Search common motifs in selected sequences


  
Motifs : pf:ACR_tran (1)AcrB/AcrD/AcrF family
 pf:ASL_C (2)Adenylosuccinate lyase C-terminal
 pf:Aft1_OSA (8)Aft1 osmotic stress response (OSM) domain
 pf:Amidase (1)Amidase
 pf:Bac_rhamnosid6H (1)
 pf:Borrelia_P83 (1)Borrelia P83/100 protein
 pf:CodY (1)CodY GAF-like domain
 pf:DDE_Tnp_ISL3 (1)Transposase
 pf:DNA_primase_lrg (78)Eukaryotic and archaeal DNA primase, large subunit
 pf:DUF2201 (1)VWA-like domain (DUF2201)
 pf:DUF2884 (1)Protein of unknown function (DUF2884)
 pf:DUF2990 (2)Protein of unknown function (DUF2990)
 pf:DUF4056 (1)Protein of unknown function (DUF4056)
 pf:DUF4351 (1)Domain of unknown function (DUF4351)
 pf:DUF447_C (2)
 pf:DUF4810 (1)Domain of unknown function (DUF4810)
 pf:DUF5005 (2)Domain of unknown function (DUF5005)
 pf:DUF6120 (7)
 pf:DUF6829 (1)
 pf:DprA_N (2)
 pf:E3_UFM1_ligase (1)
 pf:EF-hand_1 (2)EF hand
 pf:EF-hand_5 (1)EF hand
 pf:EF-hand_6 (2)EF-hand domain
 pf:EF-hand_8 (2)EF-hand domain pair
 pf:Elongin_A (1)RNA polymerase II transcription factor SIII (Elongin) subunit A
 pf:GAD-like (1)GAD-like domain
 pf:GAF (1)GAF domain
 pf:GAF_2 (1)GAF domain
 pf:GCS (1)Glutamate-cysteine ligase
 pf:HAAS (1)
 pf:HAMP (1)HAMP domain
 pf:HATPase_c (1)Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
 pf:HHA (1)Haemolysin expression modulating protein
 pf:HisKA (1)His Kinase A (phospho-acceptor) domain
 pf:Homeobox_KN (5)Homeobox KN domain
 pf:Homeodomain (5)
 pf:Inhibitor_I48 (1)Peptidase inhibitor clitocypin
 pf:Isd_H_B_linker (1)
 pf:Kinesin (1)Kinesin motor domain
 pf:LRR_3 (1)Leucine Rich Repeat
 pf:LRR_4 (4)Leucine Rich repeats (2 copies)
 pf:LRR_8 (6)Leucine rich repeat
 pf:Lipoprotein_3 (3)Lipoprotein
 pf:Lyase_1 (2)Lyase
 pf:MSSS (1)
 pf:Microtub_bd (1)Microtubule binding
 pf:MqsA_antitoxin (1)Antitoxin component of bacterial toxin-antitoxin system, MqsA
 pf:MutS_V (1)MutS domain V
 pf:NB-ARC (1)NB-ARC domain
 pf:Nop14 (1)Nop14-like family
 pf:Nup84_Nup100 (1)Nuclear pore protein 84 / 107
 pf:PMC2NT (1)PMC2NT (NUC016) domain
 pf:PdtaS_GAF (1)
 pf:PspB (1)Phage shock protein B
 pf:Ribosomal_L28 (1)Ribosomal L28 family
 pf:Ribosomal_L29 (1)Ribosomal L29 protein
 pf:SCHIP-1 (5)Schwannomin-interacting protein 1
 pf:S_100 (2)S-100/ICaBP type calcium binding domain
 pf:Senescence (1)Senescence-associated protein
 pf:Sina_RING (1)
 pf:Smr (1)Smr domain
 pf:SpoU_sub_bind (1)RNA 2'-O ribose methyltransferase substrate binding
 pf:TAF6_C (1)TAF6 C-terminal HEAT repeat domain
 pf:TIR (1)TIR domain
 pf:TIR_2 (1)TIR domain
 pf:TPR_19 (1)Tetratricopeptide repeat
 pf:XAP5 (2)XAP5, circadian clock regulator
 pf:YqgQ-like (1)
 pf:cNMP_binding (1)Cyclic nucleotide-binding domain
 pf:sCache_3_2 (1)Single cache domain 3
 pf:tRNA-synt_1c_C (1)tRNA synthetases class I (E and Q), anti-codon binding domain
 pf:zf-B_box (1)B-box zinc finger
 pf:zf-C3HC4 (1)Zinc finger, C3HC4 type (RING finger)
 pf:zf-C3HC4_2 (1)Zinc finger, C3HC4 type (RING finger)
 pf:zf-C3HC4_3 (1)Zinc finger, C3HC4 type (RING finger)
 pf:zf-C3HC4_4 (1)zinc finger of C3HC4-type, RING
 pf:zf-Di19 (1)Drought induced 19 protein (Di19), zinc-binding
 pf:zf-H2C2_2 (1)Zinc-finger double domain
 pf:zf-RING_10 (1)zinc RING finger of MSL2
 pf:zf-RING_2 (1)Ring finger domain
 pf:zf-RING_5 (1)zinc-RING finger domain
 pf:zf-RING_6 (1)zf-RING of BARD1-type protein
 pf:zf-RING_UBOX (1)RING-type zinc-finger
 pf:zf-TFIIB (1)Transcription factor zinc-finger

alca:ASALC70_02335 pf:Amidase

anu:117707603 pf:S_100 pf:EF-hand_8 pf:EF-hand_5 pf:EF-hand_1 pf:EF-hand_6

apln:108735449 pf:XAP5

ater:MW290_22315 pf:sCache_3_2 pf:GAF_2 pf:PdtaS_GAF pf:GAF pf:HAMP pf:HisKA pf:PMC2NT pf:HATPase_c

csab:103245146 pf:zf-C3HC4_3 pf:zf-RING_10 pf:zf-RING_6 pf:zf-C3HC4_4 pf:zf-RING_UBOX pf:zf-C3HC4 pf:zf-C3HC4_2 pf:zf-RING_2 pf:zf-RING_5 pf:Sina_RING pf:Nop14 pf:zf-Di19 pf:zf-H2C2_2 pf:zf-B_box

cset:123307838 pf:XAP5

dsm:124408190 pf:SCHIP-1 pf:Homeodomain pf:Homeobox_KN

ges:VT84_24600 pf:DUF4810

hsn:DV733_06335 pf:DNA_primase_lrg

htu:Htur_0786 pf:Lyase_1 pf:DUF5005 pf:ASL_C

lmir:NCTC12852_00651 pf:DDE_Tnp_ISL3 pf:SpoU_sub_bind pf:Bac_rhamnosid6H

maro:MarbSA_04870 pf:DNA_primase_lrg pf:Senescence

mcub:MCBB_0971 pf:DNA_primase_lrg

meb:Abm4_0645 pf:DNA_primase_lrg

meis:PXD04_11150 pf:DNA_primase_lrg

mel:Metbo_1346 pf:DNA_primase_lrg pf:Aft1_OSA pf:GAD-like

meme:HYG87_09805 pf:CodY pf:DNA_primase_lrg

metb:AW729_06790 pf:DNA_primase_lrg

metc:MTCT_0509 pf:DNA_primase_lrg

mete:tca_00554 pf:DNA_primase_lrg

meth:MBMB1_1075 pf:DNA_primase_lrg pf:Aft1_OSA

metj:FZP68_04990 pf:DNA_primase_lrg

metk:FVF72_08635 pf:DNA_primase_lrg

metn:BK008_10540 pf:DNA_primase_lrg pf:Aft1_OSA

meto:CIT02_02175 pf:DNA_primase_lrg pf:Aft1_OSA

mett:CIT01_09425 pf:Inhibitor_I48 pf:DNA_primase_lrg

metv:K4897_00790 pf:DNA_primase_lrg pf:DUF447_C

metz:METMT2_0855 pf:Ribosomal_L28 pf:PspB pf:Nup84_Nup100 pf:DNA_primase_lrg

mew:MSWAN_0914 pf:DNA_primase_lrg

meye:TL18_05410 pf:E3_UFM1_ligase pf:DNA_primase_lrg

mfc:BRM9_1279 pf:DNA_primase_lrg pf:Aft1_OSA

mfeg:GCM10025860_19880 pf:YqgQ-like pf:DNA_primase_lrg pf:Aft1_OSA

mfi:DSM1535_1963 pf:DNA_primase_lrg pf:Aft1_OSA

mfv:Mfer_0605 pf:DNA_primase_lrg

mka:MK1394 pf:TAF6_C pf:zf-TFIIB pf:DNA_primase_lrg

mmg:MTBMA_c09660 pf:DNA_primase_lrg

mmil:sm9_1002 pf:DNA_primase_lrg

mol:YLM1_0525 pf:DNA_primase_lrg pf:DUF4056

mpah:110320838 pf:S_100 pf:EF-hand_8 pf:EF-hand_1 pf:EF-hand_6

mru:mru_0969 pf:DNA_primase_lrg

msi:Msm_0073 pf:DNA_primase_lrg pf:DUF447_C

mst:Msp_0084 pf:DNA_primase_lrg

msub:BK009_02815 pf:DNA_primase_lrg pf:Aft1_OSA

msyl:126582085 pf:TIR pf:TIR_2 pf:NB-ARC pf:LRR_3 pf:LRR_8 pf:LRR_8 pf:LRR_4 pf:LRR_8 pf:LRR_4 pf:LRR_4 pf:LRR_8 pf:LRR_8 pf:LRR_8 pf:LRR_4

mtee:MTTB_10110 pf:DNA_primase_lrg

mth:MTH_586 pf:DNA_primase_lrg

mthm:FZP57_04540 pf:DNA_primase_lrg


mwo:MWSIV6_0951 pf:DNA_primase_lrg

mym:A176_002813 pf:TPR_19 pf:cNMP_binding

mzi:HWN40_10675 pf:DNA_primase_lrg

nara:QQ977_14720 pf:Lyase_1 pf:DUF5005 pf:ASL_C

nfb:124179737 pf:SCHIP-1 pf:Homeodomain pf:Homeobox_KN

nfn:NFRAN_2762 pf:DNA_primase_lrg

nlo:107227283 pf:SCHIP-1 pf:Homeodomain pf:Homeobox_KN

npt:124216329 pf:SCHIP-1 pf:Homeodomain pf:Homeobox_KN

nvg:124302304 pf:SCHIP-1 pf:Homeodomain pf:Homeobox_KN

pab:PAB2235 pf:DUF6120 pf:DNA_primase_lrg

pfi:PFC_07650 pf:DUF6120 pf:DprA_N pf:DNA_primase_lrg

pfu:PF0111 pf:DUF6120 pf:DprA_N pf:DNA_primase_lrg

pho:PH0196 pf:DUF6120 pf:DNA_primase_lrg

ppac:PAP_05705 pf:DNA_primase_lrg

pph:Ppha_2225 pf:MutS_V pf:Borrelia_P83 pf:ACR_tran pf:MqsA_antitoxin pf:MSSS pf:Smr



pya:PYCH_16510 pf:DNA_primase_lrg

pyc:TQ32_00375 pf:DUF6120 pf:DNA_primase_lrg

pyn:PNA2_0713 pf:DUF6120 pf:DNA_primase_lrg

pys:Py04_0264 pf:DUF4351 pf:DUF2201 pf:DNA_primase_lrg

salp:111950400 pf:Microtub_bd pf:Kinesin

tba:TERMP_01672 pf:DNA_primase_lrg

tbs:A3L01_09985 pf:DNA_primase_lrg

tce:A3L02_08040 pf:DNA_primase_lrg

tch:CHITON_0328 pf:DUF6120 pf:DNA_primase_lrg

tcq:TIRI35C_0105 pf:DNA_primase_lrg

teu:TEU_03255 pf:DNA_primase_lrg

tga:TGAM_0344 pf:DNA_primase_lrg

tgg:A3K92_07525 pf:DNA_primase_lrg

tgy:X802_05545 pf:DNA_primase_lrg pf:Isd_H_B_linker pf:DUF6829 pf:HHA

tha:TAM4_1114 pf:DNA_primase_lrg

the:GQS_06360 pf:DNA_primase_lrg

thei:K1720_01650 pf:DNA_primase_lrg

them:FPV09_08020 pf:DNA_primase_lrg

thh:CDI07_09820 pf:DNA_primase_lrg

thm:CL1_0903 pf:DNA_primase_lrg

ths:TES1_1675 pf:DNA_primase_lrg

thv:ADU37_CDS18790 pf:DNA_primase_lrg pf:Lipoprotein_3

thy:A3L12_02580 pf:DNA_primase_lrg

tic:FH039_01480 pf:DNA_primase_lrg pf:Elongin_A

tko:TK1790 pf:DNA_primase_lrg pf:DUF2990

tlt:OCC_12911 pf:DNA_primase_lrg pf:Lipoprotein_3

tnu:BD01_1431 pf:HAAS pf:DNA_primase_lrg pf:Ribosomal_L29

ton:TON_1778 pf:DNA_primase_lrg pf:DUF2884

tpaf:A3L08_02730 pf:DNA_primase_lrg

tpep:A0127_06215 pf:DNA_primase_lrg pf:DUF2990

tpie:A7C91_03195 pf:tRNA-synt_1c_C pf:DNA_primase_lrg

tprf:A3L09_10355 pf:DNA_primase_lrg

trl:A3L10_09310 pf:DNA_primase_lrg

tsi:TSIB_1767 pf:GCS pf:DNA_primase_lrg pf:Lipoprotein_3

tsl:A3L11_03275 pf:DNA_primase_lrg

ttd:A3L14_00865 pf:DNA_primase_lrg