HEC pf:Crescentin pf:NPV_P10 pf:Filament pf:DUF3450 pf:DUF16 pf:Tropomyosin pf:Crescentin

psap:JHX88_13855 pf:FAD_binding_6 pf:FAD_binding_9 pf:NAD_binding_6 pf:NAD_binding_1 pf:Fer2_4 pf:Fer2 pf:Fer2_3

psb:Psyr_3325 pf:FAA_hydrolase_N pf:FAA_hydrolase

psku:KUIN1_32840 pf:FAA_hydrolase_N pf:FAA_hydrolase

riv:Riv7116_1316 pf:Pkinase pf:PK_Tyr_Ser-Thr pf:Kdo pf:Pkinase_fungal pf:ABC1 pf:Kinase-like pf:AAA_16 pf:nSTAND1 pf:GAF pf:GAF_2 pf:GAF_3 pf:HisKA pf:HATPase_c pf:HATPase_c_5 pf:HATPase_c_3 pf:HATPase_c_2

sbal:HUE88_07675 pf:PHP pf:SpoOE-like pf:DNA_pol3_alpha pf:FokI_D3 pf:DNA_pol3_finger pf:HHH_6 pf:HHH_3 pf:tRNA_anti-codon

sku:Sulku_1532 pf:MCR_alpha pf:MgtE_N

spaa:SPAPADRAFT_131427 pf:DUF489 pf:MbeD_MobD pf:TolA_bind_tri

ssck:SPSK_02972 pf:Zn_clus pf:Fungal_trans pf:ESP


tgb:HG536_0A03270 pf:CTLH