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Motifs : | pf:AAA | ATPase family associated with various cellular activities (AAA)
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| pf:AAA_14 | AAA domain
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| pf:AAA_16 | AAA ATPase domain
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| pf:AAA_18 | AAA domain
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| pf:AAA_21 | AAA domain, putative AbiEii toxin, Type IV TA system
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| pf:AAA_22 | AAA domain
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| pf:AAA_23 | AAA domain
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| pf:AAA_24 | AAA domain
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| pf:AAA_29 | P-loop containing region of AAA domain
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| pf:ABC1 | ABC1 family
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| pf:ABC_membrane | ABC transporter transmembrane region
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| pf:ABC_tran | ABC transporter
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| pf:ANAPC3 | Anaphase-promoting complex, cyclosome, subunit 3
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| pf:ANAPC4_WD40 | Anaphase-promoting complex subunit 4 WD40 domain
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| pf:APH | Phosphotransferase enzyme family
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| pf:ATP-grasp | ATP-grasp domain
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| pf:ATP-grasp_3 | ATP-grasp domain
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| pf:ATP-synt_ab | ATP synthase alpha/beta family, nucleotide-binding domain
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| pf:ATPase_2 | ATPase domain predominantly from Archaea
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| pf:ATPgrasp_ST | Sugar-transfer associated ATP-grasp
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| pf:Abhydrolase_3 | alpha/beta hydrolase fold
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| pf:Acid_PPase | Acid Phosphatase
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| pf:Alpha-amylase | Alpha amylase, catalytic domain
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| pf:Astacin | Astacin (Peptidase family M12A)
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| pf:BD-FAE | |
| pf:BRE1 | BRE1 E3 ubiquitin ligase
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| pf:Bac_luciferase | Luciferase-like monooxygenase
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| pf:Bac_rhamnosid | Bacterial alpha-L-rhamnosidase
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| pf:BetaGal_ABD2 | |
| pf:Biotin_carb_C | Biotin carboxylase C-terminal domain
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| pf:Biotin_carb_N | Biotin carboxylase, N-terminal domain
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| pf:C-JID | |
| pf:CBM49 | Carbohydrate binding domain CBM49
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| pf:CBM_48 | Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
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| pf:COX2_TM | Cytochrome C oxidase subunit II, transmembrane domain
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| pf:COesterase | Carboxylesterase family
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| pf:CPSase_L_D2 | Carbamoyl-phosphate synthase L chain, ATP binding domain
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| pf:CSTF2_hinge | Hinge domain of cleavage stimulation factor subunit 2
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| pf:CarbopepD_reg_2 | CarboxypepD_reg-like domain
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| pf:CarboxypepD_reg | Carboxypeptidase regulatory-like domain
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| pf:CoiA | Competence protein CoiA-like family
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| pf:DEAD | DEAD/DEAH box helicase
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| pf:DNase_II | Deoxyribonuclease II
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| pf:DO-GTPase2 | |
| pf:DUF1003 | Protein of unknown function (DUF1003)
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| pf:DUF1892 | Protein of unknown function (DUF1892)
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| pf:DUF3856 | Domain of Unknown Function (DUF3856)
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| pf:DUF4058 | Protein of unknown function (DUF4058)
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| pf:DUF4174 | Domain of unknown function (DUF4174)
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| pf:DUF4317 | Domain of unknown function (DUF4317)
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| pf:DUF4497 | Protein of unknown function (DUF4497)
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| pf:DUF4573 | Domain of unknown function (DUF4573)
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| pf:DUF4982 | Domain of unknown function (DUF4982)
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| pf:DUF5113 | Domain of unknown function (DUF5113)
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| pf:DUF5402 | |
| pf:DUF6374 | |
| pf:DUF6429 | |
| pf:DUF6444 | |
| pf:DUF659 | Protein of unknown function (DUF 659)
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| pf:DUF668 | Protein of unknown function (DUF668)
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| pf:DUF808 | Protein of unknown function (DUF808)
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| pf:DUF87 | Domain of unknown function DUF87
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| pf:Dala_Dala_lig_C | D-ala D-ala ligase C-terminus
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| pf:ECSIT_C | C-terminal domain of the ECSIT protein
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| pf:EF-hand_1 | EF hand
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| pf:EF-hand_4 | Cytoskeletal-regulatory complex EF hand
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| pf:EF-hand_7 | EF-hand domain pair
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| pf:ETX_MTX2 | Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2
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| pf:FAM193_C | FAM193 family C-terminal
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| pf:FAM198 | FAM198 protein
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| pf:FAT | FAT domain
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| pf:FKBP_N_2 | |
| pf:Fam20C | Golgi casein kinase, C-terminal, Fam20
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| pf:Fer4 | 4Fe-4S binding domain
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| pf:Fer4_10 | 4Fe-4S dicluster domain
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| pf:Fer4_13 | 4Fe-4S single cluster domain of Ferredoxin I
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| pf:Fer4_16 | 4Fe-4S double cluster binding domain
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| pf:Fer4_17 | 4Fe-4S dicluster domain
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| pf:Fer4_18 | 4Fe-4S dicluster domain
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| pf:Fer4_2 | 4Fe-4S binding domain
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| pf:Fer4_21 | 4Fe-4S dicluster domain
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| pf:Fer4_22 | 4Fe-4S dicluster domain
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| pf:Fer4_3 | 4Fe-4S binding domain
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| pf:Fer4_4 | 4Fe-4S binding domain
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| pf:Fer4_6 | 4Fe-4S binding domain
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| pf:Fer4_7 | 4Fe-4S dicluster domain
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| pf:Fer4_8 | 4Fe-4S dicluster domain
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| pf:Fer4_9 | 4Fe-4S dicluster domain
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| pf:Fis1_TPR_C | Fis1 C-terminal tetratricopeptide repeat
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| pf:Flavodoxin_3 | Flavodoxin domain
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| pf:Flavodoxin_5 | Flavodoxin domain
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| pf:FtsK_SpoIIIE | FtsK/SpoIIIE family
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| pf:GARS_A | Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
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| pf:GCP5-Mod21_C | |
| pf:GCP6_N | |
| pf:GCP_C_terminal | |
| pf:GCP_N_terminal | |
| pf:Glyco_hydro_2 | Glycosyl hydrolases family 2
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| pf:Glyco_hydro_2_C | Glycosyl hydrolases family 2, TIM barrel domain
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| pf:Glyco_hydro_2_N | Glycosyl hydrolases family 2, sugar binding domain
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| pf:Glyco_trans_1_4 | Glycosyl transferases group 1
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| pf:Glyco_trans_2_3 | Glycosyl transferase family group 2
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| pf:Glyco_transf_7C | N-terminal domain of galactosyltransferase
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| pf:Glycos_transf_1 | Glycosyl transferases group 1
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| pf:Glycos_transf_2 | Glycosyl transferase family 2
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| pf:Golgin_A5 | Golgin subfamily A member 5
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| pf:Guanylate_cyc | Adenylate and Guanylate cyclase catalytic domain
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| pf:HTH_1 | Bacterial regulatory helix-turn-helix protein, lysR family
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| pf:HTH_23 | Homeodomain-like domain
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| pf:HTH_3 | Helix-turn-helix
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| pf:HVO_2753_ZBP | |
| pf:Helicase_C | Helicase conserved C-terminal domain
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| pf:Kdo | Lipopolysaccharide kinase (Kdo/WaaP) family
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| pf:Kinase-like | Kinase-like
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| pf:LRRNT_2 | Leucine rich repeat N-terminal domain
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| pf:LRR_1 | Leucine Rich Repeat
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| pf:LRR_3 | Leucine Rich Repeat
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| pf:LRR_4 | Leucine Rich repeats (2 copies)
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| pf:LRR_6 | Leucine Rich repeat
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| pf:LRR_8 | Leucine rich repeat
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| pf:LysR_substrate | LysR substrate binding domain
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| pf:MIEAP | Mitochondria-eating protein
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| pf:MIF4G | MIF4G domain
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| pf:MIT | MIT (microtubule interacting and transport) domain
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| pf:MMR_HSR1 | 50S ribosome-binding GTPase
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| pf:MarR_2 | MarR family
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| pf:Methyltransf_11 | Methyltransferase domain
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| pf:Methyltransf_16 | Lysine methyltransferase
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| pf:Methyltransf_23 | Methyltransferase domain
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| pf:MxiM | Pilot protein MxiM
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| pf:NACHT | NACHT domain
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| pf:NB-ARC | NB-ARC domain
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| pf:NBCH_WD40 | |
| pf:NatA_aux_su | |
| pf:Omp85 | |
| pf:P-loop_SecA | |
| pf:PI3_PI4_kinase | Phosphatidylinositol 3- and 4-kinase
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| pf:PK_Tyr_Ser-Thr | |
| pf:POTRA | Surface antigen variable number repeat
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| pf:PX | PX domain
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| pf:PcfJ | PcfJ-like protein
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| pf:Peptidase_M54 | Peptidase family M54
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| pf:Peptidase_M57 | Dual-action HEIGH metallo-peptidase
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| pf:Peptidase_S9 | Prolyl oligopeptidase family
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| pf:Phage_Mu_F | Phage Mu protein F like protein
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| pf:Phage_portal_2 | Phage portal protein, lambda family
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| pf:Pkinase | Protein kinase domain
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| pf:Pkinase_fungal | |
| pf:PknG_TPR | Protein kinase G tetratricopeptide repeat
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| pf:Plug | TonB-dependent Receptor Plug Domain
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| pf:Pns11_12 | |
| pf:Porin_10 | Putative porin
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| pf:Proteasome | Proteasome subunit
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| pf:Pullul_strch_C | |
| pf:RIO1 | RIO1 family
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| pf:RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
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| pf:RRM_3 | RNA binding motif
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| pf:RRM_5 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
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| pf:RRM_occluded | Occluded RNA-recognition motif
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| pf:RabGAP-TBC | Rab-GTPase-TBC domain
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| pf:Rep_fac_C | Replication factor C C-terminal domain
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| pf:Reprolysin_4 | Metallo-peptidase family M12B Reprolysin-like
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| pf:ResIII | Type III restriction enzyme, res subunit
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| pf:Ribonuclease_P | Ribonuclease P
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| pf:RsgA_GTPase | |
| pf:SEC-C | SEC-C motif
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| pf:SHOCT | Short C-terminal domain
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| pf:SHOCT_2 | |
| pf:SHPRH_helical-1st | |
| pf:SKG6 | Transmembrane alpha-helix domain
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| pf:SMC_N | RecF/RecN/SMC N terminal domain
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| pf:SecA_DEAD | SecA DEAD-like domain
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| pf:SecA_PP_bind | SecA preprotein cross-linking domain
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| pf:SecA_SW | SecA Wing and Scaffold domain
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| pf:Shisa | Wnt and FGF inhibitory regulator
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| pf:Spidroin_N | |
| pf:T2SSE | Type II/IV secretion system protein
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| pf:TACC_C | |
| pf:TAN | Telomere-length maintenance and DNA damage repair
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| pf:TBPIP_C | |
| pf:TCAD9 | |
| pf:TFC3_eWH | |
| pf:TGT_C2 | Patch-forming domain C2 of tRNA-guanine transglycosylase
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| pf:THAP | THAP domain
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| pf:TIR | TIR domain
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| pf:TIR_2 | TIR domain
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| pf:TMEM154 | TMEM154 protein family
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| pf:TM_ErbB1 | |
| pf:TPR-S | |
| pf:TPR_1 | Tetratricopeptide repeat
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| pf:TPR_10 | Tetratricopeptide repeat
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| pf:TPR_11 | TPR repeat
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| pf:TPR_12 | Tetratricopeptide repeat
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| pf:TPR_14 | Tetratricopeptide repeat
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| pf:TPR_15 | Tetratricopeptide repeat
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| pf:TPR_16 | Tetratricopeptide repeat
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| pf:TPR_17 | Tetratricopeptide repeat
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| pf:TPR_19 | Tetratricopeptide repeat
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| pf:TPR_2 | Tetratricopeptide repeat
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| pf:TPR_6 | Tetratricopeptide repeat
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| pf:TPR_8 | Tetratricopeptide repeat
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| pf:TPR_9 | Tetratricopeptide repeat
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| pf:TbpB_B_D | |
| pf:TniB | Bacterial TniB protein
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| pf:TonB_dep_Rec | TonB dependent receptor
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| pf:Transgly | Transglycosylase
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| pf:TsaE | Threonylcarbamoyl adenosine biosynthesis protein TsaE
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| pf:UTP20_C | |
| pf:UTP20_N | |
| pf:Utp13 | Utp13 specific WD40 associated domain
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| pf:Vhr1 | Transcription factor Vhr1
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| pf:WD40 | WD domain, G-beta repeat
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| pf:XhlA | Haemolysin XhlA
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| pf:YodL | YodL-like
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| pf:cobW | CobW/HypB/UreG, nucleotide-binding domain
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| pf:nSTAND1 | |
| pf:nSTAND3 | |
| pf:pulA_all-beta | |
| pf:tRNA-synt_2 | tRNA synthetases class II (D, K and N)
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| pf:tRNA-synt_2d | tRNA synthetases class II core domain (F)
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| pf:tRNA_anti-codon | OB-fold nucleic acid binding domain
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| pf:zf-4CXXC_R1 | Zinc-finger domain of monoamine-oxidase A repressor R1
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| pf:zf-C2H2_aberr | Aberrant zinc-finger
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| pf:zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding
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| pf:zf-met | Zinc-finger of C2H2 type
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| pf:zinc_ribbon_4 | zinc-ribbon domain
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