Search common motifs in selected sequences


  
Motifs : pf:AAAATPase family associated with various cellular activities (AAA)
 pf:AAA_16AAA ATPase domain
 pf:AAA_17AAA domain
 pf:AAA_18AAA domain
 pf:AAA_21AAA domain, putative AbiEii toxin, Type IV TA system
 pf:AAA_22AAA domain
 pf:AAA_24AAA domain
 pf:AAA_25AAA domain
 pf:AAA_29P-loop containing region of AAA domain
 pf:AAA_33AAA domain
 pf:AAA_7P-loop containing dynein motor region D3
 pf:ABC_ATPasePredicted ATPase of the ABC class
 pf:ABC_tranABC transporter
 pf:ATP-synt_abATP synthase alpha/beta family, nucleotide-binding domain
 pf:ATPaseKaiC
 pf:DUF2001Phage tail tube protein
 pf:DUF2666Protein of unknown function (DUF2666)
 pf:DUF3987Protein of unknown function (DUF3987)
 pf:DUF5906
 pf:DUF87Domain of unknown function DUF87
 pf:FtsK_SpoIIIEFtsK/SpoIIIE family
 pf:GMAPGalanin message associated peptide (GMAP)
 pf:MRP-L51Mitochondrial ribosomal subunit
 pf:Myosin_headMyosin head (motor domain)
 pf:NACHTNACHT domain
 pf:PPV_E1_CPapillomavirus helicase
 pf:PRKPhosphoribulokinase / Uridine kinase family
 pf:RNA_helicaseRNA helicase
 pf:ResIIIType III restriction enzyme, res subunit
 pf:Rsbr_NRsbr N terminal
 pf:RsgA_GTPase
 pf:SLFN-g3_helicase
 pf:SMC_NRecF/RecN/SMC N terminal domain
 pf:Sigma54_activatSigma-54 interaction domain
 pf:TAXi_CXylanase inhibitor C-terminal
 pf:TniBBacterial TniB protein
 pf:nSTAND1
 pf:nSTAND3
 pf:oligo_HPYOligopeptide/dipeptide transporter, C-terminal region

alkl:MM271_03470 pf:ABC_tran pf:nSTAND3 pf:AAA_22 pf:AAA_16 pf:SMC_N pf:AAA_29 pf:AAA_21 pf:oligo_HPY

and:GRQ40_15980 pf:AAA_7 pf:ABC_tran pf:AAA_29 pf:nSTAND3 pf:nSTAND1 pf:AAA_22 pf:AAA_16 pf:PPV_E1_C pf:SMC_N pf:FtsK_SpoIIIE pf:DUF87 pf:ABC_ATPase pf:oligo_HPY

bbe:BBR47_28260 pf:ABC_tran pf:AAA_29 pf:AAA_7 pf:nSTAND1 pf:Myosin_head pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:AAA_17 pf:ABC_ATPase pf:oligo_HPY

bfm:BP422_09305 pf:ABC_tran pf:AAA_29 pf:AAA_7 pf:nSTAND1 pf:Myosin_head pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:AAA_17 pf:ABC_ATPase pf:oligo_HPY

bha:BH2077 pf:AAA_29 pf:ABC_tran pf:FtsK_SpoIIIE pf:nSTAND3 pf:nSTAND1 pf:AAA_7 pf:AAA_22 pf:SMC_N pf:PPV_E1_C pf:AAA_16 pf:DUF87 pf:oligo_HPY

bson:S101395_03007 pf:ABC_tran pf:AAA_29 pf:FtsK_SpoIIIE pf:nSTAND3 pf:AAA_22 pf:AAA_16 pf:SMC_N pf:TniB pf:AAA_21 pf:oligo_HPY

bwh:A9C19_14400 pf:ABC_tran pf:AAA_29 pf:nSTAND1 pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:AAA_18 pf:ABC_ATPase pf:oligo_HPY

cspg:LS684_01110 pf:ABC_tran pf:ATP-synt_ab pf:nSTAND3 pf:AAA_29 pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:ABC_ATPase pf:Rsbr_N pf:oligo_HPY

gym:GYMC10_2841 pf:ABC_tran pf:AAA_29 pf:nSTAND3 pf:DUF3987 pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:AAA_21 pf:oligo_HPY

lmac:I6G82_11200 pf:FtsK_SpoIIIE pf:ATP-synt_ab pf:ABC_tran pf:AAA_29 pf:nSTAND3 pf:nSTAND1 pf:AAA_22 pf:AAA_16 pf:SMC_N pf:SLFN-g3_helicase pf:Sigma54_activat pf:DUF87 pf:AAA_21 pf:oligo_HPY

meku:HUW50_21710 pf:ABC_tran pf:AAA_29 pf:nSTAND3 pf:nSTAND1 pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:ABC_ATPase pf:oligo_HPY

pbac:HUB98_11400 pf:ABC_tran pf:AAA_29 pf:nSTAND1 pf:AAA_16 pf:AAA_7 pf:nSTAND3 pf:AAA_22 pf:SMC_N pf:FtsK_SpoIIIE pf:DUF87 pf:AAA_21 pf:ABC_ATPase pf:oligo_HPY

plw:D5F53_15580 pf:ABC_tran pf:AAA_29 pf:nSTAND3 pf:DUF3987 pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:AAA_21 pf:oligo_HPY

ppab:KET34_28265 pf:ABC_tran pf:AAA_29 pf:AAA_22 pf:AAA_16 pf:FtsK_SpoIIIE pf:SMC_N pf:DUF87 pf:TAXi_C pf:AAA_21 pf:oligo_HPY

pui:PUW25_11760 pf:AAA_29 pf:ABC_tran pf:nSTAND3 pf:ATPase pf:AAA_22 pf:AAA_16 pf:SMC_N pf:NACHT pf:ResIII pf:DUF87 pf:AAA_21 pf:Rsbr_N pf:oligo_HPY

saa:SAUSA300_2408 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sab:SAB2347c pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sac:SACOL2473 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sad:SAAV_2530 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sae:NWMN_2361 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sagq:EP23_10540 pf:ABC_tran pf:nSTAND3 pf:AAA_29 pf:nSTAND1 pf:RsgA_GTPase pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:DUF5906 pf:MRP-L51 pf:AAA_21 pf:oligo_HPY

sah:SaurJH1_2540 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saj:SaurJH9_2491 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sam:MW2388 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:PRK pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sams:NI36_12250 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sao:SAOUHSC_02764 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sar:SAR2551 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sas:SAS2355 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:PRK pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sau:SA2252 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saua:SAAG_00290 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saub:C248_2514 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauc:CA347_2543 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saud:CH52_06665 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saue:RSAU_002302 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauf:X998_2448 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saug:SA268_2369 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saui:AZ30_12940 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauj:SAI2T2_1018350 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauk:SAI3T3_1018340 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saum:BN843_25040 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saun:SAKOR_02448 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauq:SAI4T8_1018350 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saur:SABB_01213 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saus:SA40_2212 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saut:SAI1T1_2018340 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauu:SA957_2296 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauv:SAI7S6_1018340 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauw:SAI5S5_1018280 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saux:SAI6T6_1018280 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauy:SAI8T7_1018320 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sauz:SAZ172_2567 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sav:SAV2464 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

saw:SAHV_2448 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sax:USA300HOU_2455 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

scar:DWB96_00470 pf:ABC_tran pf:SMC_N pf:AAA_33 pf:AAA_22 pf:AAA_21 pf:oligo_HPY

schr:DWB92_11700 pf:ABC_tran pf:nSTAND1 pf:nSTAND3 pf:AAA_29 pf:AAA_16 pf:AAA_22 pf:SMC_N pf:DUF87 pf:DUF5906 pf:AAA_21 pf:oligo_HPY

sdo:SD1155_03755 pf:ABC_tran pf:AAA_29 pf:AAA_16 pf:SMC_N pf:AAA_22 pf:AAA_21 pf:oligo_HPY

sdp:NCTC12225_02590 pf:ABC_tran pf:AAA_29 pf:AAA_25 pf:RsgA_GTPase pf:nSTAND3 pf:AAA_16 pf:AAA_22 pf:SMC_N pf:AAA_24 pf:DUF87 pf:AAA_21 pf:oligo_HPY

sdt:SPSE_2395 pf:ABC_tran pf:AAA_29 pf:AAA_25 pf:nSTAND3 pf:AAA_16 pf:AAA_22 pf:SMC_N pf:AAA_24 pf:DUF87 pf:AAA_21 pf:ABC_ATPase pf:oligo_HPY

seda:MNY58_00485 pf:ABC_tran pf:ATP-synt_ab pf:AAA_16 pf:SMC_N pf:AAA_22 pf:AAA_21 pf:oligo_HPY

sep:SE_0209 pf:ABC_tran pf:ATP-synt_ab pf:AAA_29 pf:DUF87 pf:SMC_N pf:AAA_22 pf:oligo_HPY

sepp:SEB_00135 pf:ABC_tran pf:ATP-synt_ab pf:AAA_29 pf:DUF87 pf:SMC_N pf:AAA_22 pf:oligo_HPY

seps:DP17_1257 pf:ABC_tran pf:ATP-synt_ab pf:AAA_29 pf:DUF87 pf:SMC_N pf:AAA_22 pf:oligo_HPY

ser:SERP2369 pf:ABC_tran pf:ATP-synt_ab pf:AAA_29 pf:DUF87 pf:SMC_N pf:AAA_22 pf:oligo_HPY

sff:FOB90_08260 pf:ABC_tran pf:AAA_29 pf:nSTAND3 pf:nSTAND1 pf:AAA_16 pf:RsgA_GTPase pf:SMC_N pf:AAA_22 pf:DUF87 pf:AAA_18 pf:AAA_21 pf:oligo_HPY

sfq:C7J90_03795 pf:nSTAND1 pf:ABC_tran pf:ATP-synt_ab pf:AAA_29 pf:SMC_N pf:AAA_22 pf:AAA pf:AAA_21 pf:DUF2666 pf:oligo_HPY

shu:SHYC_11625 pf:ABC_tran pf:nSTAND3 pf:AAA_29 pf:nSTAND1 pf:RsgA_GTPase pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:DUF5906 pf:MRP-L51 pf:AAA_21 pf:oligo_HPY

slg:SLGD_00151 pf:ABC_tran pf:ATP-synt_ab pf:AAA_29 pf:DUF87 pf:SMC_N pf:AAA_22 pf:RNA_helicase pf:AAA_21 pf:oligo_HPY

sllo:ISP08_00470 pf:ABC_tran pf:AAA_29 pf:nSTAND1 pf:AAA_16 pf:SMC_N pf:AAA_22 pf:PRK pf:DUF87 pf:oligo_HPY

slms:MM221_10335 pf:ABC_tran pf:FtsK_SpoIIIE pf:AAA_29 pf:nSTAND3 pf:nSTAND1 pf:AAA_22 pf:AAA_16 pf:SMC_N pf:DUF87 pf:AAA_18 pf:AAA_17 pf:AAA_21 pf:ABC_ATPase pf:oligo_HPY

sln:SLUG_01490 pf:ABC_tran pf:ATP-synt_ab pf:AAA_29 pf:DUF87 pf:SMC_N pf:AAA_22 pf:RNA_helicase pf:AAA_21 pf:oligo_HPY

slz:B5P37_06455 pf:ABC_tran pf:AAA_7 pf:RsgA_GTPase pf:AAA_29 pf:AAA_16 pf:AAA_22 pf:SMC_N pf:AAA_21 pf:ABC_ATPase pf:oligo_HPY

spas:STP1_1300 pf:ABC_tran pf:AAA_29 pf:AAA_16 pf:SMC_N pf:AAA_22 pf:AAA_21 pf:oligo_HPY

spsd:JMB28_00765 pf:ABC_tran pf:ATP-synt_ab pf:AAA_29 pf:SMC_N pf:AAA_22 pf:DUF2001 pf:AAA_21 pf:oligo_HPY

srai:LN051_10955 pf:ABC_tran pf:RsgA_GTPase pf:nSTAND1 pf:AAA_29 pf:nSTAND3 pf:AAA_22 pf:SMC_N pf:AAA_16 pf:DUF87 pf:DUF5906 pf:AAA_21 pf:oligo_HPY

srot:ML435_11855 pf:ABC_tran pf:ATP-synt_ab pf:DUF87 pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

ssch:LH95_11130 pf:ABC_tran pf:AAA_29 pf:nSTAND3 pf:AAA_16 pf:RsgA_GTPase pf:SMC_N pf:AAA_22 pf:DUF87 pf:AAA_18 pf:AAA_21 pf:oligo_HPY

sscz:RN70_11880 pf:ABC_tran pf:AAA_29 pf:nSTAND3 pf:AAA_16 pf:RsgA_GTPase pf:SMC_N pf:AAA_22 pf:DUF87 pf:AAA_18 pf:AAA_21 pf:oligo_HPY

ssd:SPSINT_0082 pf:ABC_tran pf:AAA_29 pf:AAA_25 pf:nSTAND3 pf:AAA_16 pf:AAA_22 pf:SMC_N pf:AAA_24 pf:DUF87 pf:AAA_21 pf:ABC_ATPase pf:oligo_HPY

ssh:NCTC13712_02416 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sste:SAMEA4384403_1094 pf:ABC_tran pf:SMC_N pf:DUF87 pf:AAA_29 pf:AAA_22 pf:AAA_21 pf:AAA_21 pf:oligo_HPY

suc:ECTR2_2321 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sud:ST398NM01_2514 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sue:SAOV_2514c pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

suf:SARLGA251_22440 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sug:SAPIG2514 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

suh:SAMSHR1132_22890 pf:ABC_tran pf:ATP-synt_ab pf:DUF87 pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

suj:SAA6159_02361 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

suk:SAA6008_02505 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

suq:HMPREF0772_10725 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sut:SAT0131_02663 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

suu:M013TW_2424 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

suv:SAVC_11190 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:oligo_HPY

suw:SATW20_25920 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

sux:SAEMRSA15_23620 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

suy:SA2981_2401 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

suz:MS7_2477 pf:ABC_tran pf:ATP-synt_ab pf:SMC_N pf:DUF87 pf:AAA_22 pf:AAA_21 pf:GMAP pf:oligo_HPY

swa:A284_00440 pf:AAA_16 pf:ABC_tran pf:AAA_29 pf:SMC_N pf:AAA_22 pf:oligo_HPY

sxl:SXYLSMQ121_0073 pf:ABC_tran pf:AAA_29 pf:nSTAND1 pf:ATP-synt_ab pf:AAA_16 pf:SMC_N pf:AAA_22 pf:DUF87 pf:DUF2001 pf:oligo_HPY

sxo:SXYL_00074 pf:ABC_tran pf:AAA_29 pf:nSTAND1 pf:ATP-synt_ab pf:AAA_16 pf:SMC_N pf:AAA_22 pf:DUF2001 pf:oligo_HPY

sxy:BE24_11735 pf:ABC_tran pf:AAA_29 pf:nSTAND1 pf:AAA_16 pf:SMC_N pf:AAA_22 pf:oligo_HPY