Search common motifs in selected sequences


  
Motifs : pf:Arabinose_bdArabinose-binding domain of AraC transcription regulator, N-term
 pf:CCDC85CCDC85 family
 pf:CMS1U3-containing 90S pre-ribosomal complex subunit
 pf:CggR_N
 pf:Couple_hipAHipA N-terminal domain
 pf:DUF1043Protein of unknown function (DUF1043)
 pf:DciA
 pf:DnaG_DnaB_bindDNA primase DnaG DnaB-binding
 pf:GASGrowth-arrest specific micro-tubule binding
 pf:HTH_1Bacterial regulatory helix-turn-helix protein, lysR family
 pf:HTH_11HTH domain
 pf:HTH_18Helix-turn-helix domain
 pf:HTH_20Helix-turn-helix domain
 pf:HTH_23Homeodomain-like domain
 pf:HTH_24Winged helix-turn-helix DNA-binding
 pf:HTH_28Helix-turn-helix domain
 pf:HTH_29Winged helix-turn helix
 pf:HTH_30PucR C-terminal helix-turn-helix domain
 pf:HTH_33Winged helix-turn helix
 pf:HTH_36Helix-turn-helix domain
 pf:HTH_38Helix-turn-helix domain
 pf:HTH_50
 pf:HTH_8Bacterial regulatory protein, Fis family
 pf:HTH_AraCBacterial regulatory helix-turn-helix proteins, AraC family
 pf:HTH_AsnC-typeAsnC-type helix-turn-helix domain
 pf:HTH_DeoRDeoR-like helix-turn-helix domain
 pf:HTH_MgaM protein trans-acting positive regulator (MGA) HTH domain
 pf:HTH_Tnp_ISL3Helix-turn-helix domain of transposase family ISL3
 pf:Phage_integrasePhage integrase family
 pf:Sigma70_r3Sigma-70 region 3
 pf:Sigma70_r4_2Sigma-70, region 4
 pf:SurA_NSurA N-terminal domain
 pf:TCAD7
 pf:TetR_NBacterial regulatory proteins, tetR family
 pf:TnsDTn7-like transposition protein D
 pf:UreFUreF
 pf:XylR_NActivator of aromatic catabolism

amah:DLM_3884 pf:Arabinose_bd pf:HTH_DeoR pf:HTH_18 pf:HTH_23 pf:HTH_AraC

aqs:DKK66_08015 pf:Arabinose_bd pf:HTH_DeoR pf:HTH_18 pf:HTH_AraC

bac:BamMC406_5855 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_18 pf:HTH_23 pf:HTH_28 pf:HTH_24 pf:HTH_AraC

baen:L3V59_39180 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:HTH_8 pf:SurA_N pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

bam:Bamb_6093 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_18 pf:HTH_23 pf:HTH_28 pf:HTH_24 pf:HTH_AraC

bari:NLX30_35420 pf:Arabinose_bd pf:TCAD7 pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_28 pf:HTH_23 pf:HTH_AraC

bced:DM42_6609 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:HTH_30 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_28 pf:HTH_AraC pf:TetR_N

bcen:DM39_6540 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_AraC

bceo:I35_7133 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:HTH_30 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_28 pf:HTH_AraC pf:TetR_N

bcep:APZ15_33740 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_30 pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

bch:Bcen2424_6097 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_28 pf:HTH_AraC pf:TetR_N

bcj:BCAS0135 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:HTH_30 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_28 pf:HTH_AraC pf:TetR_N

bcm:Bcenmc03_6580 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_28 pf:HTH_AraC pf:TetR_N

bcon:NL30_34240 pf:Arabinose_bd pf:TCAD7 pf:HTH_Tnp_ISL3 pf:HTH_8 pf:HTH_30 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

bfn:OI25_3610 pf:Arabinose_bd pf:HTH_50 pf:HTH_18 pf:HTH_23 pf:HTH_AraC pf:HTH_AsnC-type pf:TetR_N pf:HTH_24

bmec:WJ16_19415 pf:Arabinose_bd pf:TCAD7 pf:SurA_N pf:HTH_Tnp_ISL3 pf:HTH_50 pf:HTH_8 pf:HTH_30 pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

bmj:BMULJ_05510 pf:Arabinose_bd pf:UreF pf:HTH_8 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

bmk:DM80_6466 pf:Arabinose_bd pf:UreF pf:HTH_8 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

bmu:Bmul_6017 pf:Arabinose_bd pf:UreF pf:HTH_8 pf:SurA_N pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

bmul:NP80_5224 pf:Arabinose_bd pf:HTH_8 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_AraC

bpsl:WS57_17620 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_AraC

bpyr:ABD05_34110 pf:Arabinose_bd pf:HTH_8 pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_AraC

bsem:WJ12_19465 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_28 pf:HTH_AraC

bstg:WT74_04520 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:HTH_50 pf:SurA_N pf:HTH_30 pf:HTH_18 pf:HTH_23 pf:HTH_AraC

bstl:BBJ41_33755 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:HTH_8 pf:SurA_N pf:HTH_18 pf:HTH_28 pf:HTH_23 pf:HTH_AraC

buk:MYA_5988 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

bur:Bcep18194_C7549 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:HTH_8 pf:HTH_30 pf:SurA_N pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

burk:DM992_34835 pf:Arabinose_bd pf:TCAD7 pf:HTH_Tnp_ISL3 pf:HTH_8 pf:SurA_N pf:HTH_30 pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_28 pf:HTH_AraC

bve:AK36_6027 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

bvi:Bcep1808_6592 pf:Arabinose_bd pf:HTH_Tnp_ISL3 pf:SurA_N pf:HTH_18 pf:HTH_23 pf:HTH_24 pf:HTH_AraC

harr:HV822_09880 pf:Arabinose_bd pf:Sigma70_r3 pf:HTH_20 pf:HTH_11 pf:HTH_18 pf:HTH_23 pf:Sigma70_r4_2 pf:HTH_AraC

hpeg:EAO82_07195 pf:Arabinose_bd pf:HTH_20 pf:HTH_11 pf:HTH_36 pf:HTH_DeoR pf:HTH_28 pf:HTH_23 pf:HTH_18 pf:Sigma70_r4_2 pf:HTH_AsnC-type pf:HTH_AraC

myco:MPB2EB_0942 pf:Arabinose_bd pf:HTH_30 pf:HTH_1 pf:HTH_8 pf:HTH_18 pf:HTH_AraC pf:HTH_AsnC-type

palc:A0T30_03135 pf:Arabinose_bd pf:HTH_23 pf:HTH_38 pf:HTH_1 pf:HTH_28 pf:HTH_11 pf:HTH_Mga pf:HTH_18 pf:HTH_AraC

palk:PSAKL28_52050 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_23

pasg:KSS96_11155 pf:Arabinose_bd pf:HTH_18 pf:HTH_AraC

pasi:LG197_04545 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

past:N015_21080 pf:Arabinose_bd pf:Sigma70_r3 pf:HTH_Tnp_ISL3 pf:HTH_38 pf:HTH_20 pf:HTH_11 pf:HTH_28 pf:HTH_36 pf:HTH_23 pf:SurA_N pf:HTH_29 pf:HTH_18 pf:HTH_AraC

paze:KSS91_00355 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

pbz:GN234_17670 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_AraC

pcaf:DSC91_007479 pf:Arabinose_bd pf:HTH_50 pf:HTH_18 pf:HTH_23 pf:HTH_AraC pf:HTH_AsnC-type pf:TetR_N pf:HTH_24

pcam:HNE05_19125 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_11 pf:HTH_20 pf:HTH_38 pf:HTH_DeoR pf:HTH_23 pf:HTH_18 pf:HTH_AraC

pcav:D3880_01110 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_23 pf:HTH_30 pf:HTH_1 pf:HTH_18 pf:HTH_AraC

pcg:AXG94_14975 pf:Arabinose_bd pf:HTH_36 pf:SurA_N pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pch:EY04_29965 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pchp:C4K32_6214 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pcp:JM49_00650 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pcq:PcP3B5_59480 pf:Arabinose_bd pf:CCDC85 pf:HTH_23 pf:HTH_38 pf:HTH_18 pf:HTH_AraC

pcuc:PSH97_27980 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pcz:PCL1606_00780 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pden:F1C79_22720 pf:Arabinose_bd pf:HTH_38 pf:HTH_23 pf:HTH_Tnp_ISL3 pf:HTH_AraC pf:HTH_18 pf:HTH_AraC

pdr:H681_23600 pf:Arabinose_bd pf:GAS pf:DUF1043 pf:HTH_23 pf:HTH_38 pf:HTH_Tnp_ISL3 pf:HTH_AraC pf:HTH_18 pf:HTH_AraC

pfb:VO64_2960 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_33 pf:HTH_AraC

pfk:PFAS1_11495 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_20 pf:HTH_AraC

pfv:Psefu_1659 pf:Arabinose_bd pf:HTH_18 pf:HTH_AraC

phf:NLY38_00590 pf:Arabinose_bd pf:CggR_N pf:HTH_36 pf:HTH_20 pf:HTH_Mga pf:HTH_11 pf:HTH_18 pf:HTH_23 pf:HTH_AraC

pix:RIN61_11560 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pju:L1P09_24925 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

pkc:PKB_5567 pf:Arabinose_bd pf:CCDC85 pf:HTH_20 pf:HTH_38 pf:HTH_23 pf:HTH_Tnp_ISL3 pf:HTH_28 pf:HTH_AraC pf:HTH_18 pf:HTH_AraC

pkh:JLK41_00455 pf:Arabinose_bd pf:HTH_30 pf:HTH_36 pf:HTH_20 pf:HTH_11 pf:HTH_Mga pf:HTH_18 pf:HTH_23

plal:FXN65_01550 pf:Arabinose_bd pf:HTH_29 pf:HTH_Mga pf:HTH_18 pf:HTH_11 pf:HTH_AraC

plq:AA042_10710 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_29 pf:HTH_Mga pf:HTH_33 pf:HTH_AraC

pman:OU5_3535 pf:Arabinose_bd pf:HTH_11 pf:HTH_18 pf:HTH_AraC

pmao:PMYSY11_4410 pf:Arabinose_bd pf:Couple_hipA pf:TnsD pf:HTH_36 pf:HTH_29 pf:HTH_30 pf:HTH_Mga pf:HTH_11 pf:HTH_20 pf:HTH_18 pf:XylR_N pf:HTH_23 pf:HTH_29 pf:HTH_AraC pf:Sigma70_r4_2

pmk:MDS_0120 pf:Arabinose_bd pf:HTH_36 pf:HTH_20 pf:HTH_Mga pf:HTH_11 pf:HTH_18 pf:HTH_23 pf:HTH_AraC

pmon:X969_25650 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pmot:X970_25285 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

pmud:NCTC8068_05362 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_Mga pf:HTH_AraC

pmui:G4G71_04570 pf:Arabinose_bd pf:GAS pf:HTH_38 pf:HTH_AraC pf:HTH_23 pf:HTH_18 pf:HTH_AraC

pmuy:KSS95_03385 pf:Arabinose_bd pf:HTH_11 pf:HTH_36 pf:HTH_20 pf:HTH_18 pf:HTH_AraC

pmy:Pmen_0122 pf:Arabinose_bd pf:CggR_N pf:HTH_36 pf:HTH_20 pf:HTH_Mga pf:HTH_11 pf:HTH_18 pf:HTH_23 pf:HTH_AraC

pnb:NK667_27885 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_20 pf:HTH_AraC

pnt:G5B91_30815 pf:Arabinose_bd pf:GAS pf:HTH_38 pf:HTH_AraC pf:HTH_23 pf:HTH_18 pf:HTH_AraC

poj:PtoMrB4_03130 pf:Arabinose_bd pf:HTH_11 pf:HTH_38 pf:HTH_23 pf:HTH_29 pf:HTH_18 pf:Sigma70_r4_2 pf:HTH_AraC

pory:EJA05_27775 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_20 pf:HTH_18 pf:HTH_23 pf:HTH_AraC

ppai:E1956_24300 pf:Arabinose_bd pf:DciA pf:Phage_integrase pf:HTH_Tnp_ISL3 pf:HTH_23 pf:SurA_N pf:HTH_8 pf:HTH_AsnC-type pf:HTH_18 pf:HTH_23 pf:HTH_AsnC-type pf:HTH_24 pf:HTH_AraC

ppha:BVH74_03740 pf:Arabinose_bd pf:HTH_20 pf:HTH_11 pf:HTH_18 pf:HTH_AraC

ppj:RK21_04977 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

ppt:PPS_5188 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

ppud:DW66_5759 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

ppuh:B479_26430 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_AraC

ppun:PP4_54000 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

pput:L483_31830 pf:Arabinose_bd pf:DnaG_DnaB_bind pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_23 pf:HTH_AraC

ppw:PputW619_0134 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:SurA_N pf:HTH_20 pf:HTH_18 pf:Sigma70_r4_2 pf:HTH_23 pf:HTH_AraC

pre:PCA10_03230 pf:Arabinose_bd pf:HTH_30 pf:HTH_29 pf:Sigma70_r4_2 pf:HTH_28 pf:HTH_18 pf:HTH_23 pf:HTH_11 pf:HTH_AraC

prhz:CRX69_25890 pf:Arabinose_bd pf:SurA_N pf:HTH_36 pf:HTH_11 pf:HTH_18 pf:HTH_20 pf:HTH_Mga pf:HTH_23 pf:HTH_AraC

psam:HU731_015705 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_AraC

psem:TO66_31185 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pses:PSCI_4472 pf:Arabinose_bd pf:HTH_18 pf:Sigma70_r4_2 pf:HTH_29 pf:HTH_23 pf:HTH_AraC

pset:THL1_281 pf:Arabinose_bd pf:HTH_30 pf:HTH_29 pf:Sigma70_r4_2 pf:HTH_28 pf:HTH_18 pf:HTH_23 pf:HTH_11 pf:HTH_AraC

psih:LOY51_26575 pf:Arabinose_bd pf:HTH_36 pf:HTH_11 pf:HTH_20 pf:HTH_18 pf:HTH_23 pf:HTH_AraC

psk:U771_31320 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_Mga pf:HTH_23 pf:HTH_AraC

psoa:PSm6_23650 pf:Arabinose_bd pf:HTH_23 pf:HTH_30 pf:HTH_29 pf:HTH_1 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

ptae:NCTC10697_04439 pf:CMS1 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_29 pf:HTH_Mga pf:HTH_AraC

ptol:I7845_28585 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

ptrl:OU419_27135 pf:Arabinose_bd pf:GAS pf:DUF1043 pf:HTH_38 pf:HTH_23 pf:HTH_Tnp_ISL3 pf:HTH_18 pf:HTH_AraC

ptrt:HU722_0000490 pf:Arabinose_bd pf:HTH_36 pf:HTH_18

ptw:TUM18999_04700 pf:Arabinose_bd pf:HTH_23 pf:HTH_30 pf:HTH_29 pf:HTH_1 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pvr:PverR02_30995 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_AraC

pvw:HU752_000600 pf:Arabinose_bd pf:HTH_36 pf:HTH_18 pf:HTH_11 pf:HTH_23 pf:HTH_AraC

pym:AK972_6017 pf:Arabinose_bd pf:HTH_36 pf:HTH_Mga pf:HTH_18 pf:HTH_AraC