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Motifs : | pf:AAA | ATPase family associated with various cellular activities (AAA)
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| pf:AAA_14 | AAA domain
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| pf:AAA_15 | AAA ATPase domain
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| pf:AAA_18 | AAA domain
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| pf:AAA_19 | AAA domain
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| pf:AAA_2 | AAA domain (Cdc48 subfamily)
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| pf:AAA_21 | AAA domain, putative AbiEii toxin, Type IV TA system
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| pf:AAA_22 | AAA domain
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| pf:AAA_23 | AAA domain
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| pf:AAA_28 | AAA domain
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| pf:AAA_29 | P-loop containing region of AAA domain
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| pf:AAA_33 | AAA domain
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| pf:AAA_5 | AAA domain (dynein-related subfamily)
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| pf:AAA_lid_9 | |
| pf:ABC_tran | ABC transporter
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| pf:AIG1 | AIG1 family
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| pf:ANAPC3 | Anaphase-promoting complex, cyclosome, subunit 3
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| pf:ANF_receptor | Receptor family ligand binding region
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| pf:APG6_N | |
| pf:ATG16 | Autophagy protein 16 (ATG16)
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| pf:AhtL-like_1st | |
| pf:Apolipoprotein | Apolipoprotein A1/A4/E domain
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| pf:Arf | ADP-ribosylation factor family
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| pf:AsmA_2 | AsmA-like C-terminal region
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| pf:B5 | tRNA synthetase B5 domain
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| pf:BMT5-like | |
| pf:Bacillus_HBL | Bacillus haemolytic enterotoxin (HBL)
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| pf:Baculo_PEP_C | Baculovirus polyhedron envelope protein, PEP, C terminus
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| pf:Bromodomain | Bromodomain
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| pf:COG4_N | |
| pf:Cas_APE2256 | CRISPR-associated protein (Cas_APE2256)
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| pf:CdaS_N | |
| pf:ClpB_D2-small | C-terminal, D2-small domain, of ClpB protein
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| pf:Clp_N | Clp amino terminal domain, pathogenicity island component
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| pf:Crescentin | |
| pf:Csm1_B | |
| pf:Csm4_C | |
| pf:DEAD | DEAD/DEAH box helicase
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| pf:DNA_gyraseA_C | DNA gyrase C-terminal domain, beta-propeller
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| pf:DNA_topoisoIV | DNA gyrase/topoisomerase IV, subunit A
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| pf:DNMT1-RFD | Cytosine specific DNA methyltransferase replication foci domain
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| pf:DUF1151 | Protein of unknown function (DUF1151)
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| pf:DUF1524 | Protein of unknown function (DUF1524)
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| pf:DUF1664 | Protein of unknown function (DUF1664)
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| pf:DUF1722 | Protein of unknown function (DUF1722)
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| pf:DUF2460 | Conserved hypothetical protein 2217 (DUF2460)
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| pf:DUF262 | Protein of unknown function DUF262
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| pf:DUF3670 | SNF2 Helicase protein
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| pf:DUF4407 | Domain of unknown function (DUF4407)
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| pf:DUF4781 | Domain of unknown function (DUF4781)
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| pf:DUF4854 | Domain of unknown function (DUF4854)
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| pf:DUF5684 | |
| pf:DUF948 | Bacterial protein of unknown function (DUF948)
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| pf:DZR | Double zinc ribbon
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| pf:DZR_2 | |
| pf:Dynamin_N | Dynamin family
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| pf:Exonuc_VII_L | Exonuclease VII, large subunit
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| pf:Exonuc_V_gamma | Exodeoxyribonuclease V, gamma subunit
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| pf:FDX-ACB | Ferredoxin-fold anticodon binding domain
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| pf:FeoB_N | Ferrous iron transport protein B
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| pf:Fez1 | Fez1
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| pf:GGDEF | Diguanylate cyclase, GGDEF domain
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| pf:GGDEF_2 | |
| pf:GTP1_OBG | GTP1/OBG
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| pf:GTP_EFTU | Elongation factor Tu GTP binding domain
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| pf:GlnD_UR_UTase | GlnD PII-uridylyltransferase
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| pf:GlnE | Glutamate-ammonia ligase adenylyltransferase
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| pf:HEPN | HEPN domain
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| pf:Helicase_C | Helicase conserved C-terminal domain
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| pf:HrpB7 | Bacterial type III secretion protein (HrpB7)
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| pf:IF2_N | Translation initiation factor IF-2, N-terminal region
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| pf:IPPT | IPP transferase
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| pf:IPT | Isopentenyl transferase
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| pf:Kinesin | Kinesin motor domain
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| pf:LRR_1 | Leucine Rich Repeat
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| pf:LRR_4 | Leucine Rich repeats (2 copies)
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| pf:LRR_8 | Leucine rich repeat
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| pf:LRR_9 | Leucine-rich repeat
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| pf:LTP_2 | Probable lipid transfer
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| pf:Lig_chan | Ligand-gated ion channel
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| pf:Lig_chan-Glu_bd | Ligated ion channel L-glutamate- and glycine-binding site
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| pf:Linker_histone | linker histone H1 and H5 family
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| pf:LupA | |
| pf:MMR_HSR1 | 50S ribosome-binding GTPase
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| pf:Maf_flag10_N | |
| pf:Meth_synt_1 | Cobalamin-independent synthase, N-terminal domain
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| pf:Meth_synt_2 | Cobalamin-independent synthase, Catalytic domain
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| pf:Microtub_bd | Microtubule binding
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| pf:MptE-like | |
| pf:MtrG | Tetrahydromethanopterin S-methyltransferase, subunit G
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| pf:Mycop_pep_DUF31 | |
| pf:NFACT-R_1 | |
| pf:NFACT-R_2 | |
| pf:NFACT_N | |
| pf:NTP_transf_2 | Nucleotidyltransferase domain
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| pf:NUMOD4 | NUMOD4 motif
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| pf:Occludin_ELL | Occludin homology domain
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| pf:PAPS_reduct | Phosphoadenosine phosphosulfate reductase family
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| pf:PNPase_C | Polyribonucleotide phosphorylase C terminal
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| pf:Peptidase_C48 | Ulp1 protease family, C-terminal catalytic domain
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| pf:Peptidase_M16 | Insulinase (Peptidase family M16)
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| pf:Peptidase_M16_C | Peptidase M16 inactive domain
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| pf:Peptidase_S26 | Signal peptidase, peptidase S26
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| pf:Peptidase_S7 | Peptidase S7, Flavivirus NS3 serine protease
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| pf:Polbeta | |
| pf:Por_Secre_tail | |
| pf:RAMPs | RAMP superfamily
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| pf:RAP | RAP domain
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| pf:RNA_helicase | RNA helicase
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| pf:RNase_E_G | Ribonuclease E/G family
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| pf:RNase_E_G_Thio | |
| pf:RecC_C | |
| pf:Recombinase | Recombinase
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| pf:ResIII | Type III restriction enzyme, res subunit
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| pf:Ribosomal_S5_C | Ribosomal protein S5, C-terminal domain
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| pf:RsgA_GTPase | |
| pf:RuvB_N | Holliday junction DNA helicase ruvB N-terminus
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| pf:S1 | S1 RNA binding domain
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| pf:SBP_bac_3 | Bacterial extracellular solute-binding proteins, family 3
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| pf:SMC_N | RecF/RecN/SMC N terminal domain
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| pf:SMC_hinge | SMC proteins Flexible Hinge Domain
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| pf:SNF2-rel_dom | |
| pf:SRPRB | Signal recognition particle receptor beta subunit
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| pf:SRP_SPB | Signal peptide binding domain
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| pf:SWIM | SWIM zinc finger
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| pf:Sigma54_activat | Sigma-54 interaction domain
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| pf:Sigma70_ner | Sigma-70, non-essential region
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| pf:Sigma70_r1_1 | Sigma-70 factor, region 1.1
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| pf:Sigma70_r1_2 | Sigma-70 factor, region 1.2
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| pf:Sigma70_r2 | Sigma-70 region 2
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| pf:Sigma70_r3 | Sigma-70 region 3
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| pf:Sigma70_r4 | Sigma-70, region 4
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| pf:SurA_N | SurA N-terminal domain
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| pf:T2SSE | Type II/IV secretion system protein
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| pf:TPR_1 | Tetratricopeptide repeat
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| pf:TPR_10 | Tetratricopeptide repeat
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| pf:TPR_11 | TPR repeat
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| pf:TPR_12 | Tetratricopeptide repeat
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| pf:TPR_16 | Tetratricopeptide repeat
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| pf:TPR_17 | Tetratricopeptide repeat
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| pf:TPR_19 | Tetratricopeptide repeat
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| pf:TPR_2 | Tetratricopeptide repeat
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| pf:TPR_20 | Tetratricopeptide repeat
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| pf:TPR_8 | Tetratricopeptide repeat
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| pf:TPR_9 | Tetratricopeptide repeat
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| pf:TRAF_BIRC3_bd | TNF receptor-associated factor BIRC3 binding domain
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| pf:Taxilin | Myosin-like coiled-coil protein
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| pf:Torsin | Torsin
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| pf:UvrD-helicase | UvrD/REP helicase N-terminal domain
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| pf:UvrD_C | UvrD-like helicase C-terminal domain
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| pf:UvrD_C_2 | UvrD-like helicase C-terminal domain
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| pf:V-ATPase_C | V-ATPase subunit C
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| pf:VAR1 | Mitochondrial ribosomal protein (VAR1)
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| pf:WSD | Williams-Beuren syndrome DDT (WSD), D-TOX E motif
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| pf:WWE | WWE domain
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| pf:XLF | XLF-Cernunnos, XRcc4-like factor, NHEJ component
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| pf:Zeta_toxin | Zeta toxin
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| pf:Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain
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| pf:tRNA-synt_1 | tRNA synthetases class I (I, L, M and V)
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| pf:tRNA-synt_1e | tRNA synthetases class I (C) catalytic domain
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| pf:tRNA-synt_1g | tRNA synthetases class I (M)
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| pf:tRNA_bind | Putative tRNA binding domain
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| pf:tRNA_synthFbeta | |
| pf:zinc_ribbon_15 | zinc-ribbon family
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